RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 APOA4P06727 396 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 KRT4P19013 534 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 KRT2P35908 639 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 MAPKAPK2P49137 400 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 RNASELQ05823 741 aaKnown RBP7.67□□□□□ -1.18
NIPBL-208ENST00000514335 AMHR2Q16671 573 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 KYAT1Q16773 422 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 GEN1Q17RS7 908 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 CFAP221Q4G0U5 840 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 TMEM154Q6P9G4 183 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 FAM124AQ86V42 546 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 NOSTRINQ8IVI9 506 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 IL17REQ8NFR9 667 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 NSUN6Q8TEA1 469 aaKnown RBP7.67□□□□□ -1.18
NIPBL-208ENST00000514335 ZNF594Q96JF6 807 aaPredicted RBP7.67□□□□□ -1.18
NIPBL-208ENST00000514335 CCDC77Q9BR77 488 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 NUDT16L1Q9BRJ7 211 aaKnown RBP7.67□□□□□ -1.18
NIPBL-208ENST00000514335 ACPTQ9BZG2 426 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 LMAN2LQ9H0V9 348 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 GOLPH3LQ9H4A5 285 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 DENND2DQ9H6A0 471 aaPredicted RBP7.67□□□□□ -1.18
NIPBL-208ENST00000514335 USH1CQ9Y6N9 552 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 KIAA0232Q92628 1395 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 ACEP12821 1306 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 FAM237AA0A1B0GTK4 181 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 RAD51BO15315 384 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 DNAJB5O75953 348 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 POLR2MP0CAP2 368 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 CALM1P0DP23 149 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 CALM2P0DP24 149 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 CALM3P0DP25 149 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 COL6A2P12110 1019 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 HOXB1P14653 301 aaPredicted RBP7.67□□□□□ -1.18
NIPBL-208ENST00000514335 CPB1P15086 417 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 AKR1B1P15121 316 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 TRAP1Q12931 704 aaKnown RBP7.67□□□□□ -1.18
NIPBL-208ENST00000514335 NONOQ15233 471 aaKnown RBP eCLIP7.67□□□□□ -1.18
NIPBL-208ENST00000514335 RTP2Q5QGT7 225 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 LDHAL6AQ6ZMR3 332 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 KIF6Q6ZMV9 814 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 ANKMY2Q8IV38 441 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 NKAIN4Q8IVV8 208 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 LRRN4CLQ8ND94 238 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 BSNDQ8WZ55 320 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 STARD8Q92502 1023 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 RUBCNQ92622 972 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 FAM149B1Q96BN6 582 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 CCDC8Q9H0W5 538 aaPredicted RBP7.67□□□□□ -1.18
NIPBL-208ENST00000514335 CDH19Q9H159 772 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 THAP9Q9H5L6 903 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 NRBP2Q9NSY0 501 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 PAQR5Q9NXK6 330 aaPredicted RBP7.67□□□□□ -1.18
NIPBL-208ENST00000514335 SLC39A1Q9NY26 324 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 CABP1Q9NZU7 370 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 AFF4Q9UHB7 1163 aaKnown RBP7.67□□□□□ -1.18
NIPBL-208ENST00000514335 ARHGEF37A1IGU5 675 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 EIF4E1BA6NMX2 242 aaKnown RBP7.66□□□□□ -1.18
NIPBL-208ENST00000514335 EYA2O00167 538 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 N4BP3O15049 544 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 BUB1BO60566 1050 aaPredicted RBP7.66□□□□□ -1.18
NIPBL-208ENST00000514335 KCNH1O95259 989 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 CAPNS1P04632 268 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 SNRPAP09012 282 aaKnown RBP7.66□□□□□ -1.18
NIPBL-208ENST00000514335 HSMCR30P0CW71 290 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 CYP2A6P11509 494 aaPredicted RBP7.66□□□□□ -1.18
NIPBL-208ENST00000514335 CCNA2P20248 432 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 HTR2BP41595 481 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 CHMP4BP1P59074 171 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 COG7P83436 770 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 ARHGAP4P98171 946 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 FRG1Q14331 258 aaKnown RBP7.66□□□□□ -1.18
NIPBL-208ENST00000514335 VARS2Q5ST30 1063 aaKnown RBP7.66□□□□□ -1.18
NIPBL-208ENST00000514335 MEX3BQ6ZN04 569 aaKnown RBP7.66□□□□□ -1.18
NIPBL-208ENST00000514335 BEND4Q6ZU67 534 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 CYP4V2Q6ZWL3 525 aaPredicted RBP7.66□□□□□ -1.18
NIPBL-208ENST00000514335 GPR142Q7Z601 462 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 ANKRD13CQ8N6S4 541 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 FAM133AQ8N9E0 248 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 USB1Q9BQ65 265 aaKnown RBP7.66□□□□□ -1.18
NIPBL-208ENST00000514335 PAIP1Q9H074 479 aaKnown RBP7.66□□□□□ -1.18
NIPBL-208ENST00000514335 TFB2MQ9H5Q4 396 aaKnown RBP7.66□□□□□ -1.18
NIPBL-208ENST00000514335 MRPL39Q9NYK5 338 aaKnown RBP7.66□□□□□ -1.18
NIPBL-208ENST00000514335 CTNNAL1Q9UBT7 734 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 SCAF8Q9UPN6 1271 aaKnown RBP7.66□□□□□ -1.18
NIPBL-208ENST00000514335 INPP5FQ9Y2H2 1132 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 AXIN2Q9Y2T1 843 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 CAPN9O14815 690 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 DYNC1LI2O43237 492 aaPredicted RBP7.66□□□□□ -1.18
NIPBL-208ENST00000514335 SRGAP3O43295 1099 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 EOMESO95936 686 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 SLC26A3P40879 764 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 PTPN9P43378 593 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 TUBP50607 506 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 ADCY7P51828 1080 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 ZNF135P52742 658 aaPredicted RBP7.66□□□□□ -1.18
NIPBL-208ENST00000514335 CARD18P57730 90 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 SSTP61278 116 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 PLCB3Q01970 1234 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 C2orf54Q08AI8 447 aa7.66□□□□□ -1.18
NIPBL-208ENST00000514335 ADAM9Q13443 819 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms