RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 MAFGO15525 162 aa16.89■□□□□ 0.29
TRIM41-207ENST00000515223 AKT1P31749 480 aa16.89■□□□□ 0.29
TRIM41-207ENST00000515223 KLK7P49862 253 aa16.89■□□□□ 0.29
TRIM41-207ENST00000515223 MGAT5BQ3V5L5 792 aa16.89■□□□□ 0.29
TRIM41-207ENST00000515223 TMEM143Q96AN5 459 aa16.89■□□□□ 0.29
TRIM41-207ENST00000515223 FLT1P17948 1338 aa16.89■□□□□ 0.29
TRIM41-207ENST00000515223 C3orf70A6NLC5 250 aaPredicted RBP16.88■□□□□ 0.29
TRIM41-207ENST00000515223 OR1G1P47890 313 aa16.88■□□□□ 0.29
TRIM41-207ENST00000515223 TEDDM1Q5T9Z0 273 aa16.88■□□□□ 0.29
TRIM41-207ENST00000515223 AP1ARQ63HQ0 302 aa16.88■□□□□ 0.29
TRIM41-207ENST00000515223 PATL1Q86TB9 770 aaKnown RBP16.88■□□□□ 0.29
TRIM41-207ENST00000515223 IGDCC4Q8TDY8 1250 aa16.88■□□□□ 0.29
TRIM41-207ENST00000515223 F5H423 210 aaPredicted RBP16.88■□□□□ 0.29
TRIM41-207ENST00000515223 FASTKD1Q53R41 847 aaKnown RBP16.88■□□□□ 0.29
TRIM41-207ENST00000515223 PPHLN1Q8NEY8 458 aaKnown RBP16.88■□□□□ 0.29
TRIM41-207ENST00000515223 MYOZ2Q9NPC6 264 aa16.88■□□□□ 0.29
TRIM41-207ENST00000515223 STX18Q9P2W9 335 aaKnown RBP16.88■□□□□ 0.29
TRIM41-207ENST00000515223 TSR3Q9UJK0 312 aaKnown RBP16.88■□□□□ 0.29
TRIM41-207ENST00000515223 SNX12Q9UMY4 172 aa16.88■□□□□ 0.29
TRIM41-207ENST00000515223 PCDHB7Q9Y5E2 793 aa16.88■□□□□ 0.29
TRIM41-207ENST00000515223 PSMD14O00487 310 aa16.88■□□□□ 0.29
TRIM41-207ENST00000515223 OLFML3Q9NRN5 406 aa16.88■□□□□ 0.29
TRIM41-207ENST00000515223 ARHGAP10A1A4S6 786 aa16.88■□□□□ 0.29
TRIM41-207ENST00000515223 TYK2P29597 1187 aa16.88■□□□□ 0.29
TRIM41-207ENST00000515223 AARSP49588 968 aaKnown RBP eCLIP16.88■□□□□ 0.298e-8■■□□□ 13.1
TRIM41-207ENST00000515223 PPP2R2AP63151 447 aa16.88■□□□□ 0.29
TRIM41-207ENST00000515223 ZNF211Q13398 564 aaPredicted RBP16.88■□□□□ 0.29
TRIM41-207ENST00000515223 SV2CQ496J9 727 aa16.88■□□□□ 0.29
TRIM41-207ENST00000515223 RNF135Q8IUD6 432 aa16.88■□□□□ 0.29
TRIM41-207ENST00000515223 GLYCTKQ8IVS8 523 aa16.88■□□□□ 0.29
TRIM41-207ENST00000515223 CNPY4Q8N129 248 aa16.88■□□□□ 0.29
TRIM41-207ENST00000515223 ATP11CQ8NB49 1132 aa16.88■□□□□ 0.29
TRIM41-207ENST00000515223 YIPF2Q9BWQ6 316 aa16.88■□□□□ 0.29
TRIM41-207ENST00000515223 SLC30A1Q9Y6M5 507 aa16.88■□□□□ 0.29
TRIM41-207ENST00000515223 HBP1O60381 514 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 SGSM1Q2NKQ1 1148 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 ZC3H12BQ5HYM0 836 aaKnown RBP16.87■□□□□ 0.29
TRIM41-207ENST00000515223 ADCK2Q7Z695 626 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 DEFB129Q9H1M3 183 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 RGL1Q9NZL6 768 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 SCHIP1Q9P0W5 487 aaPredicted RBP16.87■□□□□ 0.29
TRIM41-207ENST00000515223 H3BQF6 201 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 RALBP11234 206 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 TMEM132BQ14DG7 1078 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 MUC3BQ9H195 1237 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 SPATS2LQ9NUQ6 558 aaKnown RBP16.87■□□□□ 0.29
TRIM41-207ENST00000515223 USP31Q70CQ4 1352 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 EFCAB14O75071 495 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 HMBSP08397 361 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 SKIP12755 728 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 RBBP7Q16576 425 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 GRAMD1BQ3KR37 738 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 IL31Q6EBC2 164 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 CCNI2Q6ZMN8 369 aaPredicted RBP16.87■□□□□ 0.29
TRIM41-207ENST00000515223 STAG2Q8N3U4 1231 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 KCNB2Q92953 911 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 SLITRK1Q96PX8 696 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 COL3A1P02461 1466 aaPredicted RBP16.87■□□□□ 0.29
TRIM41-207ENST00000515223 NBPF26B4DH59 902 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 TBX3O15119 743 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 ATP9BO43861 1147 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 IL18RAPO95256 599 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 GTF2A2P52657 109 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 LAMC2Q13753 1193 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 EFTUD2Q15029 972 aaKnown RBP eCLIP16.87■□□□□ 0.291e-6■■■■□ 21.6
TRIM41-207ENST00000515223 CDC42EP5Q6NZY7 148 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 NBPF10Q6P3W6 841 aaKnown RBP16.87■□□□□ 0.29
TRIM41-207ENST00000515223 NBPF15Q8N660 670 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 PRMT7Q9NVM4 692 aaPredicted RBP16.87■□□□□ 0.29
TRIM41-207ENST00000515223 A0A1W2PQC6 194 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 KRT14P02533 472 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 TRIM4Q9C037 500 aa16.87■□□□□ 0.29
TRIM41-207ENST00000515223 CFAP99D6REC4 459 aa16.86■□□□□ 0.29
TRIM41-207ENST00000515223 EIF3HO15372 352 aaKnown RBP eCLIP16.86■□□□□ 0.296e-8■■■■■ 30.5
TRIM41-207ENST00000515223 XRRA1Q6P2D8 792 aa16.86■□□□□ 0.29
TRIM41-207ENST00000515223 EPM2AIP1Q7L775 607 aaPredicted RBP16.86■□□□□ 0.29
TRIM41-207ENST00000515223 TMEM169Q96HH4 297 aa16.86■□□□□ 0.29
TRIM41-207ENST00000515223 PLA2G12BQ9BX93 195 aa16.86■□□□□ 0.29
TRIM41-207ENST00000515223 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.86■□□□□ 0.29
TRIM41-207ENST00000515223 NEXMIFQ5QGS0 1516 aa16.86■□□□□ 0.29
TRIM41-207ENST00000515223 KDM1AO60341 852 aa16.86■□□□□ 0.29
TRIM41-207ENST00000515223 PDIA2Q13087 525 aaKnown RBP16.86■□□□□ 0.29
TRIM41-207ENST00000515223 LMBRD2Q68DH5 695 aaPredicted RBP16.86■□□□□ 0.29
TRIM41-207ENST00000515223 PARP9Q8IXQ6 854 aa16.86■□□□□ 0.29
TRIM41-207ENST00000515223 SELENONQ9NZV5 590 aa16.86■□□□□ 0.29
TRIM41-207ENST00000515223 KCND2Q9NZV8 630 aa16.86■□□□□ 0.29
TRIM41-207ENST00000515223 DCDC2CA8MYV0 355 aa16.86■□□□□ 0.29
TRIM41-207ENST00000515223 SETSIPP0DME0 302 aa16.86■□□□□ 0.29
TRIM41-207ENST00000515223 RGS2P41220 211 aa16.86■□□□□ 0.29
TRIM41-207ENST00000515223 SBK1Q52WX2 424 aa16.86■□□□□ 0.29
TRIM41-207ENST00000515223 PIP4K2CQ8TBX8 421 aa16.86■□□□□ 0.29
TRIM41-207ENST00000515223 KCNV2Q8TDN2 545 aa16.86■□□□□ 0.29
TRIM41-207ENST00000515223 TAF1DQ9H5J8 278 aaPredicted RBP16.86■□□□□ 0.29
TRIM41-207ENST00000515223 VIPAS39Q9H9C1 493 aa16.86■□□□□ 0.29
TRIM41-207ENST00000515223 CDV3Q9UKY7 258 aaKnown RBP16.86■□□□□ 0.29
TRIM41-207ENST00000515223 INTUQ9ULD6 942 aa16.86■□□□□ 0.29
TRIM41-207ENST00000515223 PRR12Q9ULL5 1215 aa16.86■□□□□ 0.29
TRIM41-207ENST00000515223 LRG1P02750 347 aa16.86■□□□□ 0.29
TRIM41-207ENST00000515223 ALDH7A1P49419 539 aaKnown RBP16.86■□□□□ 0.29
TRIM41-207ENST00000515223 EMC2Q15006 297 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms