RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 GALTP07902 379 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 DLATP10515 647 aaKnown RBP10.7□□□□□ -0.7
CLN8-202ENST00000517514 LRPAP1P30533 357 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 CLCNKBP51801 687 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 TAP1Q03518 808 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 TUSC3Q13454 348 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 BTG3Q14201 252 aaPredicted RBP10.7□□□□□ -0.7
CLN8-202ENST00000517514 KCNJ12Q14500 433 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 KRT31Q15323 416 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 ZACNQ401N2 412 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 CCDC40Q4G0X9 1142 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 CBWD6Q4V339 395 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 TCP11X2Q5H9J9 407 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 CBWD3Q5JTY5 395 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 CBWD5Q5RIA9 395 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 TDRD10Q5VZ19 366 aaKnown RBP10.7□□□□□ -0.7
CLN8-202ENST00000517514 DPY19L2P1Q6NXN4 242 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 SV2AQ7L0J3 742 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 TRAPPC11Q7Z392 1133 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 WDR49Q8IV35 697 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 LRRC43Q8N309 656 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 URGCPQ8TCY9 931 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 SEMA4DQ92854 862 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 ELMO3Q96BJ8 720 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 RPS6KC1Q96S38 1066 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 TSPAN18Q96SJ8 248 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 YME1L1Q96TA2 773 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 VN1R3Q9BXE9 311 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 NAT10Q9H0A0 1025 aaKnown RBP10.7□□□□□ -0.7
CLN8-202ENST00000517514 RNF216Q9NWF9 866 aaPredicted RBP10.7□□□□□ -0.7
CLN8-202ENST00000517514 MARCH5Q9NX47 278 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 LIMA1Q9UHB6 759 aaKnown RBP10.7□□□□□ -0.7
CLN8-202ENST00000517514 UBQLN1Q9UMX0 589 aaKnown RBP10.7□□□□□ -0.7
CLN8-202ENST00000517514 PCDHA11Q9Y5I1 949 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 CDH23Q9H251 3354 aa10.7□□□□□ -0.7
CLN8-202ENST00000517514 NT5C1B-RDH14C9J2C7 533 aa10.69□□□□□ -0.7
CLN8-202ENST00000517514 SOX1O00570 391 aaPredicted RBP10.69□□□□□ -0.7
CLN8-202ENST00000517514 PIRO00625 290 aa10.69□□□□□ -0.7
CLN8-202ENST00000517514 NRP1O14786 923 aa10.69□□□□□ -0.7
CLN8-202ENST00000517514 SPTLC1O15269 473 aa10.69□□□□□ -0.7
CLN8-202ENST00000517514 CAVIN2O95810 425 aa10.69□□□□□ -0.7
CLN8-202ENST00000517514 GNA14O95837 355 aa10.69□□□□□ -0.7
CLN8-202ENST00000517514 CA3P07451 260 aa10.69□□□□□ -0.7
CLN8-202ENST00000517514 CYP3A5P20815 502 aa10.69□□□□□ -0.7
CLN8-202ENST00000517514 GCLMP48507 274 aa10.69□□□□□ -0.7
CLN8-202ENST00000517514 BCAR1P56945 870 aa10.69□□□□□ -0.7
CLN8-202ENST00000517514 TFAMQ00059 246 aaKnown RBP10.69□□□□□ -0.7
CLN8-202ENST00000517514 SURF1Q15526 300 aa10.69□□□□□ -0.7
CLN8-202ENST00000517514 UPP1Q16831 310 aa10.69□□□□□ -0.7
CLN8-202ENST00000517514 LRIT3Q3SXY7 679 aa10.69□□□□□ -0.7
CLN8-202ENST00000517514 C9orf57Q5W0N0 161 aa10.69□□□□□ -0.7
CLN8-202ENST00000517514 NT5DC4Q86YG4 428 aa10.69□□□□□ -0.7
CLN8-202ENST00000517514 ABI1Q8IZP0 508 aa10.69□□□□□ -0.7
CLN8-202ENST00000517514 COLGALT1Q8NBJ5 622 aa10.69□□□□□ -0.7
CLN8-202ENST00000517514 RNF214Q8ND24 703 aa10.69□□□□□ -0.7
CLN8-202ENST00000517514 LMO3Q8TAP4 145 aa10.69□□□□□ -0.7
CLN8-202ENST00000517514 ZBED2Q9BTP6 218 aa10.69□□□□□ -0.7
CLN8-202ENST00000517514 MRPL9Q9BYD2 267 aaKnown RBP10.69□□□□□ -0.7
CLN8-202ENST00000517514 XYLT2Q9H1B5 865 aa10.69□□□□□ -0.7
CLN8-202ENST00000517514 NKX2-4Q9H2Z4 354 aa10.69□□□□□ -0.7
CLN8-202ENST00000517514 METTL14Q9HCE5 456 aaKnown RBP10.69□□□□□ -0.7
CLN8-202ENST00000517514 DPP3Q9NY33 737 aa10.69□□□□□ -0.7
CLN8-202ENST00000517514 TAB2Q9NYJ8 693 aa10.69□□□□□ -0.7
CLN8-202ENST00000517514 KANSL3Q9P2N6 904 aa10.69□□□□□ -0.7
CLN8-202ENST00000517514 SZT2Q5T011 3432 aa10.68□□□□□ -0.7
CLN8-202ENST00000517514 A0A1W2PPC1 479 aa10.68□□□□□ -0.7
CLN8-202ENST00000517514 LRRC10BA6NIK2 292 aa10.68□□□□□ -0.7
CLN8-202ENST00000517514 SMTNL1A8MU46 457 aa10.68□□□□□ -0.7
CLN8-202ENST00000517514 ZC3H11AO75152 810 aaKnown RBP eCLIP10.68□□□□□ -0.7
CLN8-202ENST00000517514 KIF4AO95239 1232 aa10.68□□□□□ -0.7
CLN8-202ENST00000517514 FGFR1OPO95684 399 aaKnown RBP10.68□□□□□ -0.7
CLN8-202ENST00000517514 ITGB3P05106 788 aa10.68□□□□□ -0.7
CLN8-202ENST00000517514 KRT13P13646 458 aa10.68□□□□□ -0.7
CLN8-202ENST00000517514 TNNI1P19237 187 aa10.68□□□□□ -0.7
CLN8-202ENST00000517514 EEF1GP26641 437 aaKnown RBP10.68□□□□□ -0.7
CLN8-202ENST00000517514 FMO5P49326 533 aa10.68□□□□□ -0.7
CLN8-202ENST00000517514 AARSP49588 968 aaKnown RBP eCLIP10.68□□□□□ -0.7
CLN8-202ENST00000517514 SMAD3P84022 425 aaKnown RBP10.68□□□□□ -0.7
CLN8-202ENST00000517514 KCNH2Q12809 1159 aa10.68□□□□□ -0.7
CLN8-202ENST00000517514 TPD52L1Q16890 204 aaPredicted RBP10.68□□□□□ -0.7
CLN8-202ENST00000517514 DUOXA2Q1HG44 320 aa10.68□□□□□ -0.7
CLN8-202ENST00000517514 DCAF17Q5H9S7 520 aaPredicted RBP10.68□□□□□ -0.7
CLN8-202ENST00000517514 KCNT2Q6UVM3 1135 aa10.68□□□□□ -0.7
CLN8-202ENST00000517514 SLC39A11Q8N1S5 342 aa10.68□□□□□ -0.7
CLN8-202ENST00000517514 FIBCD1Q8N539 461 aa10.68□□□□□ -0.7
CLN8-202ENST00000517514 BEST2Q8NFU1 509 aa10.68□□□□□ -0.7
CLN8-202ENST00000517514 TAS1R2Q8TE23 839 aa10.68□□□□□ -0.7
CLN8-202ENST00000517514 RSPH1Q8WYR4 309 aa10.68□□□□□ -0.7
CLN8-202ENST00000517514 NAP1L5Q96NT1 182 aaPredicted RBP10.68□□□□□ -0.7
CLN8-202ENST00000517514 FNBP1Q96RU3 617 aa10.68□□□□□ -0.7
CLN8-202ENST00000517514 TMEM175Q9BSA9 504 aa10.68□□□□□ -0.7
CLN8-202ENST00000517514 TUBGCP2Q9BSJ2 902 aa10.68□□□□□ -0.7
CLN8-202ENST00000517514 C17orf80Q9BSJ5 609 aa10.68□□□□□ -0.7
CLN8-202ENST00000517514 TMEM8AQ9HCN3 771 aa10.68□□□□□ -0.7
CLN8-202ENST00000517514 COQ4Q9Y3A0 265 aa10.68□□□□□ -0.7
CLN8-202ENST00000517514 EPOPA6NHQ4 379 aa10.67□□□□□ -0.7
CLN8-202ENST00000517514 TMEM189-UBE2V1I3L0A0 370 aa10.67□□□□□ -0.7
CLN8-202ENST00000517514 PODXLO00592 558 aa10.67□□□□□ -0.7
CLN8-202ENST00000517514 PMM2O15305 246 aa10.67□□□□□ -0.7
CLN8-202ENST00000517514 HLA-DRAP01903 254 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms