RNA–Protein interactions for RNA: ENST00000519835.5

CPEB4-207, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-207ENST00000519835 MAEAQ7L5Y9 396 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 VSIG1Q86XK7 387 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 ZNF677Q86XU0 584 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 TDRPQ86YL5 185 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 SPICE1Q8N0Z3 855 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 ZCCHC9Q8N567 271 aaKnown RBP12.72□□□□□ -0.37
CPEB4-207ENST00000519835 ANKLE1Q8NAG6 615 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 TMC2Q8TDI7 906 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 TMEM237Q96Q45 408 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 PPCSQ9HAB8 311 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 SMG5Q9UPR3 1016 aaKnown RBP12.72□□□□□ -0.37
CPEB4-207ENST00000519835 SCN9AQ15858 1988 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 MROH7Q68CQ1 1323 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 CLGNO14967 610 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 GRIN3BO60391 1043 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 ZC3H11AO75152 810 aaKnown RBP eCLIP12.72□□□□□ -0.37
CPEB4-207ENST00000519835 ENTPD3O75355 529 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 RRM1P23921 792 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 ALDH3A1P30838 453 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 FOXN2P32314 431 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 IRX1P78414 480 aaPredicted RBP12.72□□□□□ -0.37
CPEB4-207ENST00000519835 GCNT1Q02742 428 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 ENPEPQ07075 957 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 SPARCL1Q14515 664 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 GRIPAP1Q4V328 841 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 CCDC174Q6PII3 467 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 NIPA1Q7RTP0 329 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 TRABD2AQ86V40 505 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 KIAA0825Q8IV33 1275 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 MCOLN2Q8IZK6 566 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 CHURC1Q8WUH1 139 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 TMX4Q9H1E5 349 aaPredicted RBP12.72□□□□□ -0.37
CPEB4-207ENST00000519835 MYLK2Q9H1R3 596 aa12.72□□□□□ -0.37
CPEB4-207ENST00000519835 EXOC1LA0A1B0GW35 172 aa12.71□□□□□ -0.37
CPEB4-207ENST00000519835 DDX39AO00148 427 aaKnown RBP12.71□□□□□ -0.37
CPEB4-207ENST00000519835 NDC80O14777 642 aa12.71□□□□□ -0.37
CPEB4-207ENST00000519835 SMNDC1O75940 238 aaKnown RBP eCLIP12.71□□□□□ -0.37
CPEB4-207ENST00000519835 ASMTLO95671 621 aa12.71□□□□□ -0.37
CPEB4-207ENST00000519835 UNGP13051 313 aaPredicted RBP12.71□□□□□ -0.37
CPEB4-207ENST00000519835 CALRP27797 417 aaKnown RBP12.71□□□□□ -0.37
CPEB4-207ENST00000519835 VPS41P49754 854 aa12.71□□□□□ -0.37
CPEB4-207ENST00000519835 RASSF2P50749 326 aa12.71□□□□□ -0.37
CPEB4-207ENST00000519835 CBWD2Q8IUF1 395 aa12.71□□□□□ -0.37
CPEB4-207ENST00000519835 KIRREL3Q8IZU9 778 aa12.71□□□□□ -0.37
CPEB4-207ENST00000519835 TEX9Q8N6V9 391 aa12.71□□□□□ -0.37
CPEB4-207ENST00000519835 PARD3BQ8TEW8 1205 aa12.71□□□□□ -0.37
CPEB4-207ENST00000519835 MAML1Q92585 1016 aa12.71□□□□□ -0.37
CPEB4-207ENST00000519835 ERP27Q96DN0 273 aa12.71□□□□□ -0.37
CPEB4-207ENST00000519835 RNPEPL1Q9HAU8 725 aa12.71□□□□□ -0.37
CPEB4-207ENST00000519835 RAB20Q9NX57 234 aa12.71□□□□□ -0.37
CPEB4-207ENST00000519835 RPL26L1Q9UNX3 145 aaKnown RBP12.71□□□□□ -0.37
CPEB4-207ENST00000519835 TRIM33Q9UPN9 1127 aa12.71□□□□□ -0.37
CPEB4-207ENST00000519835 ZHX2Q9Y6X8 837 aa12.71□□□□□ -0.37
CPEB4-207ENST00000519835 ARID2Q68CP9 1835 aa12.71□□□□□ -0.38
CPEB4-207ENST00000519835 CCDC189A1A4V9 331 aa12.71□□□□□ -0.38
CPEB4-207ENST00000519835 GOLGA8IPA6NC78 632 aa12.71□□□□□ -0.38
CPEB4-207ENST00000519835 GOLGA8JA6NMD2 632 aa12.71□□□□□ -0.38
CPEB4-207ENST00000519835 PROSCO94903 275 aa12.71□□□□□ -0.38
CPEB4-207ENST00000519835 KRT5P13647 590 aa12.71□□□□□ -0.38
CPEB4-207ENST00000519835 MAGEA4P43358 317 aa12.71□□□□□ -0.38
CPEB4-207ENST00000519835 QARSP47897 775 aaKnown RBP12.71□□□□□ -0.38
CPEB4-207ENST00000519835 WDR4P57081 412 aaKnown RBP12.71□□□□□ -0.38
CPEB4-207ENST00000519835 MOGSQ13724 837 aa12.71□□□□□ -0.38
CPEB4-207ENST00000519835 BLMHQ13867 455 aa12.71□□□□□ -0.38
CPEB4-207ENST00000519835 LLGL1Q15334 1064 aa12.71□□□□□ -0.38
CPEB4-207ENST00000519835 TAF11Q15544 211 aa12.71□□□□□ -0.38
CPEB4-207ENST00000519835 AOC3Q16853 763 aa12.71□□□□□ -0.38
CPEB4-207ENST00000519835 CMPK2Q5EBM0 449 aa12.71□□□□□ -0.38
CPEB4-207ENST00000519835 TMEM63BQ5T3F8 832 aa12.71□□□□□ -0.38
CPEB4-207ENST00000519835 STRIP1Q5VSL9 837 aa12.71□□□□□ -0.38
CPEB4-207ENST00000519835 FAM47EQ6ZV65 393 aa12.71□□□□□ -0.38
CPEB4-207ENST00000519835 RHOT1Q8IXI2 618 aa12.71□□□□□ -0.38
CPEB4-207ENST00000519835 KATNAL2Q8IYT4 538 aa12.71□□□□□ -0.38
CPEB4-207ENST00000519835 ZSWIM2Q8NEG5 633 aa12.71□□□□□ -0.38
CPEB4-207ENST00000519835 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.71□□□□□ -0.38
CPEB4-207ENST00000519835 SH3TC2Q8TF17 1288 aa12.71□□□□□ -0.38
CPEB4-207ENST00000519835 C9orf72Q96LT7 481 aa12.71□□□□□ -0.38
CPEB4-207ENST00000519835 LRRC37BQ96QE4 947 aa12.71□□□□□ -0.38
CPEB4-207ENST00000519835 RBM15Q96T37 977 aaKnown RBP eCLIP12.71□□□□□ -0.383e-8■■■□□ 15.8
CPEB4-207ENST00000519835 HERPUD2Q9BSE4 406 aa12.71□□□□□ -0.38
CPEB4-207ENST00000519835 SERPINA10Q9UK55 444 aa12.71□□□□□ -0.38
CPEB4-207ENST00000519835 CORO1CQ9ULV4 474 aaPredicted RBP12.71□□□□□ -0.38
CPEB4-207ENST00000519835 PHTF1Q9UMS5 762 aa12.71□□□□□ -0.38
CPEB4-207ENST00000519835 R3HDM2Q9Y2K5 976 aaKnown RBP12.71□□□□□ -0.38
CPEB4-207ENST00000519835 FOXO6A8MYZ6 492 aa12.7□□□□□ -0.38
CPEB4-207ENST00000519835 PPP1R12AO14974 1030 aaPredicted RBP12.7□□□□□ -0.38
CPEB4-207ENST00000519835 SLC16A4O15374 487 aa12.7□□□□□ -0.38
CPEB4-207ENST00000519835 ECM2O94769 699 aaPredicted RBP12.7□□□□□ -0.38
CPEB4-207ENST00000519835 RALAP11233 206 aa12.7□□□□□ -0.38
CPEB4-207ENST00000519835 NPR1P16066 1061 aa12.7□□□□□ -0.38
CPEB4-207ENST00000519835 CETN2P41208 172 aa12.7□□□□□ -0.38
CPEB4-207ENST00000519835 NSFP46459 744 aaKnown RBP12.7□□□□□ -0.38
CPEB4-207ENST00000519835 PDK4Q16654 411 aa12.7□□□□□ -0.38
CPEB4-207ENST00000519835 CAPRIN2Q6IMN6 1127 aaKnown RBP12.7□□□□□ -0.38
CPEB4-207ENST00000519835 FAM160B2Q86V87 743 aa12.7□□□□□ -0.38
CPEB4-207ENST00000519835 MAP4K3Q8IVH8 894 aa12.7□□□□□ -0.38
CPEB4-207ENST00000519835 CCDC127Q96BQ5 260 aa12.7□□□□□ -0.38
CPEB4-207ENST00000519835 DEFB129Q9H1M3 183 aa12.7□□□□□ -0.38
CPEB4-207ENST00000519835 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.7□□□□□ -0.389e-18■■■■■ 223.6
CPEB4-207ENST00000519835 C1orf112Q9NSG2 853 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms