RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 PDZD7Q9H5P4 517 aa16.57■□□□□ 0.24
THUMPD3-210ENST00000515662 ZFYVE28Q9HCC9 887 aa16.57■□□□□ 0.24
THUMPD3-210ENST00000515662 SETD4Q9NVD3 440 aa16.57■□□□□ 0.24
THUMPD3-210ENST00000515662 GJD2Q9UKL4 321 aa16.57■□□□□ 0.24
THUMPD3-210ENST00000515662 TARSL2A2RTX5 802 aaKnown RBP16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 RRN3P2A6NIE6 340 aa16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 KCNK3O14649 394 aa16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 F2P00734 622 aa16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 MCF2P10911 925 aa16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 CYP2B6P20813 491 aa16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 RGS2P41220 211 aa16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 VSNL1P62760 191 aa16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 TFAMQ00059 246 aaKnown RBP16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 CLEC16AQ2KHT3 1053 aa16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 WDR93Q6P2C0 686 aa16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 TLK2Q86UE8 772 aa16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 EFCAB13Q8IY85 973 aa16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 TMEM192Q8IY95 271 aa16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 LENG1Q96BZ8 264 aaPredicted RBP16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 PBKQ96KB5 322 aa16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 CALR3Q96L12 384 aaKnown RBP16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 IMPG2Q9BZV3 1241 aa16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 ARFGAP3Q9NP61 516 aa16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 CNTN6Q9UQ52 1028 aa16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 MYL6P60660 151 aa16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 ZNF677Q86XU0 584 aa16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 HNRNPLLQ8WVV9 542 aaKnown RBP16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 KAT2BQ92831 832 aa16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 HES6Q96HZ4 224 aa16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 RPF1Q9H9Y2 349 aaKnown RBP16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 CTTNBP2NLQ9P2B4 639 aa16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 AMFRQ9UKV5 643 aa16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 PCDHB4Q9Y5E5 795 aa16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 DOCK3Q8IZD9 2030 aa16.56■□□□□ 0.24
THUMPD3-210ENST00000515662 IL18RAPO95256 599 aa16.55■□□□□ 0.24
THUMPD3-210ENST00000515662 IGHA2P01877 340 aa16.55■□□□□ 0.24
THUMPD3-210ENST00000515662 CXCL8P10145 99 aa16.55■□□□□ 0.24
THUMPD3-210ENST00000515662 ARF4P18085 180 aaPredicted RBP16.55■□□□□ 0.24
THUMPD3-210ENST00000515662 CRHR2Q13324 411 aa16.55■□□□□ 0.24
THUMPD3-210ENST00000515662 ACAD10Q6JQN1 1059 aa16.55■□□□□ 0.24
THUMPD3-210ENST00000515662 CPB2Q96IY4 423 aa16.55■□□□□ 0.24
THUMPD3-210ENST00000515662 APBA2Q99767 749 aa16.55■□□□□ 0.24
THUMPD3-210ENST00000515662 TLL2Q9Y6L7 1015 aa16.55■□□□□ 0.24
THUMPD3-210ENST00000515662 CLSTN1O94985 981 aa16.55■□□□□ 0.24
THUMPD3-210ENST00000515662 CYP1A2P05177 515 aa16.55■□□□□ 0.24
THUMPD3-210ENST00000515662 TMEM191BP0C7N4 346 aa16.55■□□□□ 0.24
THUMPD3-210ENST00000515662 STAG3L1P0CL83 205 aa16.55■□□□□ 0.24
THUMPD3-210ENST00000515662 SMIM10L2AP0DMW4 78 aa16.55■□□□□ 0.24
THUMPD3-210ENST00000515662 SMIM10L2BP0DMW5 78 aa16.55■□□□□ 0.24
THUMPD3-210ENST00000515662 SGSM1Q2NKQ1 1148 aa16.55■□□□□ 0.24
THUMPD3-210ENST00000515662 TMEM270Q6UE05 265 aa16.55■□□□□ 0.24
THUMPD3-210ENST00000515662 ZNF410Q86VK4 478 aa16.55■□□□□ 0.24
THUMPD3-210ENST00000515662 UBR7Q8N806 425 aa16.55■□□□□ 0.24
THUMPD3-210ENST00000515662 SOCS4Q8WXH5 440 aa16.55■□□□□ 0.24
THUMPD3-210ENST00000515662 SCLT1Q96NL6 688 aa16.55■□□□□ 0.24
THUMPD3-210ENST00000515662 RBM12Q9NTZ6 932 aaKnown RBP16.55■□□□□ 0.24
THUMPD3-210ENST00000515662 TSPAN1O60635 241 aa16.54■□□□□ 0.24
THUMPD3-210ENST00000515662 MTA2O94776 668 aa16.54■□□□□ 0.24
THUMPD3-210ENST00000515662 TNNC2P02585 160 aa16.54■□□□□ 0.24
THUMPD3-210ENST00000515662 UNGP13051 313 aaPredicted RBP16.54■□□□□ 0.24
THUMPD3-210ENST00000515662 IRX5P78411 483 aaPredicted RBP16.54■□□□□ 0.24
THUMPD3-210ENST00000515662 TERF2Q15554 542 aa16.54■□□□□ 0.24
THUMPD3-210ENST00000515662 RBBP8NLQ8NC74 664 aaPredicted RBP16.54■□□□□ 0.24
THUMPD3-210ENST00000515662 NRCAMQ92823 1304 aa16.54■□□□□ 0.24
THUMPD3-210ENST00000515662 TNPO2O14787 897 aaKnown RBP16.53■□□□□ 0.24
THUMPD3-210ENST00000515662 MEFVO15553 781 aaPredicted RBP16.53■□□□□ 0.24
THUMPD3-210ENST00000515662 ATMINO43313 823 aaPredicted RBP16.53■□□□□ 0.24
THUMPD3-210ENST00000515662 GABPB1Q06547 395 aaPredicted RBP16.53■□□□□ 0.24
THUMPD3-210ENST00000515662 SREBF2Q12772 1141 aa16.53■□□□□ 0.24
THUMPD3-210ENST00000515662 TRPC3Q13507 836 aa16.53■□□□□ 0.24
THUMPD3-210ENST00000515662 C11orf63Q6NUN7 778 aa16.53■□□□□ 0.24
THUMPD3-210ENST00000515662 CCDC102AQ96A19 550 aa16.53■□□□□ 0.24
THUMPD3-210ENST00000515662 ANKRD36BP1Q96IX9 119 aa16.53■□□□□ 0.24
THUMPD3-210ENST00000515662 LRRC1Q9BTT6 524 aa16.53■□□□□ 0.24
THUMPD3-210ENST00000515662 SELENOOQ9BVL4 669 aa16.53■□□□□ 0.24
THUMPD3-210ENST00000515662 ADAMTS10Q9H324 1103 aa16.53■□□□□ 0.24
THUMPD3-210ENST00000515662 GTF3C4Q9UKN8 822 aa16.53■□□□□ 0.24
THUMPD3-210ENST00000515662 ANK1P16157 1881 aa16.53■□□□□ 0.24
THUMPD3-210ENST00000515662 ERLIN1O75477 346 aa16.53■□□□□ 0.24
THUMPD3-210ENST00000515662 ZNF132P52740 706 aa16.53■□□□□ 0.24
THUMPD3-210ENST00000515662 POU5F1Q01860 360 aaKnown RBP16.53■□□□□ 0.24
THUMPD3-210ENST00000515662 MFSD10Q14728 455 aa16.53■□□□□ 0.24
THUMPD3-210ENST00000515662 LONRF2Q1L5Z9 754 aa16.53■□□□□ 0.24
THUMPD3-210ENST00000515662 CCDC70Q6NSX1 233 aa16.53■□□□□ 0.24
THUMPD3-210ENST00000515662 ACTRT1Q8TDG2 376 aa16.53■□□□□ 0.24
THUMPD3-210ENST00000515662 ZBTB9Q96C00 473 aa16.53■□□□□ 0.24
THUMPD3-210ENST00000515662 ZNF653Q96CK0 615 aa16.53■□□□□ 0.24
THUMPD3-210ENST00000515662 NIF3L1Q9GZT8 377 aa16.53■□□□□ 0.24
THUMPD3-210ENST00000515662 XYLT2Q9H1B5 865 aa16.53■□□□□ 0.24
THUMPD3-210ENST00000515662 CHORDC1Q9UHD1 332 aaPredicted RBP16.53■□□□□ 0.24
THUMPD3-210ENST00000515662 MBLAC1A4D2B0 266 aaPredicted RBP16.52■□□□□ 0.24
THUMPD3-210ENST00000515662 LACTBL1A8MY62 500 aa16.52■□□□□ 0.24
THUMPD3-210ENST00000515662 CEP104O60308 925 aa16.52■□□□□ 0.24
THUMPD3-210ENST00000515662 ERLIN2O94905 339 aa16.52■□□□□ 0.24
THUMPD3-210ENST00000515662 CTGFP29279 349 aa16.52■□□□□ 0.24
THUMPD3-210ENST00000515662 RNASE9P60153 205 aaKnown RBP16.52■□□□□ 0.24
THUMPD3-210ENST00000515662 KYAT1Q16773 422 aa16.52■□□□□ 0.24
THUMPD3-210ENST00000515662 KIZQ2M2Z5 673 aa16.52■□□□□ 0.24
THUMPD3-210ENST00000515662 BEND6Q5SZJ8 279 aaPredicted RBP16.52■□□□□ 0.24
THUMPD3-210ENST00000515662 USP38Q8NB14 1042 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms