RNA–Protein interactions for RNA: ENST00000515160.5

CAST-243, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-243ENST00000515160 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.74□□□□□ -1.33
CAST-243ENST00000515160 SWAP70Q9UH65 585 aa6.74□□□□□ -1.33
CAST-243ENST00000515160 WASF3Q9UPY6 502 aa6.74□□□□□ -1.33
CAST-243ENST00000515160 RNF114Q9Y508 228 aa6.74□□□□□ -1.33
CAST-243ENST00000515160 PCDHB1Q9Y5F3 818 aa6.74□□□□□ -1.33
CAST-243ENST00000515160 CICQ96RK0 1608 aaPredicted RBP6.74□□□□□ -1.33
CAST-243ENST00000515160 TNS2Q63HR2 1409 aa6.74□□□□□ -1.33
CAST-243ENST00000515160 WDR17Q8IZU2 1322 aa6.74□□□□□ -1.33
CAST-243ENST00000515160 EIF3AQ14152 1382 aaKnown RBP6.73□□□□□ -1.33
CAST-243ENST00000515160 ABCC6O95255 1503 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 PRR19A6NJB7 356 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 F8W031 263 aaPredicted RBP6.73□□□□□ -1.33
CAST-243ENST00000515160 PHGDHO43175 533 aaKnown RBP6.73□□□□□ -1.33
CAST-243ENST00000515160 NCK2O43639 380 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 CYBBP04839 570 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 ENO2P09104 434 aaPredicted RBP6.73□□□□□ -1.33
CAST-243ENST00000515160 COL6A1P12109 1028 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 APEX1P27695 318 aaKnown RBP6.73□□□□□ -1.33
CAST-243ENST00000515160 TECP42680 631 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 HK3P52790 923 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 PPP3CAQ08209 521 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 ZNF543Q08ER8 600 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 NFATC3Q12968 1075 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 BNIP3Q12983 259 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 TLDC1Q6P9B6 456 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 PAQR3Q6TCH7 311 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 LRSAM1Q6UWE0 723 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 SYDE1Q6ZW31 735 aaPredicted RBP6.73□□□□□ -1.33
CAST-243ENST00000515160 TMC6Q7Z403 805 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 PCGF5Q86SE9 256 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 ZDHHC13Q8IUH4 622 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 MYCT1Q8N699 235 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 C3orf20Q8ND61 904 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 WDR48Q8TAF3 677 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 NSUN6Q8TEA1 469 aaKnown RBP6.73□□□□□ -1.33
CAST-243ENST00000515160 ARL8AQ96BM9 186 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 ISCA1Q9BUE6 129 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 MYLK2Q9H1R3 596 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 ZHX3Q9H4I2 956 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 ATP6V0A4Q9HBG4 840 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 ZNF287Q9HBT7 754 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 MAP3K20Q9NYL2 800 aaKnown RBP6.73□□□□□ -1.33
CAST-243ENST00000515160 HSPBP1Q9NZL4 362 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 KCMF1Q9P0J7 381 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 POGKQ9P215 609 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 USP6P35125 1406 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 LY75O60449 1722 aa6.73□□□□□ -1.33
CAST-243ENST00000515160 PIK3C2AO00443 1686 aa6.72□□□□□ -1.33
CAST-243ENST00000515160 A0A087WV62 115 aa6.72□□□□□ -1.33
CAST-243ENST00000515160 POM121BA6NF01 834 aa6.72□□□□□ -1.33
CAST-243ENST00000515160 H3BUI4 141 aa6.72□□□□□ -1.33
CAST-243ENST00000515160 SGTAO43765 313 aa6.72□□□□□ -1.33
CAST-243ENST00000515160 PSPNO60542 156 aa6.72□□□□□ -1.33
CAST-243ENST00000515160 CUTAO60888 179 aa6.72□□□□□ -1.33
CAST-243ENST00000515160 LRG1P02750 347 aa6.72□□□□□ -1.33
CAST-243ENST00000515160 HSD3B1P14060 373 aa6.72□□□□□ -1.33
CAST-243ENST00000515160 PNLIPP16233 465 aa6.72□□□□□ -1.33
CAST-243ENST00000515160 BDNFP23560 247 aa6.72□□□□□ -1.33
CAST-243ENST00000515160 MAPK10P53779 464 aa6.72□□□□□ -1.33
CAST-243ENST00000515160 ICA1Q05084 483 aa6.72□□□□□ -1.33
CAST-243ENST00000515160 NOGQ13253 232 aa6.72□□□□□ -1.33
CAST-243ENST00000515160 NLRX1Q86UT6 975 aa6.72□□□□□ -1.33
CAST-243ENST00000515160 SLC51AQ86UW1 340 aa6.72□□□□□ -1.33
CAST-243ENST00000515160 RHOT1Q8IXI2 618 aa6.72□□□□□ -1.33
CAST-243ENST00000515160 OR2I1PQ8NGU4 316 aa6.72□□□□□ -1.33
CAST-243ENST00000515160 IL31RAQ8NI17 732 aa6.72□□□□□ -1.33
CAST-243ENST00000515160 ANKS1AQ92625 1134 aa6.72□□□□□ -1.33
CAST-243ENST00000515160 SLC35A4Q96G79 324 aa6.72□□□□□ -1.33
CAST-243ENST00000515160 UNKQ9C0B0 810 aaKnown RBP6.72□□□□□ -1.33
CAST-243ENST00000515160 PNPLA8Q9NP80 782 aa6.72□□□□□ -1.33
CAST-243ENST00000515160 TNFRSF12AQ9NP84 129 aa6.72□□□□□ -1.33
CAST-243ENST00000515160 LMBRD1Q9NUN5 540 aa6.72□□□□□ -1.33
CAST-243ENST00000515160 STAP2Q9UGK3 403 aa6.72□□□□□ -1.33
CAST-243ENST00000515160 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.72□□□□□ -1.33
CAST-243ENST00000515160 OGDHLQ9ULD0 1010 aa6.72□□□□□ -1.33
CAST-243ENST00000515160 KIAA1551Q9HCM1 1747 aa6.71□□□□□ -1.34
CAST-243ENST00000515160 A0A1W2PPL8 197 aa6.71□□□□□ -1.34
CAST-243ENST00000515160 ZNF839A8K0R7 811 aa6.71□□□□□ -1.34
CAST-243ENST00000515160 DDX3XO00571 662 aaKnown RBP eCLIP6.71□□□□□ -1.342e-6■□□□□ 8.5
CAST-243ENST00000515160 ARIH2O95376 493 aa6.71□□□□□ -1.34
CAST-243ENST00000515160 POLD1P28340 1107 aa6.71□□□□□ -1.34
CAST-243ENST00000515160 MAN1A1P33908 653 aa6.71□□□□□ -1.34
CAST-243ENST00000515160 NKX6-1P78426 367 aaPredicted RBP6.71□□□□□ -1.34
CAST-243ENST00000515160 PFKPQ01813 784 aa6.71□□□□□ -1.34
CAST-243ENST00000515160 BLMHQ13867 455 aa6.71□□□□□ -1.34
CAST-243ENST00000515160 SLC4A8Q2Y0W8 1093 aa6.71□□□□□ -1.34
CAST-243ENST00000515160 CCDC38Q502W7 563 aa6.71□□□□□ -1.34
CAST-243ENST00000515160 PGBD2Q6P3X8 592 aa6.71□□□□□ -1.34
CAST-243ENST00000515160 TOM1L2Q6ZVM7 507 aa6.71□□□□□ -1.34
CAST-243ENST00000515160 HEATR3Q7Z4Q2 680 aa6.71□□□□□ -1.34
CAST-243ENST00000515160 BMP8AQ7Z5Y6 402 aa6.71□□□□□ -1.34
CAST-243ENST00000515160 FAM126BQ8IXS8 530 aa6.71□□□□□ -1.34
CAST-243ENST00000515160 GPR156Q8NFN8 814 aa6.71□□□□□ -1.34
CAST-243ENST00000515160 IGDCC4Q8TDY8 1250 aa6.71□□□□□ -1.34
CAST-243ENST00000515160 BRI3BPQ8WY22 251 aa6.71□□□□□ -1.34
CAST-243ENST00000515160 ZC3H10Q96K80 434 aaKnown RBP6.71□□□□□ -1.34
CAST-243ENST00000515160 CLPTM1LQ96KA5 538 aa6.71□□□□□ -1.34
CAST-243ENST00000515160 FAM167AQ96KS9 214 aa6.71□□□□□ -1.34
CAST-243ENST00000515160 CDC5LQ99459 802 aaKnown RBP6.71□□□□□ -1.34
CAST-243ENST00000515160 TMX4Q9H1E5 349 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms