RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 NUP85Q9BW27 656 aa28.43■■■□□ 2.14
COL13A1-210ENST00000517713 UBXN6Q9BZV1 441 aa28.43■■■□□ 2.14
COL13A1-210ENST00000517713 CNTN6Q9UQ52 1028 aa28.43■■■□□ 2.14
COL13A1-210ENST00000517713 ZSWIM8A7E2V4 1837 aa28.43■■■□□ 2.14
COL13A1-210ENST00000517713 A0A087WZ62 844 aa28.43■■■□□ 2.14
COL13A1-210ENST00000517713 ASS1P00966 412 aaKnown RBP28.43■■■□□ 2.14
COL13A1-210ENST00000517713 TMEM270Q6UE05 265 aa28.43■■■□□ 2.14
COL13A1-210ENST00000517713 IFNLR1Q8IU57 520 aaPredicted RBP28.43■■■□□ 2.14
COL13A1-210ENST00000517713 GSPT2Q8IYD1 628 aaKnown RBP28.43■■■□□ 2.14
COL13A1-210ENST00000517713 FDXACB1Q9BRP7 624 aaPredicted RBP28.43■■■□□ 2.14
COL13A1-210ENST00000517713 CDT1Q9H211 546 aa28.43■■■□□ 2.14
COL13A1-210ENST00000517713 UVRAGQ9P2Y5 699 aa28.43■■■□□ 2.14
COL13A1-210ENST00000517713 HOXC6P09630 235 aa28.42■■■□□ 2.14
COL13A1-210ENST00000517713 HOXD8P13378 290 aaPredicted RBP28.42■■■□□ 2.14
COL13A1-210ENST00000517713 OSTNP61366 133 aa28.42■■■□□ 2.14
COL13A1-210ENST00000517713 SMC1AQ14683 1233 aaKnown RBP28.42■■■□□ 2.14
COL13A1-210ENST00000517713 ZNF564Q8TBZ8 553 aaPredicted RBP28.42■■■□□ 2.14
COL13A1-210ENST00000517713 PPP1R16BQ96T49 567 aa28.42■■■□□ 2.14
COL13A1-210ENST00000517713 TTC7AQ9ULT0 858 aaPredicted RBP28.42■■■□□ 2.14
COL13A1-210ENST00000517713 ZNF236Q9UL36 1845 aa28.42■■■□□ 2.14
COL13A1-210ENST00000517713 TMEM110-MUSTN1A8MSY1 372 aa28.42■■■□□ 2.14
COL13A1-210ENST00000517713 MESDQ14696 234 aa28.42■■■□□ 2.14
COL13A1-210ENST00000517713 DGKDQ16760 1214 aa28.42■■■□□ 2.14
COL13A1-210ENST00000517713 RPS6KC1Q96S38 1066 aa28.42■■■□□ 2.14
COL13A1-210ENST00000517713 VTNP04004 478 aa28.41■■■□□ 2.14
COL13A1-210ENST00000517713 TNNT3P45378 269 aaPredicted RBP28.41■■■□□ 2.14
COL13A1-210ENST00000517713 MYL6P60660 151 aa28.41■■■□□ 2.14
COL13A1-210ENST00000517713 TFAMQ00059 246 aaKnown RBP28.41■■■□□ 2.14
COL13A1-210ENST00000517713 DCAF12L1Q5VU92 463 aa28.41■■■□□ 2.14
COL13A1-210ENST00000517713 KLHL7Q8IXQ5 586 aa28.41■■■□□ 2.14
COL13A1-210ENST00000517713 CEP120Q8N960 986 aa28.41■■■□□ 2.14
COL13A1-210ENST00000517713 RBBP8NLQ8NC74 664 aaPredicted RBP28.41■■■□□ 2.14
COL13A1-210ENST00000517713 CARD9Q9H257 536 aa28.41■■■□□ 2.14
COL13A1-210ENST00000517713 CNOT8Q9UFF9 292 aaKnown RBP28.41■■■□□ 2.14
COL13A1-210ENST00000517713 MIF4GDA9UHW6 222 aaKnown RBP28.4■■■□□ 2.14
COL13A1-210ENST00000517713 B4GALT4O60513 344 aa28.4■■■□□ 2.14
COL13A1-210ENST00000517713 TMEM191BP0C7N4 346 aa28.4■■■□□ 2.14
COL13A1-210ENST00000517713 TNFRSF8P28908 595 aa28.4■■■□□ 2.14
COL13A1-210ENST00000517713 PPFIA1Q13136 1202 aa28.4■■■□□ 2.14
COL13A1-210ENST00000517713 TRPC3Q13507 836 aa28.4■■■□□ 2.14
COL13A1-210ENST00000517713 SGSM1Q2NKQ1 1148 aa28.4■■■□□ 2.14
COL13A1-210ENST00000517713 AP1M1Q9BXS5 423 aa28.4■■■□□ 2.14
COL13A1-210ENST00000517713 RPF1Q9H9Y2 349 aaKnown RBP28.4■■■□□ 2.14
COL13A1-210ENST00000517713 KRIT1O00522 736 aa28.4■■■□□ 2.14
COL13A1-210ENST00000517713 CSDE1O75534 798 aaKnown RBP28.4■■■□□ 2.14
COL13A1-210ENST00000517713 GNA15P30679 374 aa28.4■■■□□ 2.14
COL13A1-210ENST00000517713 GRIK4Q16099 956 aa28.4■■■□□ 2.14
COL13A1-210ENST00000517713 AMHR2Q16671 573 aa28.4■■■□□ 2.14
COL13A1-210ENST00000517713 MORN1Q5T089 497 aa28.4■■■□□ 2.14
COL13A1-210ENST00000517713 IFT20Q8IY31 132 aa28.4■■■□□ 2.14
COL13A1-210ENST00000517713 AENQ8WTP8 325 aaKnown RBP28.4■■■□□ 2.14
COL13A1-210ENST00000517713 UBE2Q2Q8WVN8 375 aa28.4■■■□□ 2.14
COL13A1-210ENST00000517713 CPA5Q8WXQ8 436 aa28.4■■■□□ 2.14
COL13A1-210ENST00000517713 ST7Q9NRC1 585 aa28.4■■■□□ 2.14
COL13A1-210ENST00000517713 CCDC188H7C350 402 aa28.39■■■□□ 2.14
COL13A1-210ENST00000517713 GPR25O00155 361 aa28.39■■■□□ 2.14
COL13A1-210ENST00000517713 ADCY6O43306 1168 aa28.39■■■□□ 2.14
COL13A1-210ENST00000517713 ZEB2O60315 1214 aa28.39■■■□□ 2.14
COL13A1-210ENST00000517713 HEXIM1O94992 359 aaKnown RBP28.39■■■□□ 2.14
COL13A1-210ENST00000517713 IL18RAPO95256 599 aa28.39■■■□□ 2.14
COL13A1-210ENST00000517713 TNNC2P02585 160 aa28.39■■■□□ 2.14
COL13A1-210ENST00000517713 CYP1A1P04798 512 aaPredicted RBP28.39■■■□□ 2.14
COL13A1-210ENST00000517713 GLI1P08151 1106 aa28.39■■■□□ 2.14
COL13A1-210ENST00000517713 COMTP21964 271 aa28.39■■■□□ 2.14
COL13A1-210ENST00000517713 TNFAIP2Q03169 654 aa28.39■■■□□ 2.14
COL13A1-210ENST00000517713 EFCAB13Q8IY85 973 aa28.39■■■□□ 2.14
COL13A1-210ENST00000517713 MCOLN2Q8IZK6 566 aa28.39■■■□□ 2.14
COL13A1-210ENST00000517713 UBL4BQ8N7F7 174 aa28.39■■■□□ 2.14
COL13A1-210ENST00000517713 UBR7Q8N806 425 aa28.39■■■□□ 2.14
COL13A1-210ENST00000517713 ANKRD36BP1Q96IX9 119 aa28.39■■■□□ 2.14
COL13A1-210ENST00000517713 A0A0U1RQG5 324 aaPredicted RBP28.38■■■□□ 2.13
COL13A1-210ENST00000517713 ECM2O94769 699 aaPredicted RBP28.38■■■□□ 2.13
COL13A1-210ENST00000517713 ITGBL1O95965 494 aaPredicted RBP28.38■■■□□ 2.13
COL13A1-210ENST00000517713 MARCH8Q5T0T0 291 aa28.38■■■□□ 2.13
COL13A1-210ENST00000517713 TRIM72Q6ZMU5 477 aa28.38■■■□□ 2.13
COL13A1-210ENST00000517713 RASAL3Q86YV0 1011 aa28.38■■■□□ 2.13
COL13A1-210ENST00000517713 GDF3Q9NR23 364 aa28.38■■■□□ 2.13
COL13A1-210ENST00000517713 IGF2BP3O00425 579 aaKnown RBP eCLIP28.38■■■□□ 2.13
COL13A1-210ENST00000517713 CXCL8P10145 99 aa28.38■■■□□ 2.13
COL13A1-210ENST00000517713 MCF2P10911 925 aa28.38■■■□□ 2.13
COL13A1-210ENST00000517713 ZNF157P51786 506 aaPredicted RBP28.38■■■□□ 2.13
COL13A1-210ENST00000517713 NAA35Q5VZE5 725 aa28.38■■■□□ 2.13
COL13A1-210ENST00000517713 TMEM192Q8IY95 271 aa28.38■■■□□ 2.13
COL13A1-210ENST00000517713 ALG3Q92685 438 aa28.38■■■□□ 2.13
COL13A1-210ENST00000517713 CYFIP2Q96F07 1278 aa28.38■■■□□ 2.13
COL13A1-210ENST00000517713 TRIM11Q96F44 468 aa28.38■■■□□ 2.13
COL13A1-210ENST00000517713 RNPC3Q96LT9 517 aaKnown RBP28.38■■■□□ 2.13
COL13A1-210ENST00000517713 NMRK2Q9NPI5 230 aa28.38■■■□□ 2.13
COL13A1-210ENST00000517713 RAD51CO43502 376 aa28.37■■■□□ 2.13
COL13A1-210ENST00000517713 FGGP02679 453 aa28.37■■■□□ 2.13
COL13A1-210ENST00000517713 MYBL1P10243 752 aa28.37■■■□□ 2.13
COL13A1-210ENST00000517713 NSFP46459 744 aaKnown RBP28.37■■■□□ 2.13
COL13A1-210ENST00000517713 GUCY2DQ02846 1103 aa28.37■■■□□ 2.13
COL13A1-210ENST00000517713 CENPCQ03188 943 aa28.37■■■□□ 2.13
COL13A1-210ENST00000517713 MAP2K5Q13163 448 aa28.37■■■□□ 2.13
COL13A1-210ENST00000517713 GPS2Q13227 327 aa28.37■■■□□ 2.13
COL13A1-210ENST00000517713 NLRP7Q8WX94 980 aa28.37■■■□□ 2.13
COL13A1-210ENST00000517713 BTBD6Q96KE9 485 aa28.37■■■□□ 2.13
COL13A1-210ENST00000517713 NIF3L1Q9GZT8 377 aa28.37■■■□□ 2.13
COL13A1-210ENST00000517713 WNT8AQ9H1J5 351 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms