RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 VPS37CA5D8V6 355 aaPredicted RBP27.63■■■□□ 2.01
VEGFA-220ENST00000519767 CCL16O15467 120 aa27.63■■■□□ 2.01
VEGFA-220ENST00000519767 FAM13AO94988 1023 aa27.63■■■□□ 2.01
VEGFA-220ENST00000519767 KRT18P05783 430 aaKnown RBP27.63■■■□□ 2.01
VEGFA-220ENST00000519767 DDIT3P35638 169 aa27.63■■■□□ 2.01
VEGFA-220ENST00000519767 CACNB1Q02641 598 aaPredicted RBP27.63■■■□□ 2.01
VEGFA-220ENST00000519767 DHX8Q14562 1220 aaKnown RBP27.63■■■□□ 2.01
VEGFA-220ENST00000519767 TMEM105Q8N8V8 129 aa27.63■■■□□ 2.01
VEGFA-220ENST00000519767 RAD54LQ92698 747 aa27.63■■■□□ 2.01
VEGFA-220ENST00000519767 CCSER1Q9C0I3 900 aa27.63■■■□□ 2.01
VEGFA-220ENST00000519767 CDH7Q9ULB5 785 aa27.63■■■□□ 2.01
VEGFA-220ENST00000519767 TBX20Q9UMR3 447 aa27.63■■■□□ 2.01
VEGFA-220ENST00000519767 POLIQ9UNA4 740 aa27.63■■■□□ 2.01
VEGFA-220ENST00000519767 ZFHX2Q9C0A1 2572 aaPredicted RBP27.62■■■□□ 2.01
VEGFA-220ENST00000519767 SRFP11831 508 aa27.62■■■□□ 2.01
VEGFA-220ENST00000519767 PLCG1P19174 1290 aa27.62■■■□□ 2.01
VEGFA-220ENST00000519767 LIG4P49917 911 aa27.62■■■□□ 2.01
VEGFA-220ENST00000519767 KARSQ15046 597 aaKnown RBP27.62■■■□□ 2.01
VEGFA-220ENST00000519767 VARS2Q5ST30 1063 aaKnown RBP27.62■■■□□ 2.01
VEGFA-220ENST00000519767 SIX5Q8N196 739 aa27.62■■■□□ 2.01
VEGFA-220ENST00000519767 APPL2Q8NEU8 664 aa27.62■■■□□ 2.01
VEGFA-220ENST00000519767 FLCNQ8NFG4 579 aa27.62■■■□□ 2.01
VEGFA-220ENST00000519767 RTP3Q9BQQ7 232 aa27.62■■■□□ 2.01
VEGFA-220ENST00000519767 KCNH3Q9ULD8 1083 aa27.62■■■□□ 2.01
VEGFA-220ENST00000519767 MEFVO15553 781 aaPredicted RBP27.61■■■□□ 2.01
VEGFA-220ENST00000519767 TRAK2O60296 914 aa27.61■■■□□ 2.01
VEGFA-220ENST00000519767 TBC1D4O60343 1298 aa27.61■■■□□ 2.01
VEGFA-220ENST00000519767 ABLIM3O94929 683 aa27.61■■■□□ 2.01
VEGFA-220ENST00000519767 PIGRP01833 764 aa27.61■■■□□ 2.01
VEGFA-220ENST00000519767 ELF1P32519 619 aa27.61■■■□□ 2.01
VEGFA-220ENST00000519767 HTR4Q13639 388 aa27.61■■■□□ 2.01
VEGFA-220ENST00000519767 MRPL58Q14197 206 aaKnown RBP27.61■■■□□ 2.01
VEGFA-220ENST00000519767 MCM6Q14566 821 aa27.61■■■□□ 2.01
VEGFA-220ENST00000519767 SEZ6Q53EL9 994 aa27.61■■■□□ 2.01
VEGFA-220ENST00000519767 ATOH1Q92858 354 aaPredicted RBP27.61■■■□□ 2.01
VEGFA-220ENST00000519767 SUSD3Q96L08 255 aa27.61■■■□□ 2.01
VEGFA-220ENST00000519767 MAFFQ9ULX9 164 aa27.61■■■□□ 2.01
VEGFA-220ENST00000519767 TTC26A0AVF1 554 aa27.6■■■□□ 2.01
VEGFA-220ENST00000519767 HNRNPDLO14979 420 aaKnown RBP27.6■■■□□ 2.01
VEGFA-220ENST00000519767 NARSO43776 548 aaKnown RBP27.6■■■□□ 2.01
VEGFA-220ENST00000519767 CYP3A5P20815 502 aa27.6■■■□□ 2.01
VEGFA-220ENST00000519767 TPGS2Q68CL5 300 aa27.6■■■□□ 2.01
VEGFA-220ENST00000519767 LARP4BQ92615 738 aaKnown RBP27.6■■■□□ 2.01
VEGFA-220ENST00000519767 CCDC39Q9UFE4 941 aa27.6■■■□□ 2.01
VEGFA-220ENST00000519767 TRIP11Q15643 1979 aa27.59■■■□□ 2.01
VEGFA-220ENST00000519767 XPOTO43592 962 aaKnown RBP27.59■■■□□ 2.01
VEGFA-220ENST00000519767 TBCAO75347 108 aaKnown RBP27.59■■■□□ 2.01
VEGFA-220ENST00000519767 CFHP08603 1231 aa27.59■■■□□ 2.01
VEGFA-220ENST00000519767 CXCL8P10145 99 aa27.59■■■□□ 2.01
VEGFA-220ENST00000519767 ATF2P15336 505 aa27.59■■■□□ 2.01
VEGFA-220ENST00000519767 NPR3P17342 541 aa27.59■■■□□ 2.01
VEGFA-220ENST00000519767 AOC1P19801 751 aa27.59■■■□□ 2.01
VEGFA-220ENST00000519767 MARCKSP29966 332 aaPredicted RBP27.59■■■□□ 2.01
VEGFA-220ENST00000519767 MCM4P33991 863 aa27.59■■■□□ 2.01
VEGFA-220ENST00000519767 NTHL1P78549 312 aa27.59■■■□□ 2.01
VEGFA-220ENST00000519767 GRIN1Q05586 938 aa27.59■■■□□ 2.01
VEGFA-220ENST00000519767 ZBTB6Q15916 424 aa27.59■■■□□ 2.01
VEGFA-220ENST00000519767 MTSS1LQ765P7 747 aa27.59■■■□□ 2.01
VEGFA-220ENST00000519767 LRRC15Q8TF66 581 aa27.59■■■□□ 2.01
VEGFA-220ENST00000519767 FGF13Q92913 245 aa27.59■■■□□ 2.01
VEGFA-220ENST00000519767 INTS4Q96HW7 963 aaKnown RBP27.59■■■□□ 2.01
VEGFA-220ENST00000519767 HAPLN2Q9GZV7 340 aa27.59■■■□□ 2.01
VEGFA-220ENST00000519767 KMT2EQ8IZD2 1858 aa27.59■■■□□ 2.01
VEGFA-220ENST00000519767 ARHGEF37A1IGU5 675 aa27.58■■■□□ 2.01
VEGFA-220ENST00000519767 H0Y858 1186 aa27.58■■■□□ 2.01
VEGFA-220ENST00000519767 K7ENM7 598 aa27.58■■■□□ 2.01
VEGFA-220ENST00000519767 OGTO15294 1046 aa27.58■■■□□ 2.01
VEGFA-220ENST00000519767 GTF2BQ00403 316 aa27.58■■■□□ 2.01
VEGFA-220ENST00000519767 ROR1Q01973 937 aa27.58■■■□□ 2.01
VEGFA-220ENST00000519767 PPP2R3AQ06190 1150 aa27.58■■■□□ 2.01
VEGFA-220ENST00000519767 PABPC1LQ4VXU2 614 aaKnown RBP27.58■■■□□ 2.01
VEGFA-220ENST00000519767 CD302Q8IX05 232 aa27.58■■■□□ 2.01
VEGFA-220ENST00000519767 TCEAL8Q8IYN2 117 aa27.58■■■□□ 2.01
VEGFA-220ENST00000519767 KRI1Q8N9T8 703 aaKnown RBP27.58■■■□□ 2.01
VEGFA-220ENST00000519767 KIF12Q96FN5 646 aa27.58■■■□□ 2.01
VEGFA-220ENST00000519767 ZHX3Q9H4I2 956 aa27.58■■■□□ 2.01
VEGFA-220ENST00000519767 SLC2A4RGQ9NR83 387 aa27.58■■■□□ 2.01
VEGFA-220ENST00000519767 DNMT3BQ9UBC3 853 aaKnown RBP27.58■■■□□ 2.01
VEGFA-220ENST00000519767 FBXL5Q9UKA1 691 aa27.58■■■□□ 2.01
VEGFA-220ENST00000519767 UBQLN1Q9UMX0 589 aaKnown RBP27.58■■■□□ 2.01
VEGFA-220ENST00000519767 SRPRBQ9Y5M8 271 aaKnown RBP27.58■■■□□ 2.01
VEGFA-220ENST00000519767 CLIC4Q9Y696 253 aa27.58■■■□□ 2.01
VEGFA-220ENST00000519767 NUMBLQ9Y6R0 609 aa27.58■■■□□ 2.01
VEGFA-220ENST00000519767 A0A0B4J269 797 aa27.57■■■□□ 2
VEGFA-220ENST00000519767 PRRG1O14668 218 aa27.57■■■□□ 2
VEGFA-220ENST00000519767 SYT1P21579 422 aa27.57■■■□□ 2
VEGFA-220ENST00000519767 LRPAP1P30533 357 aa27.57■■■□□ 2
VEGFA-220ENST00000519767 PTPAQ15257 358 aa27.57■■■□□ 2
VEGFA-220ENST00000519767 CTXN3Q4LDR2 81 aa27.57■■■□□ 2
VEGFA-220ENST00000519767 EPSTI1Q96J88 318 aa27.57■■■□□ 2
VEGFA-220ENST00000519767 PHOX2BQ99453 314 aa27.57■■■□□ 2
VEGFA-220ENST00000519767 OXCT2Q9BYC2 517 aaPredicted RBP27.57■■■□□ 2
VEGFA-220ENST00000519767 RPF1Q9H9Y2 349 aaKnown RBP27.57■■■□□ 2
VEGFA-220ENST00000519767 AVENQ9NQS1 362 aaPredicted RBP27.57■■■□□ 2
VEGFA-220ENST00000519767 STK17AQ9UEE5 414 aa27.57■■■□□ 2
VEGFA-220ENST00000519767 PCDHB8Q9UN66 801 aa27.57■■■□□ 2
VEGFA-220ENST00000519767 VWA8A3KMH1 1905 aa27.57■■■□□ 2
VEGFA-220ENST00000519767 LACTBL1A8MY62 500 aa27.56■■■□□ 2
VEGFA-220ENST00000519767 STK25O00506 426 aa27.56■■■□□ 2
VEGFA-220ENST00000519767 LRG1P02750 347 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms