RNA–Protein interactions for RNA: ENST00000513678.5

MATR3-222, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-222	ENST00000513678	LARP4B	Q92615	738 aa	Known RBP	18.37	■□□□□ 0.53
MATR3-222	ENST00000513678	PARVG	Q9HBI0	331 aa		18.37	■□□□□ 0.53
MATR3-222	ENST00000513678	ANKFY1	Q9P2R3	1169 aa		18.37	■□□□□ 0.53
MATR3-222	ENST00000513678	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	18.37	■□□□□ 0.53
MATR3-222	ENST00000513678	CDY1	Q9Y6F8	540 aa		18.37	■□□□□ 0.53
MATR3-222	ENST00000513678	DOCK6	Q96HP0	2047 aa		18.37	■□□□□ 0.53
MATR3-222	ENST00000513678	NPHP3-ACAD11	A0A0J9YXS1	232 aa		18.36	■□□□□ 0.53
MATR3-222	ENST00000513678	STX6	O43752	255 aa		18.36	■□□□□ 0.53
MATR3-222	ENST00000513678	HARS	P12081	509 aa	Known RBP	18.36	■□□□□ 0.53
MATR3-222	ENST00000513678	PDIA4	P13667	645 aa	Known RBP	18.36	■□□□□ 0.53
MATR3-222	ENST00000513678	NPR3	P17342	541 aa		18.36	■□□□□ 0.53
MATR3-222	ENST00000513678	MYH11	P35749	1972 aa		18.36	■□□□□ 0.53
MATR3-222	ENST00000513678	CACNB1	Q02641	598 aa	Predicted RBP	18.36	■□□□□ 0.53
MATR3-222	ENST00000513678	HTR4	Q13639	388 aa		18.36	■□□□□ 0.53
MATR3-222	ENST00000513678	UVSSA	Q2YD98	709 aa		18.36	■□□□□ 0.53
MATR3-222	ENST00000513678	SLC10A6	Q3KNW5	377 aa		18.36	■□□□□ 0.53
MATR3-222	ENST00000513678	SLC8B1	Q6J4K2	584 aa		18.36	■□□□□ 0.53
MATR3-222	ENST00000513678	GRASP	Q7Z6J2	395 aa	Predicted RBP	18.36	■□□□□ 0.53
MATR3-222	ENST00000513678	SLC44A3	Q8N4M1	653 aa		18.36	■□□□□ 0.53
MATR3-222	ENST00000513678	SLC7A14	Q8TBB6	771 aa		18.36	■□□□□ 0.53
MATR3-222	ENST00000513678	HAPLN2	Q9GZV7	340 aa		18.36	■□□□□ 0.53
MATR3-222	ENST00000513678	MFSD1	Q9H3U5	465 aa		18.36	■□□□□ 0.53
MATR3-222	ENST00000513678	STK17A	Q9UEE5	414 aa		18.36	■□□□□ 0.53
MATR3-222	ENST00000513678	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	18.36	■□□□□ 0.53
MATR3-222	ENST00000513678	VPS13A	Q96RL7	3174 aa		18.36	■□□□□ 0.53
MATR3-222	ENST00000513678	PDCD11	Q14690	1871 aa	Known RBP	18.35	■□□□□ 0.53
MATR3-222	ENST00000513678	SYN3	O14994	580 aa		18.35	■□□□□ 0.53
MATR3-222	ENST00000513678	CCL16	O15467	120 aa		18.35	■□□□□ 0.53
MATR3-222	ENST00000513678	CLDN3	O15551	220 aa		18.35	■□□□□ 0.53
MATR3-222	ENST00000513678	TBC1D4	O60343	1298 aa		18.35	■□□□□ 0.53
MATR3-222	ENST00000513678	SRF	P11831	508 aa		18.35	■□□□□ 0.53
MATR3-222	ENST00000513678	AOC1	P19801	751 aa		18.35	■□□□□ 0.53
MATR3-222	ENST00000513678	FSHR	P23945	695 aa		18.35	■□□□□ 0.53
MATR3-222	ENST00000513678	RPL9	P32969	192 aa	Known RBP	18.35	■□□□□ 0.53
MATR3-222	ENST00000513678	MCM6	Q14566	821 aa		18.35	■□□□□ 0.53
MATR3-222	ENST00000513678	SLC39A14	Q15043	492 aa		18.35	■□□□□ 0.53
MATR3-222	ENST00000513678	KYAT1	Q16773	422 aa		18.35	■□□□□ 0.53
MATR3-222	ENST00000513678	AXDND1	Q5T1B0	1012 aa	Predicted RBP	18.35	■□□□□ 0.53
MATR3-222	ENST00000513678	RASSF8	Q8NHQ8	419 aa		18.35	■□□□□ 0.53
MATR3-222	ENST00000513678	C18orf25	Q96B23	403 aa	Predicted RBP	18.35	■□□□□ 0.53
MATR3-222	ENST00000513678	EPSTI1	Q96J88	318 aa		18.35	■□□□□ 0.53
MATR3-222	ENST00000513678	FIZ1	Q96SL8	496 aa		18.35	■□□□□ 0.53
MATR3-222	ENST00000513678	IRF2BPL	Q9H1B7	796 aa		18.35	■□□□□ 0.53
MATR3-222	ENST00000513678	ST6GALNAC4	Q9H4F1	302 aa		18.35	■□□□□ 0.53
MATR3-222	ENST00000513678	PLEKHA5	Q9HAU0	1116 aa		18.35	■□□□□ 0.53
MATR3-222	ENST00000513678	WNT16	Q9UBV4	365 aa		18.35	■□□□□ 0.53
MATR3-222	ENST00000513678	TRAK2	O60296	914 aa		18.34	■□□□□ 0.53
MATR3-222	ENST00000513678	XYLB	O75191	536 aa		18.34	■□□□□ 0.53
MATR3-222	ENST00000513678	FAM13A	O94988	1023 aa		18.34	■□□□□ 0.53
MATR3-222	ENST00000513678	MARCKS	P29966	332 aa	Predicted RBP	18.34	■□□□□ 0.53
MATR3-222	ENST00000513678	NASP	P49321	788 aa	Predicted RBP	18.34	■□□□□ 0.53
MATR3-222	ENST00000513678	NTHL1	P78549	312 aa		18.34	■□□□□ 0.53
MATR3-222	ENST00000513678	ROR1	Q01973	937 aa		18.34	■□□□□ 0.53
MATR3-222	ENST00000513678	MRPL58	Q14197	206 aa	Known RBP	18.34	■□□□□ 0.53
MATR3-222	ENST00000513678	SEZ6	Q53EL9	994 aa		18.34	■□□□□ 0.53
MATR3-222	ENST00000513678	VARS2	Q5ST30	1063 aa	Known RBP	18.34	■□□□□ 0.53
MATR3-222	ENST00000513678	FAM173B	Q6P4H8	233 aa		18.34	■□□□□ 0.53
MATR3-222	ENST00000513678	USP49	Q70CQ1	688 aa		18.34	■□□□□ 0.53
MATR3-222	ENST00000513678	SIX5	Q8N196	739 aa		18.34	■□□□□ 0.53
MATR3-222	ENST00000513678	USP28	Q96RU2	1077 aa		18.34	■□□□□ 0.53
MATR3-222	ENST00000513678	TSPAN18	Q96SJ8	248 aa		18.34	■□□□□ 0.53
MATR3-222	ENST00000513678	CCDC39	Q9UFE4	941 aa		18.34	■□□□□ 0.53
MATR3-222	ENST00000513678	CDH7	Q9ULB5	785 aa		18.34	■□□□□ 0.53
MATR3-222	ENST00000513678	TBX20	Q9UMR3	447 aa		18.34	■□□□□ 0.53
MATR3-222	ENST00000513678	DMD	P11532	3685 aa		18.34	■□□□□ 0.53
MATR3-222	ENST00000513678	TTC26	A0AVF1	554 aa		18.33	■□□□□ 0.52
MATR3-222	ENST00000513678	FAM189A1	O60320	539 aa		18.33	■□□□□ 0.52
MATR3-222	ENST00000513678	ABLIM3	O94929	683 aa		18.33	■□□□□ 0.52
MATR3-222	ENST00000513678	CLTA	P09496	248 aa		18.33	■□□□□ 0.52
MATR3-222	ENST00000513678	CXCL8	P10145	99 aa		18.33	■□□□□ 0.52
MATR3-222	ENST00000513678	GTF2B	Q00403	316 aa		18.33	■□□□□ 0.52
MATR3-222	ENST00000513678	MAP4K3	Q8IVH8	894 aa		18.33	■□□□□ 0.52
MATR3-222	ENST00000513678	MYCT1	Q8N699	235 aa		18.33	■□□□□ 0.52
MATR3-222	ENST00000513678	ZNF461	Q8TAF7	563 aa		18.33	■□□□□ 0.52
MATR3-222	ENST00000513678	SUSD3	Q96L08	255 aa		18.33	■□□□□ 0.52
MATR3-222	ENST00000513678	FAM86C1	Q9NVL1	165 aa		18.33	■□□□□ 0.52
MATR3-222	ENST00000513678	TUBGCP4	Q9UGJ1	667 aa		18.33	■□□□□ 0.52
MATR3-222	ENST00000513678	FBXL21	Q9UKT6	434 aa		18.33	■□□□□ 0.52
MATR3-222	ENST00000513678	NUMBL	Q9Y6R0	609 aa		18.33	■□□□□ 0.52
MATR3-222	ENST00000513678	RIF1	Q5UIP0	2472 aa	Known RBP	18.33	■□□□□ 0.52
MATR3-222	ENST00000513678	NOTCH4	Q99466	2003 aa		18.33	■□□□□ 0.52
MATR3-222	ENST00000513678	WDR27	A2RRH5	827 aa		18.32	■□□□□ 0.52
MATR3-222	ENST00000513678	KRBA1	A5PL33	1030 aa		18.32	■□□□□ 0.52
MATR3-222	ENST00000513678		H0Y858	1186 aa		18.32	■□□□□ 0.52
MATR3-222	ENST00000513678	TBCA	O75347	108 aa	Known RBP	18.32	■□□□□ 0.52
MATR3-222	ENST00000513678	KRT18	P05783	430 aa	Known RBP	18.32	■□□□□ 0.52
MATR3-222	ENST00000513678	ADRB2	P07550	413 aa		18.32	■□□□□ 0.52
MATR3-222	ENST00000513678	CFH	P08603	1231 aa		18.32	■□□□□ 0.52
MATR3-222	ENST00000513678	TXLNA	P40222	546 aa		18.32	■□□□□ 0.52
MATR3-222	ENST00000513678	DHX8	Q14562	1220 aa	Known RBP	18.32	■□□□□ 0.52
MATR3-222	ENST00000513678	ZBTB6	Q15916	424 aa		18.32	■□□□□ 0.52
MATR3-222	ENST00000513678	KRI1	Q8N9T8	703 aa	Known RBP	18.32	■□□□□ 0.52
MATR3-222	ENST00000513678	FLCN	Q8NFG4	579 aa		18.32	■□□□□ 0.52
MATR3-222	ENST00000513678	FGF13	Q92913	245 aa		18.32	■□□□□ 0.52
MATR3-222	ENST00000513678	FGF14	Q92915	247 aa		18.32	■□□□□ 0.52
MATR3-222	ENST00000513678	SLC2A4RG	Q9NR83	387 aa		18.32	■□□□□ 0.52
MATR3-222	ENST00000513678	DNMT3B	Q9UBC3	853 aa	Known RBP	18.32	■□□□□ 0.52
MATR3-222	ENST00000513678	KCNH3	Q9ULD8	1083 aa		18.32	■□□□□ 0.52
MATR3-222	ENST00000513678	NUB1	Q9Y5A7	615 aa		18.32	■□□□□ 0.52
MATR3-222	ENST00000513678	ARHGEF37	A1IGU5	675 aa		18.31	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms