RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 ITGA11Q9UKX5 1188 aa22.68■■□□□ 1.22
LSM6-207ENST00000515311 PMM2O15305 246 aa22.67■■□□□ 1.22
LSM6-207ENST00000515311 TLL1O43897 1013 aa22.67■■□□□ 1.22
LSM6-207ENST00000515311 N4BP1O75113 896 aaKnown RBP22.67■■□□□ 1.22
LSM6-207ENST00000515311 C4BPAP04003 597 aaKnown RBP22.67■■□□□ 1.22
LSM6-207ENST00000515311 GCLMP48507 274 aa22.67■■□□□ 1.22
LSM6-207ENST00000515311 FMO5P49326 533 aa22.67■■□□□ 1.22
LSM6-207ENST00000515311 SOX4Q06945 474 aaPredicted RBP22.67■■□□□ 1.22
LSM6-207ENST00000515311 BTG3Q14201 252 aaPredicted RBP22.67■■□□□ 1.22
LSM6-207ENST00000515311 ZACNQ401N2 412 aa22.67■■□□□ 1.22
LSM6-207ENST00000515311 VWA3BQ502W6 1294 aa22.67■■□□□ 1.22
LSM6-207ENST00000515311 PAN2Q504Q3 1202 aaKnown RBP22.67■■□□□ 1.22
LSM6-207ENST00000515311 MIIPQ5JXC2 388 aa22.67■■□□□ 1.22
LSM6-207ENST00000515311 KRT39Q6A163 491 aa22.67■■□□□ 1.22
LSM6-207ENST00000515311 NDST4Q9H3R1 872 aa22.67■■□□□ 1.22
LSM6-207ENST00000515311 TAB2Q9NYJ8 693 aa22.67■■□□□ 1.22
LSM6-207ENST00000515311 RANBP2P49792 3224 aaKnown RBP22.67■■□□□ 1.22
LSM6-207ENST00000515311 KIAA1671Q9BY89 1806 aa22.66■■□□□ 1.22
LSM6-207ENST00000515311 P4HA2O15460 535 aa22.66■■□□□ 1.22
LSM6-207ENST00000515311 KCNA4P22459 653 aa22.66■■□□□ 1.22
LSM6-207ENST00000515311 LRPAP1P30533 357 aa22.66■■□□□ 1.22
LSM6-207ENST00000515311 RPL9P32969 192 aaKnown RBP22.66■■□□□ 1.22
LSM6-207ENST00000515311 MXI1P50539 228 aa22.66■■□□□ 1.22
LSM6-207ENST00000515311 COPB1P53618 953 aaKnown RBP22.66■■□□□ 1.22
LSM6-207ENST00000515311 TDRD10Q5VZ19 366 aaKnown RBP22.66■■□□□ 1.22
LSM6-207ENST00000515311 SV2AQ7L0J3 742 aa22.66■■□□□ 1.22
LSM6-207ENST00000515311 TRAPPC11Q7Z392 1133 aa22.66■■□□□ 1.22
LSM6-207ENST00000515311 ZNF280BQ86YH2 543 aa22.66■■□□□ 1.22
LSM6-207ENST00000515311 COLGALT2Q8IYK4 626 aa22.66■■□□□ 1.22
LSM6-207ENST00000515311 C1orf127Q8N9H9 656 aa22.66■■□□□ 1.22
LSM6-207ENST00000515311 DDX27Q96GQ7 796 aaKnown RBP22.66■■□□□ 1.22
LSM6-207ENST00000515311 FAM193BQ96PV7 902 aaPredicted RBP22.66■■□□□ 1.22
LSM6-207ENST00000515311 CARNS1A5YM72 827 aa22.65■■□□□ 1.22
LSM6-207ENST00000515311 DDHD2O94830 711 aa22.65■■□□□ 1.22
LSM6-207ENST00000515311 MYL7Q01449 175 aa22.65■■□□□ 1.22
LSM6-207ENST00000515311 CBWD6Q4V339 395 aa22.65■■□□□ 1.22
LSM6-207ENST00000515311 CBWD3Q5JTY5 395 aa22.65■■□□□ 1.22
LSM6-207ENST00000515311 CBWD5Q5RIA9 395 aa22.65■■□□□ 1.22
LSM6-207ENST00000515311 CHRDL2Q6WN34 429 aa22.65■■□□□ 1.22
LSM6-207ENST00000515311 CXorf38Q8TB03 319 aa22.65■■□□□ 1.22
LSM6-207ENST00000515311 FAM84AQ96KN4 292 aa22.65■■□□□ 1.22
LSM6-207ENST00000515311 TMEM175Q9BSA9 504 aa22.65■■□□□ 1.22
LSM6-207ENST00000515311 NRDE2Q9H7Z3 1164 aa22.65■■□□□ 1.22
LSM6-207ENST00000515311 ANO9A1A5B4 782 aa22.64■■□□□ 1.21
LSM6-207ENST00000515311 LGALS16A8MUM7 142 aa22.64■■□□□ 1.21
LSM6-207ENST00000515311 B4GALT3O60512 393 aa22.64■■□□□ 1.21
LSM6-207ENST00000515311 ITGB3P05106 788 aa22.64■■□□□ 1.21
LSM6-207ENST00000515311 BIRC3Q13489 604 aa22.64■■□□□ 1.21
LSM6-207ENST00000515311 C9orf57Q5W0N0 161 aa22.64■■□□□ 1.21
LSM6-207ENST00000515311 FAM109BQ6ICB4 259 aaPredicted RBP22.64■■□□□ 1.21
LSM6-207ENST00000515311 VPS16Q9H269 839 aa22.64■■□□□ 1.21
LSM6-207ENST00000515311 CWH43Q9H720 699 aa22.64■■□□□ 1.21
LSM6-207ENST00000515311 MMRN2Q9H8L6 949 aa22.64■■□□□ 1.21
LSM6-207ENST00000515311 GOLGA2P5Q9HBQ8 144 aa22.64■■□□□ 1.21
LSM6-207ENST00000515311 SIX4Q9UIU6 781 aa22.64■■□□□ 1.21
LSM6-207ENST00000515311 COQ4Q9Y3A0 265 aa22.64■■□□□ 1.21
LSM6-207ENST00000515311 PCDHA11Q9Y5I1 949 aa22.64■■□□□ 1.21
LSM6-207ENST00000515311 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.63■■□□□ 1.21
LSM6-207ENST00000515311 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.63■■□□□ 1.21
LSM6-207ENST00000515311 A0A1W2PPC1 479 aa22.63■■□□□ 1.21
LSM6-207ENST00000515311 GTPBP10A4D1E9 387 aaKnown RBP22.63■■□□□ 1.21
LSM6-207ENST00000515311 CASTOR2A6NHX0 329 aa22.63■■□□□ 1.21
LSM6-207ENST00000515311 ZC3H11AO75152 810 aaKnown RBP eCLIP22.63■■□□□ 1.21
LSM6-207ENST00000515311 PHACTR2O75167 634 aa22.63■■□□□ 1.21
LSM6-207ENST00000515311 SERPINC1P01008 464 aa22.63■■□□□ 1.21
LSM6-207ENST00000515311 GUCY2FP51841 1108 aa22.63■■□□□ 1.21
LSM6-207ENST00000515311 RBP5P82980 135 aa22.63■■□□□ 1.21
LSM6-207ENST00000515311 FANCCQ00597 558 aa22.63■■□□□ 1.21
LSM6-207ENST00000515311 CETN1Q12798 172 aa22.63■■□□□ 1.21
LSM6-207ENST00000515311 UPP1Q16831 310 aa22.63■■□□□ 1.21
LSM6-207ENST00000515311 UVSSAQ2YD98 709 aa22.63■■□□□ 1.21
LSM6-207ENST00000515311 FILIP1LQ4L180 1135 aa22.63■■□□□ 1.21
LSM6-207ENST00000515311 FIBCD1Q8N539 461 aa22.63■■□□□ 1.21
LSM6-207ENST00000515311 LRRC52Q8N7C0 313 aa22.63■■□□□ 1.21
LSM6-207ENST00000515311 FBXL13Q8NEE6 735 aa22.63■■□□□ 1.21
LSM6-207ENST00000515311 DNAJB4Q9UDY4 337 aa22.63■■□□□ 1.21
LSM6-207ENST00000515311 MRPL42Q9Y6G3 142 aaKnown RBP22.63■■□□□ 1.21
LSM6-207ENST00000515311 NLRC5Q86WI3 1866 aa22.62■■□□□ 1.21
LSM6-207ENST00000515311 PIRO00625 290 aa22.62■■□□□ 1.21
LSM6-207ENST00000515311 VNN1O95497 513 aa22.62■■□□□ 1.21
LSM6-207ENST00000515311 LAG3P18627 525 aa22.62■■□□□ 1.21
LSM6-207ENST00000515311 POLR2BP30876 1174 aaKnown RBP22.62■■□□□ 1.21
LSM6-207ENST00000515311 RABGGTBP53611 331 aa22.62■■□□□ 1.21
LSM6-207ENST00000515311 NCOA4Q13772 614 aa22.62■■□□□ 1.21
LSM6-207ENST00000515311 TAS1R2Q8TE23 839 aa22.62■■□□□ 1.21
LSM6-207ENST00000515311 CLP1Q92989 425 aaKnown RBP22.62■■□□□ 1.21
LSM6-207ENST00000515311 HCSTQ9UBK5 93 aa22.62■■□□□ 1.21
LSM6-207ENST00000515311 A0A1B0GTH6 734 aa22.61■■□□□ 1.21
LSM6-207ENST00000515311 GRXCR1A8MXD5 290 aa22.61■■□□□ 1.21
LSM6-207ENST00000515311 TMEM189-UBE2V1I3L0A0 370 aa22.61■■□□□ 1.21
LSM6-207ENST00000515311 PES1O00541 588 aaKnown RBP22.61■■□□□ 1.21
LSM6-207ENST00000515311 PODXLO00592 558 aa22.61■■□□□ 1.21
LSM6-207ENST00000515311 HLA-DRAP01903 254 aa22.61■■□□□ 1.21
LSM6-207ENST00000515311 ALDH2P05091 517 aa22.61■■□□□ 1.21
LSM6-207ENST00000515311 PAX3P23760 479 aa22.61■■□□□ 1.21
LSM6-207ENST00000515311 SCN1AP35498 2009 aa22.61■■□□□ 1.21
LSM6-207ENST00000515311 PNPLA4P41247 253 aa22.61■■□□□ 1.21
LSM6-207ENST00000515311 PIK3CAP42336 1068 aa22.61■■□□□ 1.21
LSM6-207ENST00000515311 CLCNKBP51801 687 aa22.61■■□□□ 1.21
LSM6-207ENST00000515311 BCAR1P56945 870 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms