RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 TBX20Q9UMR3 447 aa7.97□□□□□ -1.13
HTT-212ENST00000513639 SRPRBQ9Y5M8 271 aaKnown RBP7.97□□□□□ -1.13
HTT-212ENST00000513639 CLUHO75153 1309 aa7.97□□□□□ -1.13
HTT-212ENST00000513639 VPS37CA5D8V6 355 aaPredicted RBP7.96□□□□□ -1.14
HTT-212ENST00000513639 PODXLO00592 558 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 HNRNPDLO14979 420 aaKnown RBP7.96□□□□□ -1.14
HTT-212ENST00000513639 TRAK2O60296 914 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 TBCAO75347 108 aaKnown RBP7.96□□□□□ -1.14
HTT-212ENST00000513639 C8AP07357 584 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 MYBP10242 640 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 PTPN2P17706 415 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 CYP3A5P20815 502 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 LIG4P49917 911 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 ZNF131P52739 623 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 NCKAP1LP55160 1127 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 POU5F1Q01860 360 aaKnown RBP7.96□□□□□ -1.14
HTT-212ENST00000513639 DHX8Q14562 1220 aaKnown RBP7.96□□□□□ -1.14
HTT-212ENST00000513639 SLC10A6Q3KNW5 377 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 GLRA4Q5JXX5 417 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 IER5LQ5T953 404 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 TPGS2Q68CL5 300 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 SLFN12LQ6IEE8 588 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 SLC8B1Q6J4K2 584 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 SV2BQ7L1I2 683 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 RAD54LQ92698 747 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 ZBTB45Q96K62 511 aaPredicted RBP7.96□□□□□ -1.14
HTT-212ENST00000513639 SNX27Q96L92 541 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 ZMAT2Q96NC0 199 aaKnown RBP7.96□□□□□ -1.14
HTT-212ENST00000513639 RTP3Q9BQQ7 232 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 BACH2Q9BYV9 841 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 CXCL16Q9H2A7 254 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 ZHX3Q9H4I2 956 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 ANKFY1Q9P2R3 1169 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 CACNG4Q9UBN1 327 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 FBXW11Q9UKB1 542 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 CDH7Q9ULB5 785 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 DUSP12Q9UNI6 340 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 CDY1Q9Y6F8 540 aa7.96□□□□□ -1.14
HTT-212ENST00000513639 ATG2AQ2TAZ0 1938 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 ZNF318Q5VUA4 2279 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 A0A0B4J269 797 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 NPHP3-ACAD11A0A0J9YXS1 232 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 ARHGEF37A1IGU5 675 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 ANHXE9PGG2 379 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 ABLIM1O14639 778 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 PRRG1O14668 218 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 ZNF197O14709 1029 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 OGTO15294 1046 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 GALR2O43603 387 aaPredicted RBP7.95□□□□□ -1.14
HTT-212ENST00000513639 ABLIM3O94929 683 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 PIGRP01833 764 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 SRFP11831 508 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 HARSP12081 509 aaKnown RBP7.95□□□□□ -1.14
HTT-212ENST00000513639 ATF2P15336 505 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 PLCG1P19174 1290 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 SYT1P21579 422 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 RFX1P22670 979 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 TKTP29401 623 aaKnown RBP7.95□□□□□ -1.14
HTT-212ENST00000513639 GTF2BQ00403 316 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 PPP2R3AQ06190 1150 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 SOX4Q06945 474 aaPredicted RBP7.95□□□□□ -1.14
HTT-212ENST00000513639 MRPL58Q14197 206 aaKnown RBP7.95□□□□□ -1.14
HTT-212ENST00000513639 MCM6Q14566 821 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 KARSQ15046 597 aaKnown RBP7.95□□□□□ -1.14
HTT-212ENST00000513639 POSTNQ15063 836 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 VARS2Q5ST30 1063 aaKnown RBP7.95□□□□□ -1.14
HTT-212ENST00000513639 RRAGBQ5VZM2 374 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 CD300LGQ6UXG3 332 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 CCDC73Q6ZRK6 1079 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 MTSS1LQ765P7 747 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 GRASPQ7Z6J2 395 aaPredicted RBP7.95□□□□□ -1.14
HTT-212ENST00000513639 USP37Q86T82 979 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 ALYREFQ86V81 257 aaKnown RBP7.95□□□□□ -1.14
HTT-212ENST00000513639 TCEAL8Q8IYN2 117 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 ELMOD1Q8N336 334 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 CEP120Q8N960 986 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 SLC7A14Q8TBB6 771 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 LARP4BQ92615 738 aaKnown RBP7.95□□□□□ -1.14
HTT-212ENST00000513639 ATOH1Q92858 354 aaPredicted RBP7.95□□□□□ -1.14
HTT-212ENST00000513639 C18orf25Q96B23 403 aaPredicted RBP7.95□□□□□ -1.14
HTT-212ENST00000513639 SHDQ96IW2 340 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 SUSD3Q96L08 255 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 MYADMQ96S97 322 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 REEP2Q9BRK0 252 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 MSTO1Q9BUK6 570 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 LRRC27Q9C0I9 530 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 ST6GALNAC4Q9H4F1 302 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 RPF1Q9H9Y2 349 aaKnown RBP7.95□□□□□ -1.14
HTT-212ENST00000513639 BLOC1S4Q9NUP1 217 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 GDE1Q9NZC3 331 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 SEL1LQ9UBV2 794 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 STK17AQ9UEE5 414 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 UBQLN1Q9UMX0 589 aaKnown RBP7.95□□□□□ -1.14
HTT-212ENST00000513639 POLIQ9UNA4 740 aa7.95□□□□□ -1.14
HTT-212ENST00000513639 TTC26A0AVF1 554 aa7.94□□□□□ -1.14
HTT-212ENST00000513639 LACTBL1A8MY62 500 aa7.94□□□□□ -1.14
HTT-212ENST00000513639 K7ENM7 598 aa7.94□□□□□ -1.14
HTT-212ENST00000513639 CCL16O15467 120 aa7.94□□□□□ -1.14
HTT-212ENST00000513639 ADAM12O43184 909 aa7.94□□□□□ -1.14
HTT-212ENST00000513639 TBC1D4O60343 1298 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms