RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 HABP2Q14520 560 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 KIF22Q14807 665 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 TBR1Q16650 682 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 ZNF568Q3ZCX4 644 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 MFSD14BQ5SR56 506 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 CIAPIN1Q6FI81 312 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 HIBCHQ6NVY1 386 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 ZNF783Q6ZMS7 281 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 APBB1IPQ7Z5R6 666 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 SMAP1Q8IYB5 467 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 CPXCR1Q8N123 301 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 CARFQ8N187 725 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 CCDC33Q8N5R6 958 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 CELF5Q8N6W0 485 aaKnown RBP6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 NLGN4YQ8NFZ3 816 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 OR5M3Q8NGP4 307 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 TRIM43Q96BQ3 446 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 MBD6Q96DN6 1003 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 GPHA2Q96T91 129 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 C1orf43Q9BWL3 253 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 KCNH6Q9H252 994 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 ADAM7Q9H2U9 754 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 FAM30AQ9NZY2 134 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 LUZP4Q9P127 313 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 COL20A1Q9P218 1284 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 CFAP97Q9P2B7 532 aa6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 RUVBL1Q9Y265 456 aaKnown RBP6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 MORC2Q9Y6X9 1032 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P46-201ENST00000520062 A0A087WV62 115 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 hCG_1642624A0A1W2PR95 340 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 F8W8V4 182 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 WNT10BO00744 389 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 SLC43A1O75387 559 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 THP07101 528 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 RAP2AP10114 183 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 ATP5JP18859 108 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 PI3P19957 117 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 TECP42680 631 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 NPEPPSP55786 919 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 MRPL49Q13405 166 aaKnown RBP6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 PMS2P11Q13670 270 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 SSPNQ14714 243 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 SLC44A4Q53GD3 710 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 CCDC93Q567U6 631 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 MCTP2Q6DN12 878 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 SYDE1Q6ZW31 735 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 PDSS2Q86YH6 399 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 LIX1LQ8IVB5 337 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 ATP11CQ8NB49 1132 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 SPATA5Q8NB90 893 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 FBXO18Q8NFZ0 1043 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 OR14K1Q8NGZ2 314 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 ZSCAN18Q8TBC5 510 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 ADAMTS17Q8TE56 1095 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 PNISRQ8TF01 805 aaKnown RBP6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 TNPO1Q92973 898 aaKnown RBP6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 CEP95Q96GE4 821 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 BORCS6Q96GS4 357 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 LCORQ96JN0 433 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 P2RX7Q99572 595 aaKnown RBP6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 PACSIN1Q9BY11 444 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 IL23AQ9NPF7 189 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 JKAMPQ9P055 326 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 SLC23A1Q9UHI7 598 aa6.43□□□□□ -1.38
HMGB1P46-201ENST00000520062 B5MCH6 92 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 BTN3A1O00481 513 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 SLC26A4O43511 780 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 PPFIA4O75335 1185 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 ABHD16AO95870 558 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 ANXA1P04083 346 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 SNRPA1P09661 255 aaKnown RBP6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 HDCP19113 662 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 GRK6P43250 576 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 HTRA4P83105 476 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 ICA1Q05084 483 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 EXOSC9Q06265 439 aaKnown RBP6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 POU5F1BQ06416 359 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 TRIM14Q14142 442 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 TUBB8Q3ZCM7 444 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 TLDC1Q6P9B6 456 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 FRMD5Q7Z6J6 570 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 ADGRE4PQ86SQ3 457 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 SYTL1Q8IYJ3 562 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 RPL10LQ96L21 214 aaKnown RBP6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 SCLT1Q96NL6 688 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 MRI1Q9BV20 369 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 TTLL2Q9BWV7 592 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 ZNF518BQ9C0D4 1074 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 BRD9Q9H8M2 597 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 SMURF2Q9HAU4 748 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 AGO4Q9HCK5 861 aaKnown RBP6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 SACM1LQ9NTJ5 587 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 MYO1AQ9UBC5 1043 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 SRRDQ9UH36 339 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 CDC23Q9UJX2 597 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 CNOT6Q9ULM6 557 aaKnown RBP6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 ZDHHC9Q9Y397 364 aa6.42□□□□□ -1.38
HMGB1P46-201ENST00000520062 NR2E1Q9Y466 385 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms