RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 FOXD4L1Q9NU39 408 aa19.3■□□□□ 0.68
SFXN1-212ENST00000515791 TUBGCP4Q9UGJ1 667 aa19.3■□□□□ 0.68
SFXN1-212ENST00000515791 CDY1Q9Y6F8 540 aa19.3■□□□□ 0.68
SFXN1-212ENST00000515791 A0A0B4J269 797 aa19.29■□□□□ 0.68
SFXN1-212ENST00000515791 TRAPPC3O43617 180 aa19.29■□□□□ 0.68
SFXN1-212ENST00000515791 STX6O43752 255 aa19.29■□□□□ 0.68
SFXN1-212ENST00000515791 FAM13AO94988 1023 aa19.29■□□□□ 0.68
SFXN1-212ENST00000515791 C8AP07357 584 aa19.29■□□□□ 0.68
SFXN1-212ENST00000515791 POU2F2P09086 479 aa19.29■□□□□ 0.68
SFXN1-212ENST00000515791 CLTAP09496 248 aa19.29■□□□□ 0.68
SFXN1-212ENST00000515791 HNRNPA1P09651 372 aaKnown RBP eCLIP19.29■□□□□ 0.68
SFXN1-212ENST00000515791 SLC39A14Q15043 492 aa19.29■□□□□ 0.68
SFXN1-212ENST00000515791 SLC8B1Q6J4K2 584 aa19.29■□□□□ 0.68
SFXN1-212ENST00000515791 ANKS3Q6ZW76 656 aa19.29■□□□□ 0.68
SFXN1-212ENST00000515791 MAP4K3Q8IVH8 894 aa19.29■□□□□ 0.68
SFXN1-212ENST00000515791 RSAD2Q8WXG1 361 aa19.29■□□□□ 0.68
SFXN1-212ENST00000515791 DNAJC19Q96DA6 116 aa19.29■□□□□ 0.68
SFXN1-212ENST00000515791 STRA6Q9BX79 667 aa19.29■□□□□ 0.68
SFXN1-212ENST00000515791 ZDBF2Q9HCK1 2354 aa19.29■□□□□ 0.68
SFXN1-212ENST00000515791 DMDP11532 3685 aa19.28■□□□□ 0.68
SFXN1-212ENST00000515791 MYH15Q9Y2K3 1946 aa19.28■□□□□ 0.68
SFXN1-212ENST00000515791 A0A087X0B3 334 aa19.28■□□□□ 0.68
SFXN1-212ENST00000515791 ANKRD63C9JTQ0 380 aa19.28■□□□□ 0.68
SFXN1-212ENST00000515791 K7ENM7 598 aa19.28■□□□□ 0.68
SFXN1-212ENST00000515791 SYN3O14994 580 aa19.28■□□□□ 0.68
SFXN1-212ENST00000515791 ABLIM3O94929 683 aa19.28■□□□□ 0.68
SFXN1-212ENST00000515791 AVPR2P30518 371 aa19.28■□□□□ 0.68
SFXN1-212ENST00000515791 LRPAP1P30533 357 aa19.28■□□□□ 0.68
SFXN1-212ENST00000515791 NASPP49321 788 aaPredicted RBP19.28■□□□□ 0.68
SFXN1-212ENST00000515791 NHLH1Q02575 133 aa19.28■□□□□ 0.68
SFXN1-212ENST00000515791 CEBPZQ03701 1054 aaKnown RBP19.28■□□□□ 0.68
SFXN1-212ENST00000515791 SPAG1Q07617 926 aa19.28■□□□□ 0.68
SFXN1-212ENST00000515791 TDGQ13569 410 aa19.28■□□□□ 0.68
SFXN1-212ENST00000515791 ENOX2Q16206 610 aaKnown RBP19.28■□□□□ 0.68
SFXN1-212ENST00000515791 UVSSAQ2YD98 709 aa19.28■□□□□ 0.68
SFXN1-212ENST00000515791 ZC2HC1CQ53FD0 456 aaPredicted RBP19.28■□□□□ 0.68
SFXN1-212ENST00000515791 VARS2Q5ST30 1063 aaKnown RBP19.28■□□□□ 0.68
SFXN1-212ENST00000515791 AXDND1Q5T1B0 1012 aaPredicted RBP19.28■□□□□ 0.68
SFXN1-212ENST00000515791 GRASPQ7Z6J2 395 aaPredicted RBP19.28■□□□□ 0.68
SFXN1-212ENST00000515791 SUGP1Q8IWZ8 645 aaKnown RBP19.28■□□□□ 0.68
SFXN1-212ENST00000515791 STAMQ92783 540 aa19.28■□□□□ 0.68
SFXN1-212ENST00000515791 SUSD3Q96L08 255 aa19.28■□□□□ 0.68
SFXN1-212ENST00000515791 ZSCAN16Q9H4T2 348 aaPredicted RBP19.28■□□□□ 0.68
SFXN1-212ENST00000515791 IGSF9Q9P2J2 1179 aa19.28■□□□□ 0.68
SFXN1-212ENST00000515791 STK17AQ9UEE5 414 aa19.28■□□□□ 0.68
SFXN1-212ENST00000515791 DUSP12Q9UNI6 340 aa19.28■□□□□ 0.68
SFXN1-212ENST00000515791 MYO15AQ9UKN7 3530 aa19.27■□□□□ 0.68
SFXN1-212ENST00000515791 MYMKA6NI61 221 aa19.27■□□□□ 0.68
SFXN1-212ENST00000515791 LACTBL1A8MY62 500 aa19.27■□□□□ 0.68
SFXN1-212ENST00000515791 ANHXE9PGG2 379 aa19.27■□□□□ 0.68
SFXN1-212ENST00000515791 HNRNPDLO14979 420 aaKnown RBP19.27■□□□□ 0.68
SFXN1-212ENST00000515791 OGTO15294 1046 aa19.27■□□□□ 0.68
SFXN1-212ENST00000515791 PPP1R37O75864 691 aa19.27■□□□□ 0.68
SFXN1-212ENST00000515791 LAMP2P13473 410 aa19.27■□□□□ 0.68
SFXN1-212ENST00000515791 GBP2P32456 591 aaPredicted RBP19.27■□□□□ 0.68
SFXN1-212ENST00000515791 LIG4P49917 911 aa19.27■□□□□ 0.68
SFXN1-212ENST00000515791 NTHL1P78549 312 aa19.27■□□□□ 0.68
SFXN1-212ENST00000515791 ROR1Q01973 937 aa19.27■□□□□ 0.68
SFXN1-212ENST00000515791 TCF15Q12870 199 aa19.27■□□□□ 0.68
SFXN1-212ENST00000515791 SLC7A14Q8TBB6 771 aa19.27■□□□□ 0.68
SFXN1-212ENST00000515791 IKZF4Q9H2S9 585 aa19.27■□□□□ 0.68
SFXN1-212ENST00000515791 PIDD1Q9HB75 910 aa19.27■□□□□ 0.68
SFXN1-212ENST00000515791 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.27■□□□□ 0.68
SFXN1-212ENST00000515791 CPSF3Q9UKF6 684 aaKnown RBP19.27■□□□□ 0.68
SFXN1-212ENST00000515791 STYXL1Q9Y6J8 313 aa19.27■□□□□ 0.68
SFXN1-212ENST00000515791 USP34Q70CQ2 3546 aa19.26■□□□□ 0.67
SFXN1-212ENST00000515791 WDR27A2RRH5 827 aa19.26■□□□□ 0.67
SFXN1-212ENST00000515791 TISP43B9A030 160 aa19.26■□□□□ 0.67
SFXN1-212ENST00000515791 NARSO43776 548 aaKnown RBP19.26■□□□□ 0.67
SFXN1-212ENST00000515791 CYP3A5P20815 502 aa19.26■□□□□ 0.67
SFXN1-212ENST00000515791 AARSP49588 968 aaKnown RBP eCLIP19.26■□□□□ 0.67
SFXN1-212ENST00000515791 PPM1LQ5SGD2 360 aa19.26■□□□□ 0.67
SFXN1-212ENST00000515791 LIN9Q5TKA1 542 aa19.26■□□□□ 0.67
SFXN1-212ENST00000515791 RTL10Q7L3V2 364 aa19.26■□□□□ 0.67
SFXN1-212ENST00000515791 DYMQ7RTS9 669 aa19.26■□□□□ 0.67
SFXN1-212ENST00000515791 ZNF720Q7Z2F6 126 aa19.26■□□□□ 0.67
SFXN1-212ENST00000515791 SLC44A3Q8N4M1 653 aa19.26■□□□□ 0.67
SFXN1-212ENST00000515791 RASSF8Q8NHQ8 419 aa19.26■□□□□ 0.67
SFXN1-212ENST00000515791 DDX12PQ92771 950 aa19.26■□□□□ 0.67
SFXN1-212ENST00000515791 BICD1Q96G01 975 aa19.26■□□□□ 0.67
SFXN1-212ENST00000515791 ANK1P16157 1881 aa19.26■□□□□ 0.67
SFXN1-212ENST00000515791 M0QZQ0 153 aa19.25■□□□□ 0.67
SFXN1-212ENST00000515791 CCL16O15467 120 aa19.25■□□□□ 0.67
SFXN1-212ENST00000515791 KRT18P05783 430 aaKnown RBP19.25■□□□□ 0.67
SFXN1-212ENST00000515791 NPR3P17342 541 aa19.25■□□□□ 0.67
SFXN1-212ENST00000515791 KYAT1Q16773 422 aa19.25■□□□□ 0.67
SFXN1-212ENST00000515791 RRAGBQ5VZM2 374 aa19.25■□□□□ 0.67
SFXN1-212ENST00000515791 POTEHQ6S545 545 aa19.25■□□□□ 0.67
SFXN1-212ENST00000515791 SFR1Q86XK3 245 aa19.25■□□□□ 0.67
SFXN1-212ENST00000515791 LINC00301Q8NCQ3 95 aa19.25■□□□□ 0.67
SFXN1-212ENST00000515791 ZNF461Q8TAF7 563 aa19.25■□□□□ 0.67
SFXN1-212ENST00000515791 ZHX3Q9H4I2 956 aa19.25■□□□□ 0.67
SFXN1-212ENST00000515791 HCFC1R1Q9NWW0 138 aa19.25■□□□□ 0.67
SFXN1-212ENST00000515791 DNMT3BQ9UBC3 853 aaKnown RBP19.25■□□□□ 0.67
SFXN1-212ENST00000515791 CCDC39Q9UFE4 941 aa19.25■□□□□ 0.67
SFXN1-212ENST00000515791 FBXL5Q9UKA1 691 aa19.25■□□□□ 0.67
SFXN1-212ENST00000515791 ARHGEF37A1IGU5 675 aa19.24■□□□□ 0.67
SFXN1-212ENST00000515791 FRMD3A2A2Y4 597 aa19.24■□□□□ 0.67
SFXN1-212ENST00000515791 TBCAO75347 108 aaKnown RBP19.24■□□□□ 0.67
SFXN1-212ENST00000515791 FSHRP23945 695 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms