RNA–Protein interactions for RNA: ENST00000516146.1

RNU6-27P-201, Transcript of RNA, U6 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU6-27P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-27P-201ENST00000516146 ARFIP2P53365 341 aa4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 ARL4CP56559 192 aa4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 GEMIN4P57678 1058 aaKnown RBP4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 SRSF3P84103 164 aaKnown RBP4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 MXRA7P84157 204 aa4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 EXOSC9Q06265 439 aaKnown RBP4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 SLC13A2Q13183 592 aa4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 DDX10Q13206 875 aaKnown RBP4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 TOP3AQ13472 1001 aaPredicted RBP4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 CNGB1Q14028 1251 aaPredicted RBP4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 TAF12Q16514 161 aa4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 PFKFB4Q16877 469 aa4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 PABPC1LQ4VXU2 614 aaKnown RBP4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 LVRNQ6Q4G3 990 aa4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 STK32CQ86UX6 486 aa4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 NME8Q8N427 588 aa4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 AOPEPQ8N6M6 819 aa4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 CELF5Q8N6W0 485 aaKnown RBP4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 NAXEQ8NCW5 288 aa4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 GIMAP8Q8ND71 665 aaPredicted RBP4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 IL17REQ8NFR9 667 aa4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 SKA1Q96BD8 255 aa4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 TRIM43Q96BQ3 446 aaPredicted RBP4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 SLC7A6OSQ96CW6 309 aaPredicted RBP4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 SNX22Q96L94 193 aa4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 ZSCAN31Q96LW9 406 aaPredicted RBP4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 GORASP1Q9BQQ3 440 aa4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 C11orf84Q9BUA3 381 aaPredicted RBP4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 C1orf43Q9BWL3 253 aa4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 DPH1Q9BZG8 443 aa4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 ZNF518BQ9C0D4 1074 aa4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 C11orf54Q9H0W9 315 aaPredicted RBP4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 ZNF552Q9H707 407 aaPredicted RBP4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 SLAMF7Q9NQ25 335 aa4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 CFAP97Q9P2B7 532 aa4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 SCINQ9Y6U3 715 aa4.45□□□□□ -1.7
RNU6-27P-201ENST00000516146 CLCA1A8K7I4 914 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 SYT5O00445 386 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 BTN3A1O00481 513 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 NCAM2O15394 837 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 CNOT4O95628 575 aaKnown RBP4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 MT-ND5P03915 603 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 GNAI2P04899 355 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 SRGNP10124 158 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 IDEP14735 1019 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 KLRC1P26715 233 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 PCSK1P29120 753 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 KIR2DL3P43628 341 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 FLT3LGP49771 235 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 HTRA4P83105 476 aaPredicted RBP4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 PTH1RQ03431 593 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 FOXO1Q12778 655 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 FYB2Q5VWT5 728 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 LMBRD2Q68DH5 695 aaPredicted RBP4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 KRT40Q6A162 431 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 MZT2AQ6P582 158 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 CYP26C1Q6V0L0 522 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 CATSPERGQ6ZRH7 1159 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 RNF44Q7L0R7 432 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 ZNF572Q7Z3I7 529 aaPredicted RBP4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 ZNF605Q86T29 641 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 LDHDQ86WU2 507 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 PLXDC1Q8IUK5 500 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 ATG16L2Q8NAA4 619 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 CCDC150Q8NCX0 1101 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 PPM1MQ96MI6 270 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 PACSIN1Q9BY11 444 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 MAGEH1Q9H213 219 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 ADAM7Q9H2U9 754 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 PCMTD2Q9NV79 361 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 RLIMQ9NVW2 624 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 GRHPRQ9UBQ7 328 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 FAM184BQ9ULE4 1060 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 RUVBL1Q9Y265 456 aaKnown RBP4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 MAN2B2Q9Y2E5 1009 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 ACTL7AQ9Y615 435 aa4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.44□□□□□ -1.7
RNU6-27P-201ENST00000516146 MBD3L4A6NDZ8 208 aaPredicted RBP4.43□□□□□ -1.7
RNU6-27P-201ENST00000516146 MBD3L3A6NE82 208 aaPredicted RBP4.43□□□□□ -1.7
RNU6-27P-201ENST00000516146 MYO1CO00159 1063 aa4.43□□□□□ -1.7
RNU6-27P-201ENST00000516146 BIN1O00499 593 aa4.43□□□□□ -1.7
RNU6-27P-201ENST00000516146 PODXLO00592 558 aa4.43□□□□□ -1.7
RNU6-27P-201ENST00000516146 AREL1O15033 823 aa4.43□□□□□ -1.7
RNU6-27P-201ENST00000516146 GRM6O15303 877 aa4.43□□□□□ -1.7
RNU6-27P-201ENST00000516146 MATN4O95460 622 aa4.43□□□□□ -1.7
RNU6-27P-201ENST00000516146 ABHD16AO95870 558 aa4.43□□□□□ -1.7
RNU6-27P-201ENST00000516146 IGHA1P01876 353 aa4.43□□□□□ -1.7
RNU6-27P-201ENST00000516146 JUNP05412 331 aaKnown RBP4.43□□□□□ -1.7
RNU6-27P-201ENST00000516146 RAP2AP10114 183 aa4.43□□□□□ -1.7
RNU6-27P-201ENST00000516146 ATF2P15336 505 aa4.43□□□□□ -1.7
RNU6-27P-201ENST00000516146 HDCP19113 662 aa4.43□□□□□ -1.7
RNU6-27P-201ENST00000516146 FPR1P21462 350 aa4.43□□□□□ -1.7
RNU6-27P-201ENST00000516146 CARSP49589 748 aaKnown RBP4.43□□□□□ -1.7
RNU6-27P-201ENST00000516146 NOMO3P69849 1222 aa4.43□□□□□ -1.7
RNU6-27P-201ENST00000516146 POU6F2P78424 691 aaPredicted RBP4.43□□□□□ -1.7
RNU6-27P-201ENST00000516146 FOXD4Q12950 439 aaPredicted RBP4.43□□□□□ -1.7
RNU6-27P-201ENST00000516146 ADAM15Q13444 863 aa4.43□□□□□ -1.7
RNU6-27P-201ENST00000516146 SMAD4Q13485 552 aaKnown RBP4.43□□□□□ -1.7
RNU6-27P-201ENST00000516146 RTP5Q14D33 572 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms