RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 FGFR1P11362 822 aa13.74□□□□□ -0.21
PHF3-212ENST00000515594 TAC1P20366 129 aa13.74□□□□□ -0.21
PHF3-212ENST00000515594 P3H1Q32P28 736 aa13.74□□□□□ -0.21
PHF3-212ENST00000515594 KRT39Q6A163 491 aa13.74□□□□□ -0.21
PHF3-212ENST00000515594 CC2D2BQ6DHV5 1058 aa13.74□□□□□ -0.21
PHF3-212ENST00000515594 TRMT10CQ7L0Y3 403 aaKnown RBP13.74□□□□□ -0.21
PHF3-212ENST00000515594 DDX27Q96GQ7 796 aaKnown RBP13.74□□□□□ -0.21
PHF3-212ENST00000515594 RUNDC3BQ96NL0 473 aa13.74□□□□□ -0.21
PHF3-212ENST00000515594 NT5C1BQ96P26 610 aa13.74□□□□□ -0.21
PHF3-212ENST00000515594 TMEM206Q9H813 350 aa13.74□□□□□ -0.21
PHF3-212ENST00000515594 C15orf41Q9Y2V0 281 aa13.74□□□□□ -0.21
PHF3-212ENST00000515594 H0Y3Z8 333 aa13.74□□□□□ -0.21
PHF3-212ENST00000515594 NEBLO76041 1014 aa13.74□□□□□ -0.21
PHF3-212ENST00000515594 CCNE2O96020 404 aa13.74□□□□□ -0.21
PHF3-212ENST00000515594 GSTA1P08263 222 aa13.74□□□□□ -0.21
PHF3-212ENST00000515594 FDX1P10109 184 aa13.74□□□□□ -0.21
PHF3-212ENST00000515594 NPR1P16066 1061 aa13.74□□□□□ -0.21
PHF3-212ENST00000515594 DSG3P32926 999 aa13.74□□□□□ -0.21
PHF3-212ENST00000515594 MSH2P43246 934 aa13.74□□□□□ -0.21
PHF3-212ENST00000515594 NPTX2P47972 431 aa13.74□□□□□ -0.21
PHF3-212ENST00000515594 ZNF268Q14587 947 aaPredicted RBP13.74□□□□□ -0.21
PHF3-212ENST00000515594 SYCP2LQ5T4T6 812 aa13.74□□□□□ -0.21
PHF3-212ENST00000515594 ERP27Q96DN0 273 aa13.74□□□□□ -0.21
PHF3-212ENST00000515594 MYLK2Q9H1R3 596 aa13.74□□□□□ -0.21
PHF3-212ENST00000515594 RAVER2Q9HCJ3 691 aaKnown RBP13.74□□□□□ -0.21
PHF3-212ENST00000515594 DONSONQ9NYP3 566 aa13.74□□□□□ -0.21
PHF3-212ENST00000515594 ADAM22Q9P0K1 906 aa13.74□□□□□ -0.21
PHF3-212ENST00000515594 SAE1Q9UBE0 346 aaPredicted RBP13.74□□□□□ -0.21
PHF3-212ENST00000515594 HAO1Q9UJM8 370 aa13.74□□□□□ -0.21
PHF3-212ENST00000515594 STK24Q9Y6E0 443 aa13.74□□□□□ -0.21
PHF3-212ENST00000515594 PTPRJQ12913 1337 aa13.73□□□□□ -0.21
PHF3-212ENST00000515594 TESPA1A2RU30 521 aaPredicted RBP13.73□□□□□ -0.21
PHF3-212ENST00000515594 YDJCA8MPS7 323 aa13.73□□□□□ -0.21
PHF3-212ENST00000515594 GGPS1O95749 300 aa13.73□□□□□ -0.21
PHF3-212ENST00000515594 ATF7P17544 494 aaPredicted RBP13.73□□□□□ -0.21
PHF3-212ENST00000515594 QARSP47897 775 aaKnown RBP13.73□□□□□ -0.21
PHF3-212ENST00000515594 CLEC16AQ2KHT3 1053 aa13.73□□□□□ -0.21
PHF3-212ENST00000515594 TKFCQ3LXA3 575 aa13.73□□□□□ -0.21
PHF3-212ENST00000515594 STRIP1Q5VSL9 837 aa13.73□□□□□ -0.21
PHF3-212ENST00000515594 TXNRD3NBQ6F5E7 133 aa13.73□□□□□ -0.21
PHF3-212ENST00000515594 MIS18BP1Q6P0N0 1132 aa13.73□□□□□ -0.21
PHF3-212ENST00000515594 FBXL13Q8NEE6 735 aa13.73□□□□□ -0.21
PHF3-212ENST00000515594 ZNF516Q92618 1163 aa13.73□□□□□ -0.21
PHF3-212ENST00000515594 SERPINB12Q96P63 405 aa13.73□□□□□ -0.21
PHF3-212ENST00000515594 TAAR1Q96RJ0 339 aa13.73□□□□□ -0.21
PHF3-212ENST00000515594 RBM15Q96T37 977 aaKnown RBP eCLIP13.73□□□□□ -0.211e-7■■■■■ 30
PHF3-212ENST00000515594 PITPNM3Q9BZ71 974 aa13.73□□□□□ -0.21
PHF3-212ENST00000515594 STMN4Q9H169 189 aaPredicted RBP13.73□□□□□ -0.21
PHF3-212ENST00000515594 RANBP17Q9H2T7 1088 aaKnown RBP13.73□□□□□ -0.21
PHF3-212ENST00000515594 ALG13Q9NP73 1137 aaKnown RBP13.73□□□□□ -0.21
PHF3-212ENST00000515594 WHRNQ9P202 907 aa13.73□□□□□ -0.21
PHF3-212ENST00000515594 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.73□□□□□ -0.21
PHF3-212ENST00000515594 ARL2BPQ9Y2Y0 163 aa13.73□□□□□ -0.21
PHF3-212ENST00000515594 TMX2Q9Y320 296 aa13.73□□□□□ -0.21
PHF3-212ENST00000515594 NUMBLQ9Y6R0 609 aa13.73□□□□□ -0.21
PHF3-212ENST00000515594 UMODL1Q5DID0 1318 aa13.73□□□□□ -0.21
PHF3-212ENST00000515594 RAD17O75943 681 aa13.73□□□□□ -0.21
PHF3-212ENST00000515594 MTA2O94776 668 aa13.73□□□□□ -0.21
PHF3-212ENST00000515594 CBX6O95503 412 aa13.73□□□□□ -0.21
PHF3-212ENST00000515594 ACOT2P49753 483 aa13.73□□□□□ -0.21
PHF3-212ENST00000515594 MTMR1Q13613 665 aa13.73□□□□□ -0.21
PHF3-212ENST00000515594 EFTUD2Q15029 972 aaKnown RBP eCLIP13.73□□□□□ -0.215e-6■■■□□ 14.6
PHF3-212ENST00000515594 PKN2Q16513 984 aaKnown RBP13.73□□□□□ -0.21
PHF3-212ENST00000515594 MCOLN2Q8IZK6 566 aa13.73□□□□□ -0.21
PHF3-212ENST00000515594 C12orf50Q8NA57 414 aaPredicted RBP13.73□□□□□ -0.21
PHF3-212ENST00000515594 KLF6Q99612 283 aaPredicted RBP13.73□□□□□ -0.21
PHF3-212ENST00000515594 TMX4Q9H1E5 349 aaPredicted RBP13.73□□□□□ -0.21
PHF3-212ENST00000515594 SAYSD1Q9NPB0 183 aa13.73□□□□□ -0.21
PHF3-212ENST00000515594 TBX20Q9UMR3 447 aa13.73□□□□□ -0.21
PHF3-212ENST00000515594 DOCK5Q9H7D0 1870 aa13.73□□□□□ -0.21
PHF3-212ENST00000515594 A0A1W2PPM1 405 aa13.72□□□□□ -0.21
PHF3-212ENST00000515594 RFX1P22670 979 aa13.72□□□□□ -0.21
PHF3-212ENST00000515594 ERFP50548 548 aa13.72□□□□□ -0.21
PHF3-212ENST00000515594 RPL7AP62424 266 aaKnown RBP13.72□□□□□ -0.21
PHF3-212ENST00000515594 GTF2BQ00403 316 aa13.72□□□□□ -0.21
PHF3-212ENST00000515594 TRIM68Q6AZZ1 485 aa13.72□□□□□ -0.21
PHF3-212ENST00000515594 ZNF365Q70YC5 407 aa13.72□□□□□ -0.21
PHF3-212ENST00000515594 ANKMY2Q8IV38 441 aa13.72□□□□□ -0.21
PHF3-212ENST00000515594 TMEM161BQ8NDZ6 487 aa13.72□□□□□ -0.21
PHF3-212ENST00000515594 EBF2Q9HAK2 575 aa13.72□□□□□ -0.21
PHF3-212ENST00000515594 MRPL11Q9Y3B7 192 aaKnown RBP13.72□□□□□ -0.21
PHF3-212ENST00000515594 COL11A2P13942 1736 aaPredicted RBP13.72□□□□□ -0.21
PHF3-212ENST00000515594 MYPNQ86TC9 1320 aa13.72□□□□□ -0.21
PHF3-212ENST00000515594 GOLGA8RI6L899 631 aa13.72□□□□□ -0.21
PHF3-212ENST00000515594 HNRNPDLO14979 420 aaKnown RBP13.72□□□□□ -0.21
PHF3-212ENST00000515594 ITIH2P19823 946 aa13.72□□□□□ -0.21
PHF3-212ENST00000515594 GCAP28676 217 aa13.72□□□□□ -0.21
PHF3-212ENST00000515594 NRLP54845 237 aa13.72□□□□□ -0.21
PHF3-212ENST00000515594 NOP14P78316 857 aaKnown RBP13.72□□□□□ -0.21
PHF3-212ENST00000515594 ZBTB41Q5SVQ8 909 aa13.72□□□□□ -0.21
PHF3-212ENST00000515594 GJD4Q96KN9 370 aaPredicted RBP13.72□□□□□ -0.21
PHF3-212ENST00000515594 UVRAGQ9P2Y5 699 aa13.72□□□□□ -0.21
PHF3-212ENST00000515594 PRKAG3Q9UGI9 489 aa13.72□□□□□ -0.21
PHF3-212ENST00000515594 DNPEPQ9ULA0 475 aa13.72□□□□□ -0.21
PHF3-212ENST00000515594 MYH9P35579 1960 aaKnown RBP13.72□□□□□ -0.21
PHF3-212ENST00000515594 ZNF536O15090 1300 aa13.72□□□□□ -0.21
PHF3-212ENST00000515594 GM2AP17900 193 aa13.72□□□□□ -0.21
PHF3-212ENST00000515594 PTK6Q13882 451 aa13.72□□□□□ -0.21
PHF3-212ENST00000515594 ANO5Q75V66 913 aa13.72□□□□□ -0.21
PHF3-212ENST00000515594 ROPN1BQ9BZX4 212 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms