RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 PRSS36Q5K4E3 855 aa17.31■□□□□ 0.36
LMNA-223ENST00000515459 NECAB1Q8N987 351 aa17.31■□□□□ 0.36
LMNA-223ENST00000515459 CORO1BQ9BR76 489 aa17.31■□□□□ 0.36
LMNA-223ENST00000515459 KIFC3Q9BVG8 833 aa17.31■□□□□ 0.36
LMNA-223ENST00000515459 TRMT61BQ9BVS5 477 aaKnown RBP17.31■□□□□ 0.36
LMNA-223ENST00000515459 TOPORSQ9NS56 1045 aaPredicted RBP17.31■□□□□ 0.36
LMNA-223ENST00000515459 GMEB2Q9UKD1 530 aa17.31■□□□□ 0.36
LMNA-223ENST00000515459 USP18Q9UMW8 372 aa17.31■□□□□ 0.36
LMNA-223ENST00000515459 NDRG2Q9UN36 371 aaKnown RBP17.31■□□□□ 0.36
LMNA-223ENST00000515459 TICRRQ7Z2Z1 1910 aa17.3■□□□□ 0.36
LMNA-223ENST00000515459 SMIM28A0A1B0GU29 152 aa17.3■□□□□ 0.36
LMNA-223ENST00000515459 ZNF197O14709 1029 aa17.3■□□□□ 0.36
LMNA-223ENST00000515459 MICAL2O94851 1124 aa17.3■□□□□ 0.36
LMNA-223ENST00000515459 ATF2P15336 505 aa17.3■□□□□ 0.36
LMNA-223ENST00000515459 FCARP24071 287 aa17.3■□□□□ 0.36
LMNA-223ENST00000515459 FOSBP53539 338 aa17.3■□□□□ 0.36
LMNA-223ENST00000515459 NRLP54845 237 aa17.3■□□□□ 0.36
LMNA-223ENST00000515459 GRM2Q14416 872 aa17.3■□□□□ 0.36
LMNA-223ENST00000515459 PPP2R5DQ14738 602 aa17.3■□□□□ 0.36
LMNA-223ENST00000515459 ME3Q16798 604 aa17.3■□□□□ 0.36
LMNA-223ENST00000515459 FAM78AQ5JUQ0 283 aa17.3■□□□□ 0.36
LMNA-223ENST00000515459 NT5DC1Q5TFE4 455 aa17.3■□□□□ 0.36
LMNA-223ENST00000515459 TCEAL8Q8IYN2 117 aa17.3■□□□□ 0.36
LMNA-223ENST00000515459 IRF7Q92985 503 aa17.3■□□□□ 0.36
LMNA-223ENST00000515459 GTF3C6Q969F1 213 aa17.3■□□□□ 0.36
LMNA-223ENST00000515459 RTKNQ9BST9 563 aa17.3■□□□□ 0.36
LMNA-223ENST00000515459 IER2Q9BTL4 223 aa17.3■□□□□ 0.36
LMNA-223ENST00000515459 CHRDQ9H2X0 955 aa17.3■□□□□ 0.36
LMNA-223ENST00000515459 CYP4F11Q9HBI6 524 aa17.3■□□□□ 0.36
LMNA-223ENST00000515459 SLC38A7Q9NVC3 462 aa17.3■□□□□ 0.36
LMNA-223ENST00000515459 TNFSF13BQ9Y275 285 aa17.3■□□□□ 0.36
LMNA-223ENST00000515459 COL4A2P08572 1712 aa17.3■□□□□ 0.36
LMNA-223ENST00000515459 H7C4K7 107 aa17.29■□□□□ 0.36
LMNA-223ENST00000515459 K7ERI5 159 aa17.29■□□□□ 0.36
LMNA-223ENST00000515459 SYN3O14994 580 aa17.29■□□□□ 0.36
LMNA-223ENST00000515459 TGM1P22735 817 aa17.29■□□□□ 0.36
LMNA-223ENST00000515459 ARPP19P56211 112 aa17.29■□□□□ 0.36
LMNA-223ENST00000515459 SOX4Q06945 474 aaPredicted RBP17.29■□□□□ 0.36
LMNA-223ENST00000515459 MAMSTRQ6ZN01 415 aa17.29■□□□□ 0.36
LMNA-223ENST00000515459 PDZD4Q76G19 769 aaPredicted RBP17.29■□□□□ 0.36
LMNA-223ENST00000515459 ZNF687Q8N1G0 1237 aa17.29■□□□□ 0.36
LMNA-223ENST00000515459 NSUN7Q8NE18 718 aaKnown RBP17.29■□□□□ 0.36
LMNA-223ENST00000515459 KIFAP3Q92845 792 aa17.29■□□□□ 0.36
LMNA-223ENST00000515459 TCEAL4Q96EI5 215 aa17.29■□□□□ 0.36
LMNA-223ENST00000515459 CCDC94Q9BW85 323 aaPredicted RBP17.29■□□□□ 0.36
LMNA-223ENST00000515459 POLD4Q9HCU8 107 aa17.29■□□□□ 0.36
LMNA-223ENST00000515459 RAB23Q9ULC3 237 aa17.29■□□□□ 0.36
LMNA-223ENST00000515459 INSL5Q9Y5Q6 135 aa17.29■□□□□ 0.36
LMNA-223ENST00000515459 PODXLO00592 558 aa17.28■□□□□ 0.36
LMNA-223ENST00000515459 PSMC3P17980 439 aa17.28■□□□□ 0.36
LMNA-223ENST00000515459 MUTP22033 750 aa17.28■□□□□ 0.36
LMNA-223ENST00000515459 GRM5P41594 1212 aa17.28■□□□□ 0.36
LMNA-223ENST00000515459 XKR4Q5GH76 650 aa17.28■□□□□ 0.36
LMNA-223ENST00000515459 CYP4A22Q5TCH4 519 aa17.28■□□□□ 0.36
LMNA-223ENST00000515459 TPGS2Q68CL5 300 aa17.28■□□□□ 0.36
LMNA-223ENST00000515459 HAUS3Q68CZ6 603 aa17.28■□□□□ 0.36
LMNA-223ENST00000515459 ALKAL1Q6UXT8 129 aa17.28■□□□□ 0.36
LMNA-223ENST00000515459 ELMOD1Q8N336 334 aa17.28■□□□□ 0.36
LMNA-223ENST00000515459 CEP120Q8N960 986 aa17.28■□□□□ 0.36
LMNA-223ENST00000515459 ASB16Q96NS5 453 aa17.28■□□□□ 0.36
LMNA-223ENST00000515459 ZNF334Q9HCZ1 680 aaPredicted RBP17.28■□□□□ 0.36
LMNA-223ENST00000515459 TRPV5Q9NQA5 729 aa17.28■□□□□ 0.36
LMNA-223ENST00000515459 CITO14578 2027 aa17.28■□□□□ 0.36
LMNA-223ENST00000515459 DCDC2BA2VCK2 349 aa17.27■□□□□ 0.36
LMNA-223ENST00000515459 LARGE1O95461 756 aa17.27■□□□□ 0.36
LMNA-223ENST00000515459 SEC24AO95486 1093 aa17.27■□□□□ 0.36
LMNA-223ENST00000515459 OR52Z1P0C646 297 aa17.27■□□□□ 0.36
LMNA-223ENST00000515459 TDGF1P13385 188 aa17.27■□□□□ 0.36
LMNA-223ENST00000515459 GDI1P31150 447 aa17.27■□□□□ 0.36
LMNA-223ENST00000515459 CCR2P41597 374 aa17.27■□□□□ 0.36
LMNA-223ENST00000515459 ANAPC15P60006 121 aa17.27■□□□□ 0.36
LMNA-223ENST00000515459 OSTNP61366 133 aa17.27■□□□□ 0.36
LMNA-223ENST00000515459 ZNF568Q3ZCX4 644 aa17.27■□□□□ 0.36
LMNA-223ENST00000515459 IQCEQ6IPM2 695 aa17.27■□□□□ 0.36
LMNA-223ENST00000515459 VITQ6UXI7 678 aa17.27■□□□□ 0.36
LMNA-223ENST00000515459 CELF5Q8N6W0 485 aaKnown RBP17.27■□□□□ 0.36
LMNA-223ENST00000515459 FAM3CQ92520 227 aa17.27■□□□□ 0.36
LMNA-223ENST00000515459 SMARCD2Q92925 531 aa17.27■□□□□ 0.36
LMNA-223ENST00000515459 CDT1Q9H211 546 aa17.27■□□□□ 0.36
LMNA-223ENST00000515459 BHMT2Q9H2M3 363 aa17.27■□□□□ 0.36
LMNA-223ENST00000515459 LMAN1LQ9HAT1 526 aa17.27■□□□□ 0.36
LMNA-223ENST00000515459 PARD6AQ9NPB6 346 aa17.27■□□□□ 0.36
LMNA-223ENST00000515459 FBXL5Q9UKA1 691 aa17.27■□□□□ 0.36
LMNA-223ENST00000515459 NUB1Q9Y5A7 615 aa17.27■□□□□ 0.36
LMNA-223ENST00000515459 CACNA1BQ00975 2339 aa17.27■□□□□ 0.35
LMNA-223ENST00000515459 PHLPP2Q6ZVD8 1323 aa17.26■□□□□ 0.35
LMNA-223ENST00000515459 NRG2O14511 850 aaPredicted RBP17.26■□□□□ 0.35
LMNA-223ENST00000515459 JAK2O60674 1132 aa17.26■□□□□ 0.35
LMNA-223ENST00000515459 RPL9P32969 192 aaKnown RBP17.26■□□□□ 0.35
LMNA-223ENST00000515459 CCR3P51677 355 aa17.26■□□□□ 0.35
LMNA-223ENST00000515459 ORC2Q13416 577 aaPredicted RBP17.26■□□□□ 0.35
LMNA-223ENST00000515459 MRPL58Q14197 206 aaKnown RBP17.26■□□□□ 0.35
LMNA-223ENST00000515459 SAFBQ15424 915 aaKnown RBP eCLIP17.26■□□□□ 0.35
LMNA-223ENST00000515459 CTXN3Q4LDR2 81 aa17.26■□□□□ 0.35
LMNA-223ENST00000515459 LAIR1Q6GTX8 287 aa17.26■□□□□ 0.35
LMNA-223ENST00000515459 MAP4K3Q8IVH8 894 aa17.26■□□□□ 0.35
LMNA-223ENST00000515459 DEPDC1BQ8WUY9 529 aa17.26■□□□□ 0.35
LMNA-223ENST00000515459 ZNF512Q96ME7 567 aaPredicted RBP17.26■□□□□ 0.35
LMNA-223ENST00000515459 ZSWIM3Q96MP5 696 aa17.26■□□□□ 0.35
LMNA-223ENST00000515459 ZMAT2Q96NC0 199 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms