RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 BMS1Q14692 1282 aaKnown RBP12.89□□□□□ -0.35
SNF8-215ENST00000515572 CT47A1Q5JQC4 288 aaPredicted RBP12.89□□□□□ -0.35
SNF8-215ENST00000515572 CAVIN1Q6NZI2 390 aaKnown RBP12.89□□□□□ -0.35
SNF8-215ENST00000515572 SASS6Q6UVJ0 657 aa12.89□□□□□ -0.35
SNF8-215ENST00000515572 TMEM173Q86WV6 379 aaPredicted RBP12.89□□□□□ -0.35
SNF8-215ENST00000515572 WDR49Q8IV35 697 aa12.89□□□□□ -0.35
SNF8-215ENST00000515572 ZC3H3Q8IXZ2 948 aaKnown RBP12.89□□□□□ -0.35
SNF8-215ENST00000515572 POF1BQ8WVV4 589 aa12.89□□□□□ -0.35
SNF8-215ENST00000515572 MRPL38Q96DV4 380 aaKnown RBP12.89□□□□□ -0.35
SNF8-215ENST00000515572 GUCD1Q96NT3 240 aa12.89□□□□□ -0.35
SNF8-215ENST00000515572 FNBP1Q96RU3 617 aa12.89□□□□□ -0.35
SNF8-215ENST00000515572 GOLGA2P5Q9HBQ8 144 aa12.89□□□□□ -0.35
SNF8-215ENST00000515572 TLR9Q9NR96 1032 aa12.89□□□□□ -0.35
SNF8-215ENST00000515572 MARCH5Q9NX47 278 aa12.89□□□□□ -0.35
SNF8-215ENST00000515572 TUBGCP4Q9UGJ1 667 aa12.89□□□□□ -0.35
SNF8-215ENST00000515572 RWDD2AQ9UIY3 292 aa12.89□□□□□ -0.35
SNF8-215ENST00000515572 RFXAPO00287 272 aa12.88□□□□□ -0.35
SNF8-215ENST00000515572 TULP1O00294 542 aaPredicted RBP12.88□□□□□ -0.35
SNF8-215ENST00000515572 PODXLO00592 558 aa12.88□□□□□ -0.35
SNF8-215ENST00000515572 SLC16A3O15427 465 aaKnown RBP12.88□□□□□ -0.35
SNF8-215ENST00000515572 TRAPPC3O43617 180 aa12.88□□□□□ -0.35
SNF8-215ENST00000515572 TNNC2P02585 160 aa12.88□□□□□ -0.35
SNF8-215ENST00000515572 TMEM191BP0C7N4 346 aa12.88□□□□□ -0.35
SNF8-215ENST00000515572 EPB41P11171 864 aaKnown RBP12.88□□□□□ -0.35
SNF8-215ENST00000515572 KRT13P13646 458 aa12.88□□□□□ -0.35
SNF8-215ENST00000515572 ERCC5P28715 1186 aaPredicted RBP12.88□□□□□ -0.35
SNF8-215ENST00000515572 AP3M2P53677 418 aa12.88□□□□□ -0.35
SNF8-215ENST00000515572 PMS1P54277 932 aaKnown RBP12.88□□□□□ -0.35
SNF8-215ENST00000515572 WNT7BP56706 349 aa12.88□□□□□ -0.35
SNF8-215ENST00000515572 TFAMQ00059 246 aaKnown RBP12.88□□□□□ -0.35
SNF8-215ENST00000515572 ELAVL2Q12926 359 aaKnown RBP12.88□□□□□ -0.35
SNF8-215ENST00000515572 DUOXA2Q1HG44 320 aa12.88□□□□□ -0.35
SNF8-215ENST00000515572 TTI2Q6NXR4 508 aa12.88□□□□□ -0.35
SNF8-215ENST00000515572 INTS8Q75QN2 995 aaKnown RBP12.88□□□□□ -0.35
SNF8-215ENST00000515572 EFCAB13Q8IY85 973 aa12.88□□□□□ -0.35
SNF8-215ENST00000515572 FAM186BQ8IYM0 893 aa12.88□□□□□ -0.35
SNF8-215ENST00000515572 TMC2Q8TDI7 906 aa12.88□□□□□ -0.35
SNF8-215ENST00000515572 BCL7CQ8WUZ0 217 aaPredicted RBP12.88□□□□□ -0.35
SNF8-215ENST00000515572 CCDC127Q96BQ5 260 aa12.88□□□□□ -0.35
SNF8-215ENST00000515572 ANKRD36BP1Q96IX9 119 aa12.88□□□□□ -0.35
SNF8-215ENST00000515572 CEP63Q96MT8 703 aa12.88□□□□□ -0.35
SNF8-215ENST00000515572 PAAF1Q9BRP4 392 aa12.88□□□□□ -0.35
SNF8-215ENST00000515572 DPP3Q9NY33 737 aa12.88□□□□□ -0.35
SNF8-215ENST00000515572 TMEM63CQ9P1W3 806 aa12.88□□□□□ -0.35
SNF8-215ENST00000515572 CACNG4Q9UBN1 327 aa12.88□□□□□ -0.35
SNF8-215ENST00000515572 CTNND2Q9UQB3 1225 aa12.88□□□□□ -0.35
SNF8-215ENST00000515572 CHD7Q9P2D1 2997 aa12.88□□□□□ -0.35
SNF8-215ENST00000515572 TRANK1O15050 2925 aa12.88□□□□□ -0.35
SNF8-215ENST00000515572 TRIM49BA6NDI0 452 aa12.87□□□□□ -0.35
SNF8-215ENST00000515572 AKAP3O75969 853 aa12.87□□□□□ -0.35
SNF8-215ENST00000515572 LETM1O95202 739 aaPredicted RBP12.87□□□□□ -0.35
SNF8-215ENST00000515572 FGFR1OPO95684 399 aaKnown RBP12.87□□□□□ -0.35
SNF8-215ENST00000515572 EFEMP2O95967 443 aa12.87□□□□□ -0.35
SNF8-215ENST00000515572 SOD2P04179 222 aa12.87□□□□□ -0.35
SNF8-215ENST00000515572 DLATP10515 647 aaKnown RBP12.87□□□□□ -0.35
SNF8-215ENST00000515572 FOSL2P15408 326 aa12.87□□□□□ -0.35
SNF8-215ENST00000515572 TNNI1P19237 187 aa12.87□□□□□ -0.35
SNF8-215ENST00000515572 DNAJB1P25685 340 aa12.87□□□□□ -0.35
SNF8-215ENST00000515572 CASP4P49662 377 aa12.87□□□□□ -0.35
SNF8-215ENST00000515572 CLDN10P78369 228 aa12.87□□□□□ -0.35
SNF8-215ENST00000515572 ADGRE1Q14246 886 aa12.87□□□□□ -0.35
SNF8-215ENST00000515572 DPCR1Q3MIW9 517 aa12.87□□□□□ -0.35
SNF8-215ENST00000515572 TIGD5Q53EQ6 642 aa12.87□□□□□ -0.35
SNF8-215ENST00000515572 C9orf57Q5W0N0 161 aa12.87□□□□□ -0.35
SNF8-215ENST00000515572 FUT10Q6P4F1 479 aa12.87□□□□□ -0.35
SNF8-215ENST00000515572 RNF168Q8IYW5 571 aaPredicted RBP12.87□□□□□ -0.35
SNF8-215ENST00000515572 VPS52Q8N1B4 723 aa12.87□□□□□ -0.35
SNF8-215ENST00000515572 CSGALNACT2Q8N6G5 542 aa12.87□□□□□ -0.35
SNF8-215ENST00000515572 PARD3BQ8TEW8 1205 aa12.87□□□□□ -0.35
SNF8-215ENST00000515572 MYLIPQ8WY64 445 aa12.87□□□□□ -0.35
SNF8-215ENST00000515572 RABGGTAQ92696 567 aa12.87□□□□□ -0.35
SNF8-215ENST00000515572 CGRRF1Q99675 332 aa12.87□□□□□ -0.35
SNF8-215ENST00000515572 TCF25Q9BQ70 676 aa12.87□□□□□ -0.35
SNF8-215ENST00000515572 NGRNQ9NPE2 291 aaKnown RBP12.87□□□□□ -0.35
SNF8-215ENST00000515572 INTS13Q9NVM9 706 aa12.87□□□□□ -0.35
SNF8-215ENST00000515572 ITGA11Q9UKX5 1188 aa12.87□□□□□ -0.35
SNF8-215ENST00000515572 SSX2IPQ9Y2D8 614 aa12.87□□□□□ -0.35
SNF8-215ENST00000515572 NUB1Q9Y5A7 615 aa12.87□□□□□ -0.35
SNF8-215ENST00000515572 ANO9A1A5B4 782 aa12.86□□□□□ -0.35
SNF8-215ENST00000515572 PIRO00625 290 aa12.86□□□□□ -0.35
SNF8-215ENST00000515572 IKBKBO14920 756 aa12.86□□□□□ -0.35
SNF8-215ENST00000515572 FSCN2O14926 492 aa12.86□□□□□ -0.35
SNF8-215ENST00000515572 GNA14O95837 355 aa12.86□□□□□ -0.35
SNF8-215ENST00000515572 CTSAP10619 480 aa12.86□□□□□ -0.35
SNF8-215ENST00000515572 IGFBP4P22692 258 aa12.86□□□□□ -0.35
SNF8-215ENST00000515572 PNPLA4P41247 253 aa12.86□□□□□ -0.35
SNF8-215ENST00000515572 VAMP7P51809 220 aa12.86□□□□□ -0.35
SNF8-215ENST00000515572 MCCD1P59942 119 aaPredicted RBP12.86□□□□□ -0.35
SNF8-215ENST00000515572 BFSP1Q12934 665 aa12.86□□□□□ -0.35
SNF8-215ENST00000515572 CAMK1Q14012 370 aa12.86□□□□□ -0.35
SNF8-215ENST00000515572 SMC1AQ14683 1233 aaKnown RBP12.86□□□□□ -0.35
SNF8-215ENST00000515572 STX1AQ16623 288 aa12.86□□□□□ -0.35
SNF8-215ENST00000515572 TMC7Q7Z402 723 aa12.86□□□□□ -0.35
SNF8-215ENST00000515572 GPR65Q8IYL9 337 aa12.86□□□□□ -0.35
SNF8-215ENST00000515572 MICAL1Q8TDZ2 1067 aa12.86□□□□□ -0.35
SNF8-215ENST00000515572 HASPINQ8TF76 798 aa12.86□□□□□ -0.35
SNF8-215ENST00000515572 PPP2R3CQ969Q6 453 aa12.86□□□□□ -0.35
SNF8-215ENST00000515572 DUSP9Q99956 384 aaKnown RBP12.86□□□□□ -0.35
SNF8-215ENST00000515572 HERC2P3Q9BVR0 1158 aa12.86□□□□□ -0.35
SNF8-215ENST00000515572 VN1R3Q9BXE9 311 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms