RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 ROR1Q01973 937 aa12.63□□□□□ -0.39
TRAPPC9-203ENST00000517667 TOB2Q14106 344 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC9-203ENST00000517667 LRRC32Q14392 662 aa12.63□□□□□ -0.39
TRAPPC9-203ENST00000517667 UPP1Q16831 310 aa12.63□□□□□ -0.39
TRAPPC9-203ENST00000517667 DCAF4L1Q3SXM0 396 aa12.63□□□□□ -0.39
TRAPPC9-203ENST00000517667 CYP4A22Q5TCH4 519 aa12.63□□□□□ -0.39
TRAPPC9-203ENST00000517667 RUFY3Q7L099 469 aa12.63□□□□□ -0.39
TRAPPC9-203ENST00000517667 APBB1IPQ7Z5R6 666 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC9-203ENST00000517667 LONP2Q86WA8 852 aa12.63□□□□□ -0.39
TRAPPC9-203ENST00000517667 TCEAL8Q8IYN2 117 aa12.63□□□□□ -0.39
TRAPPC9-203ENST00000517667 LEMD2Q8NC56 503 aa12.63□□□□□ -0.39
TRAPPC9-203ENST00000517667 E2F7Q96AV8 911 aa12.63□□□□□ -0.39
TRAPPC9-203ENST00000517667 DDX27Q96GQ7 796 aaKnown RBP12.63□□□□□ -0.39
TRAPPC9-203ENST00000517667 FAM208BQ5VWN6 2430 aa12.63□□□□□ -0.39
TRAPPC9-203ENST00000517667 TRIP11Q15643 1979 aa12.63□□□□□ -0.39
TRAPPC9-203ENST00000517667 CACNA1GO43497 2377 aa12.62□□□□□ -0.39
TRAPPC9-203ENST00000517667 WDR27A2RRH5 827 aa12.62□□□□□ -0.39
TRAPPC9-203ENST00000517667 CHRNB1P11230 501 aa12.62□□□□□ -0.39
TRAPPC9-203ENST00000517667 ATF2P15336 505 aa12.62□□□□□ -0.39
TRAPPC9-203ENST00000517667 SHC2P98077 582 aa12.62□□□□□ -0.39
TRAPPC9-203ENST00000517667 SATB1Q01826 763 aa12.62□□□□□ -0.39
TRAPPC9-203ENST00000517667 IQCEQ6IPM2 695 aa12.62□□□□□ -0.39
TRAPPC9-203ENST00000517667 VITQ6UXI7 678 aa12.62□□□□□ -0.39
TRAPPC9-203ENST00000517667 NOSTRINQ8IVI9 506 aa12.62□□□□□ -0.39
TRAPPC9-203ENST00000517667 PIGOQ8TEQ8 1089 aa12.62□□□□□ -0.39
TRAPPC9-203ENST00000517667 PPP1R10Q96QC0 940 aaKnown RBP12.62□□□□□ -0.39
TRAPPC9-203ENST00000517667 TRPV4Q9HBA0 871 aa12.62□□□□□ -0.39
TRAPPC9-203ENST00000517667 CYP4F11Q9HBI6 524 aa12.62□□□□□ -0.39
TRAPPC9-203ENST00000517667 GDAQ9Y2T3 454 aa12.62□□□□□ -0.39
TRAPPC9-203ENST00000517667 BAHCC1Q9P281 2608 aa12.62□□□□□ -0.39
TRAPPC9-203ENST00000517667 STK36Q9NRP7 1315 aa12.62□□□□□ -0.39
TRAPPC9-203ENST00000517667 CNOT1A5YKK6 2376 aaKnown RBP12.61□□□□□ -0.39
TRAPPC9-203ENST00000517667 CHURC1-FNTBB4DL54 471 aa12.61□□□□□ -0.39
TRAPPC9-203ENST00000517667 H7C4K7 107 aa12.61□□□□□ -0.39
TRAPPC9-203ENST00000517667 ACKR2O00590 384 aa12.61□□□□□ -0.39
TRAPPC9-203ENST00000517667 ZNF263O14978 683 aa12.61□□□□□ -0.39
TRAPPC9-203ENST00000517667 HRO43593 1189 aa12.61□□□□□ -0.39
TRAPPC9-203ENST00000517667 GDF9O60383 454 aa12.61□□□□□ -0.39
TRAPPC9-203ENST00000517667 PRKCBP05771 671 aa12.61□□□□□ -0.39
TRAPPC9-203ENST00000517667 ATP2B1P20020 1258 aa12.61□□□□□ -0.39
TRAPPC9-203ENST00000517667 KCNA4P22459 653 aa12.61□□□□□ -0.39
TRAPPC9-203ENST00000517667 PMLP29590 882 aa12.61□□□□□ -0.39
TRAPPC9-203ENST00000517667 FNTBP49356 437 aa12.61□□□□□ -0.39
TRAPPC9-203ENST00000517667 PTGDRQ13258 359 aa12.61□□□□□ -0.39
TRAPPC9-203ENST00000517667 CALCRLQ16602 461 aa12.61□□□□□ -0.39
TRAPPC9-203ENST00000517667 AASDHQ4L235 1098 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC9-203ENST00000517667 TPGS2Q68CL5 300 aa12.61□□□□□ -0.39
TRAPPC9-203ENST00000517667 POTEHQ6S545 545 aa12.61□□□□□ -0.39
TRAPPC9-203ENST00000517667 MFSD6LQ8IWD5 586 aa12.61□□□□□ -0.39
TRAPPC9-203ENST00000517667 CSGALNACT1Q8TDX6 532 aa12.61□□□□□ -0.39
TRAPPC9-203ENST00000517667 TCEAL4Q96EI5 215 aa12.61□□□□□ -0.39
TRAPPC9-203ENST00000517667 GPR88Q9GZN0 384 aa12.61□□□□□ -0.39
TRAPPC9-203ENST00000517667 TTC12Q9H892 705 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC9-203ENST00000517667 GPRC5CQ9NQ84 441 aa12.61□□□□□ -0.39
TRAPPC9-203ENST00000517667 MAFFQ9ULX9 164 aa12.61□□□□□ -0.39
TRAPPC9-203ENST00000517667 INSL5Q9Y5Q6 135 aa12.61□□□□□ -0.39
TRAPPC9-203ENST00000517667 CYP46A1Q9Y6A2 500 aa12.61□□□□□ -0.39
TRAPPC9-203ENST00000517667 TTLL13PA6NNM8 815 aa12.6□□□□□ -0.39
TRAPPC9-203ENST00000517667 SYN3O14994 580 aa12.6□□□□□ -0.39
TRAPPC9-203ENST00000517667 REC8O95072 547 aa12.6□□□□□ -0.39
TRAPPC9-203ENST00000517667 CCNE1P24864 410 aa12.6□□□□□ -0.39
TRAPPC9-203ENST00000517667 NAMPTP43490 491 aa12.6□□□□□ -0.39
TRAPPC9-203ENST00000517667 IRX6P78412 446 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-203ENST00000517667 STK3Q13188 491 aa12.6□□□□□ -0.39
TRAPPC9-203ENST00000517667 PPP2R5AQ15172 486 aa12.6□□□□□ -0.39
TRAPPC9-203ENST00000517667 GLRA4Q5JXX5 417 aa12.6□□□□□ -0.39
TRAPPC9-203ENST00000517667 DGKKQ5KSL6 1271 aa12.6□□□□□ -0.39
TRAPPC9-203ENST00000517667 CEP68Q76N32 757 aa12.6□□□□□ -0.39
TRAPPC9-203ENST00000517667 MAEAQ7L5Y9 396 aa12.6□□□□□ -0.39
TRAPPC9-203ENST00000517667 YAF2Q8IY57 180 aa12.6□□□□□ -0.39
TRAPPC9-203ENST00000517667 FAM160A2Q8N612 972 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-203ENST00000517667 C12orf50Q8NA57 414 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-203ENST00000517667 C3orf58Q8NDZ4 430 aa12.6□□□□□ -0.39
TRAPPC9-203ENST00000517667 ZSCAN18Q8TBC5 510 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-203ENST00000517667 OXER1Q8TDS5 423 aa12.6□□□□□ -0.39
TRAPPC9-203ENST00000517667 ZNF512Q96ME7 567 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-203ENST00000517667 CCDC113Q9H0I3 377 aa12.6□□□□□ -0.39
TRAPPC9-203ENST00000517667 CXCL16Q9H2A7 254 aa12.6□□□□□ -0.39
TRAPPC9-203ENST00000517667 C8orf33Q9H7E9 229 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-203ENST00000517667 ZSWIM6Q9HCJ5 1215 aa12.6□□□□□ -0.39
TRAPPC9-203ENST00000517667 BRMS1Q9HCU9 246 aa12.6□□□□□ -0.39
TRAPPC9-203ENST00000517667 ASAH2Q9NR71 780 aa12.6□□□□□ -0.39
TRAPPC9-203ENST00000517667 TOPORSQ9NS56 1045 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-203ENST00000517667 SLC38A7Q9NVC3 462 aa12.6□□□□□ -0.39
TRAPPC9-203ENST00000517667 NUP210Q8TEM1 1887 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC9-203ENST00000517667 ATRXP46100 2492 aa12.59□□□□□ -0.39
TRAPPC9-203ENST00000517667 I3L4J1 428 aa12.59□□□□□ -0.39
TRAPPC9-203ENST00000517667 K7ESF4 209 aa12.59□□□□□ -0.39
TRAPPC9-203ENST00000517667 ARNTLO00327 626 aa12.59□□□□□ -0.39
TRAPPC9-203ENST00000517667 HOXA6P31267 233 aa12.59□□□□□ -0.39
TRAPPC9-203ENST00000517667 CCR2P41597 374 aa12.59□□□□□ -0.39
TRAPPC9-203ENST00000517667 BRCC3P46736 316 aa12.59□□□□□ -0.39
TRAPPC9-203ENST00000517667 EFNA5P52803 228 aa12.59□□□□□ -0.39
TRAPPC9-203ENST00000517667 YARSP54577 528 aaKnown RBP12.59□□□□□ -0.39
TRAPPC9-203ENST00000517667 EPHA5P54756 1037 aa12.59□□□□□ -0.39
TRAPPC9-203ENST00000517667 GAS6Q14393 721 aa12.59□□□□□ -0.39
TRAPPC9-203ENST00000517667 CD300LGQ6UXG3 332 aa12.59□□□□□ -0.39
TRAPPC9-203ENST00000517667 DEPTORQ8TB45 409 aa12.59□□□□□ -0.39
TRAPPC9-203ENST00000517667 FAM200AQ8TCP9 573 aa12.59□□□□□ -0.39
TRAPPC9-203ENST00000517667 WASF1Q92558 559 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms