RNA–Protein interactions for RNA: ENST00000520003.5

CSGALNACT1-208, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 4

Gene CSGALNACT1, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-208ENST00000520003 CENPBP07199 599 aaPredicted RBP17.24■□□□□ 0.35
CSGALNACT1-208ENST00000520003 CEBPBP17676 345 aa17.24■□□□□ 0.35
CSGALNACT1-208ENST00000520003 FXR2P51116 673 aaKnown RBP eCLIP17.24■□□□□ 0.35
CSGALNACT1-208ENST00000520003 ROR1Q01973 937 aa17.24■□□□□ 0.35
CSGALNACT1-208ENST00000520003 MTAPQ13126 283 aa17.24■□□□□ 0.35
CSGALNACT1-208ENST00000520003 GLRA4Q5JXX5 417 aa17.24■□□□□ 0.35
CSGALNACT1-208ENST00000520003 PRSS36Q5K4E3 855 aa17.24■□□□□ 0.35
CSGALNACT1-208ENST00000520003 TTC38Q5R3I4 469 aa17.24■□□□□ 0.35
CSGALNACT1-208ENST00000520003 HAUS3Q68CZ6 603 aa17.24■□□□□ 0.35
CSGALNACT1-208ENST00000520003 TSSK4Q6SA08 328 aa17.24■□□□□ 0.35
CSGALNACT1-208ENST00000520003 ZNF461Q8TAF7 563 aa17.24■□□□□ 0.35
CSGALNACT1-208ENST00000520003 DEPTORQ8TB45 409 aa17.24■□□□□ 0.35
CSGALNACT1-208ENST00000520003 CNTNAP3BQ96NU0 1288 aa17.24■□□□□ 0.35
CSGALNACT1-208ENST00000520003 CNTNAP3Q9BZ76 1288 aa17.24■□□□□ 0.35
CSGALNACT1-208ENST00000520003 POLD4Q9HCU8 107 aa17.24■□□□□ 0.35
CSGALNACT1-208ENST00000520003 MRPS17Q9Y2R5 130 aaKnown RBP17.24■□□□□ 0.35
CSGALNACT1-208ENST00000520003 GDAQ9Y2T3 454 aa17.24■□□□□ 0.35
CSGALNACT1-208ENST00000520003 CACNA1BQ00975 2339 aa17.24■□□□□ 0.35
CSGALNACT1-208ENST00000520003 TPRP12270 2363 aaKnown RBP17.23■□□□□ 0.35
CSGALNACT1-208ENST00000520003 KMT2BQ9UMN6 2715 aaPredicted RBP17.23■□□□□ 0.35
CSGALNACT1-208ENST00000520003 PRR5-ARHGAP8B1AHC4 643 aa17.23■□□□□ 0.35
CSGALNACT1-208ENST00000520003 MICAL2O94851 1124 aa17.23■□□□□ 0.35
CSGALNACT1-208ENST00000520003 PTPN2P17706 415 aa17.23■□□□□ 0.35
CSGALNACT1-208ENST00000520003 TRAPPC10P48553 1259 aa17.23■□□□□ 0.35
CSGALNACT1-208ENST00000520003 ARHGAP8P85298 464 aa17.23■□□□□ 0.35
CSGALNACT1-208ENST00000520003 LMNB2Q03252 620 aa17.23■□□□□ 0.35
CSGALNACT1-208ENST00000520003 NBR1Q14596 966 aa17.23■□□□□ 0.35
CSGALNACT1-208ENST00000520003 PPP2R5AQ15172 486 aa17.23■□□□□ 0.35
CSGALNACT1-208ENST00000520003 XKR4Q5GH76 650 aa17.23■□□□□ 0.35
CSGALNACT1-208ENST00000520003 NT5DC1Q5TFE4 455 aa17.23■□□□□ 0.35
CSGALNACT1-208ENST00000520003 SECISBP2LQ93073 1101 aaKnown RBP17.23■□□□□ 0.35
CSGALNACT1-208ENST00000520003 BHMT2Q9H2M3 363 aa17.23■□□□□ 0.35
CSGALNACT1-208ENST00000520003 CHRDQ9H2X0 955 aa17.23■□□□□ 0.35
CSGALNACT1-208ENST00000520003 GOLGA2P5Q9HBQ8 144 aa17.23■□□□□ 0.35
CSGALNACT1-208ENST00000520003 COL4A2P08572 1712 aa17.22■□□□□ 0.35
CSGALNACT1-208ENST00000520003 WDR27A2RRH5 827 aa17.22■□□□□ 0.35
CSGALNACT1-208ENST00000520003 I3L4J1 428 aa17.22■□□□□ 0.35
CSGALNACT1-208ENST00000520003 NRG2O14511 850 aaPredicted RBP17.22■□□□□ 0.35
CSGALNACT1-208ENST00000520003 TRAPPC3O43617 180 aa17.22■□□□□ 0.35
CSGALNACT1-208ENST00000520003 LIG1P18858 919 aa17.22■□□□□ 0.35
CSGALNACT1-208ENST00000520003 CCT6AP40227 531 aaKnown RBP17.22■□□□□ 0.35
CSGALNACT1-208ENST00000520003 BRCC3P46736 316 aa17.22■□□□□ 0.35
CSGALNACT1-208ENST00000520003 EFNA5P52803 228 aa17.22■□□□□ 0.35
CSGALNACT1-208ENST00000520003 HMGN5P82970 282 aaKnown RBP17.22■□□□□ 0.35
CSGALNACT1-208ENST00000520003 SOX4Q06945 474 aaPredicted RBP17.22■□□□□ 0.35
CSGALNACT1-208ENST00000520003 TMEM132AQ24JP5 1023 aa17.22■□□□□ 0.35
CSGALNACT1-208ENST00000520003 ALKAL1Q6UXT8 129 aa17.22■□□□□ 0.35
CSGALNACT1-208ENST00000520003 TCEAL8Q8IYN2 117 aa17.22■□□□□ 0.35
CSGALNACT1-208ENST00000520003 IGSF22Q8N9C0 903 aa17.22■□□□□ 0.35
CSGALNACT1-208ENST00000520003 KIFAP3Q92845 792 aa17.22■□□□□ 0.35
CSGALNACT1-208ENST00000520003 KIF2CQ99661 725 aa17.22■□□□□ 0.35
CSGALNACT1-208ENST00000520003 PARD6AQ9NPB6 346 aa17.22■□□□□ 0.35
CSGALNACT1-208ENST00000520003 TRPV5Q9NQA5 729 aa17.22■□□□□ 0.35
CSGALNACT1-208ENST00000520003 PDCD11Q14690 1871 aaKnown RBP17.22■□□□□ 0.35
CSGALNACT1-208ENST00000520003 SPTBN2O15020 2390 aa17.22■□□□□ 0.35
CSGALNACT1-208ENST00000520003 SMIM28A0A1B0GU29 152 aa17.21■□□□□ 0.35
CSGALNACT1-208ENST00000520003 ATF2P15336 505 aa17.21■□□□□ 0.35
CSGALNACT1-208ENST00000520003 U2AF2P26368 475 aaKnown RBP eCLIP17.21■□□□□ 0.35
CSGALNACT1-208ENST00000520003 CCR2P41597 374 aa17.21■□□□□ 0.35
CSGALNACT1-208ENST00000520003 TOB1P50616 345 aaPredicted RBP17.21■□□□□ 0.35
CSGALNACT1-208ENST00000520003 MRPL58Q14197 206 aaKnown RBP17.21■□□□□ 0.35
CSGALNACT1-208ENST00000520003 FAM78AQ5JUQ0 283 aa17.21■□□□□ 0.35
CSGALNACT1-208ENST00000520003 ATF7IP2Q5U623 682 aa17.21■□□□□ 0.35
CSGALNACT1-208ENST00000520003 MAP4K3Q8IVH8 894 aa17.21■□□□□ 0.35
CSGALNACT1-208ENST00000520003 TCEAL4Q96EI5 215 aa17.21■□□□□ 0.35
CSGALNACT1-208ENST00000520003 IFT74Q96LB3 600 aa17.21■□□□□ 0.35
CSGALNACT1-208ENST00000520003 ASB16Q96NS5 453 aa17.21■□□□□ 0.35
CSGALNACT1-208ENST00000520003 IER2Q9BTL4 223 aa17.21■□□□□ 0.35
CSGALNACT1-208ENST00000520003 LRWD1Q9UFC0 647 aa17.21■□□□□ 0.35
CSGALNACT1-208ENST00000520003 KIAA1024Q9UPX6 916 aa17.21■□□□□ 0.35
CSGALNACT1-208ENST00000520003 TNFSF13BQ9Y275 285 aa17.21■□□□□ 0.35
CSGALNACT1-208ENST00000520003 F5P12259 2224 aa17.21■□□□□ 0.35
CSGALNACT1-208ENST00000520003 CITO14578 2027 aa17.21■□□□□ 0.35
CSGALNACT1-208ENST00000520003 ACACBO00763 2458 aa17.21■□□□□ 0.34
CSGALNACT1-208ENST00000520003 MAN2B1O00754 1011 aa17.2■□□□□ 0.34
CSGALNACT1-208ENST00000520003 SEC24AO95486 1093 aa17.2■□□□□ 0.34
CSGALNACT1-208ENST00000520003 LRG1P02750 347 aa17.2■□□□□ 0.34
CSGALNACT1-208ENST00000520003 GRM5P41594 1212 aa17.2■□□□□ 0.34
CSGALNACT1-208ENST00000520003 PDIA5Q14554 519 aa17.2■□□□□ 0.34
CSGALNACT1-208ENST00000520003 DAW1Q8N136 415 aa17.2■□□□□ 0.34
CSGALNACT1-208ENST00000520003 CEP120Q8N960 986 aa17.2■□□□□ 0.34
CSGALNACT1-208ENST00000520003 RTKNQ9BST9 563 aa17.2■□□□□ 0.34
CSGALNACT1-208ENST00000520003 ZFP14Q9HCL3 533 aa17.2■□□□□ 0.34
CSGALNACT1-208ENST00000520003 PTPRHQ9HD43 1115 aa17.2■□□□□ 0.34
CSGALNACT1-208ENST00000520003 DDX19AQ9NUU7 478 aaKnown RBP17.2■□□□□ 0.34
CSGALNACT1-208ENST00000520003 CDV3Q9UKY7 258 aaKnown RBP17.2■□□□□ 0.34
CSGALNACT1-208ENST00000520003 PHLPP2Q6ZVD8 1323 aa17.2■□□□□ 0.34
CSGALNACT1-208ENST00000520003 E9PMD0 336 aa17.19■□□□□ 0.34
CSGALNACT1-208ENST00000520003 SYN3O14994 580 aa17.19■□□□□ 0.34
CSGALNACT1-208ENST00000520003 MOSPD3O75425 235 aa17.19■□□□□ 0.34
CSGALNACT1-208ENST00000520003 KRT37O76014 449 aa17.19■□□□□ 0.34
CSGALNACT1-208ENST00000520003 GRM2Q14416 872 aa17.19■□□□□ 0.34
CSGALNACT1-208ENST00000520003 VITQ6UXI7 678 aa17.19■□□□□ 0.34
CSGALNACT1-208ENST00000520003 TAS1R3Q7RTX0 852 aa17.19■□□□□ 0.34
CSGALNACT1-208ENST00000520003 SNX29Q8TEQ0 813 aa17.19■□□□□ 0.34
CSGALNACT1-208ENST00000520003 ZSCAN31Q96LW9 406 aaPredicted RBP17.19■□□□□ 0.34
CSGALNACT1-208ENST00000520003 ZMAT2Q96NC0 199 aaKnown RBP17.19■□□□□ 0.34
CSGALNACT1-208ENST00000520003 CORO1BQ9BR76 489 aa17.19■□□□□ 0.34
CSGALNACT1-208ENST00000520003 TRMT61BQ9BVS5 477 aaKnown RBP17.19■□□□□ 0.34
CSGALNACT1-208ENST00000520003 CDT1Q9H211 546 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms