RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 IGSF5Q9NSI5 407 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 ARHGAP20Q9P2F6 1191 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 LRRFIP2Q9Y608 721 aaKnown RBP4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 CDH23Q9H251 3354 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 PTPRFP10586 1907 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 PLXNB2O15031 1838 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 LTBP2Q14767 1821 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 MATN2O00339 956 aa4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 KRIT1O00522 736 aa4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 CPP00450 1065 aa4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 ENO2P09104 434 aaPredicted RBP4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 FAHP16930 419 aa4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 ZKSCAN1P17029 563 aaPredicted RBP4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 LTBRP36941 435 aa4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 SOX9P48436 509 aa4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 TOP3AQ13472 1001 aaPredicted RBP4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 MFSD14CQ5VZR4 134 aa4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 KIAA1211LQ6NV74 962 aa4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 CCDC174Q6PII3 467 aa4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 METTL16Q86W50 562 aaKnown RBP4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 NT5DC4Q86YG4 428 aa4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 STPG3Q8N7X2 389 aa4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 GPRC5AQ8NFJ5 357 aa4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 LINS1Q8NG48 757 aa4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 WDR66Q8TBY9 1149 aa4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 HERVK_113Q902F9 699 aa4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 TIFAQ96CG3 184 aa4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 EDC3Q96F86 508 aaKnown RBP4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 RNPC3Q96LT9 517 aaKnown RBP4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 IDI2Q9BXS1 227 aa4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 CDIP1Q9H305 208 aa4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 EPHX3Q9H6B9 360 aa4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 SLC2A4RGQ9NR83 387 aa4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 IFT57Q9NWB7 429 aa4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 PARPBPQ9NWS1 579 aa4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 DDX20Q9UHI6 824 aaKnown RBP4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 MYO9BQ13459 2157 aa4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 MAST2Q6P0Q8 1798 aa4.55□□□□□ -1.68
PDLIM5-218ENST00000513341 RLFQ13129 1914 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 UTYO14607 1347 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 MROH5Q6ZUA9 1318 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 KIF16BQ96L93 1317 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 PHIPQ8WWQ0 1821 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 TRIM75PA6NK02 468 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 C19orf81C9J6K1 198 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 PI4K2BG5E9Z4 385 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 SMIM22K7EJ46 135 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 ELL2O00472 640 aaPredicted RBP4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 KIAA0355O15063 1070 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 ERC2O15083 957 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 PLIN1O60240 522 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 CDC14BO60729 498 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 HOXC6P09630 235 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 POU3F3P20264 500 aaPredicted RBP4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 BMP5P22003 454 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 ERCC5P28715 1186 aaPredicted RBP4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 CCND3P30281 292 aaPredicted RBP4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 MRE11P49959 708 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 TAF7LQ5H9L4 462 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 TREML2Q5T2D2 321 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 CDC42EP5Q6NZY7 148 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 ADGRE4PQ86SQ3 457 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 CCAR1Q8IX12 1150 aaKnown RBP4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 MICAL1Q8TDZ2 1067 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 PPM1EQ8WY54 764 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 RUNDC1Q96C34 613 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 OR14A2Q96R54 314 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 DPYSL5Q9BPU6 564 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 TTPALQ9BTX7 342 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 STK31Q9BXU1 1019 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 OSBPL5Q9H0X9 879 aaPredicted RBP4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 NELFAQ9H3P2 528 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 AS3MTQ9HBK9 375 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 TLR9Q9NR96 1032 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 CLDND1Q9NY35 253 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 DDX41Q9UJV9 622 aaKnown RBP4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 COG5Q9UP83 839 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 ATP11BQ9Y2G3 1177 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 A0A1B0GUL6 1792 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 TCF20Q9UGU0 1960 aaKnown RBP4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 DNAH12Q6ZR08 3092 aa4.54□□□□□ -1.68
PDLIM5-218ENST00000513341 ATRNL1Q5VV63 1379 aa4.53□□□□□ -1.68
PDLIM5-218ENST00000513341 CACNA1FO60840 1977 aa4.53□□□□□ -1.68
PDLIM5-218ENST00000513341 PMS2P1A4D2B8 440 aa4.53□□□□□ -1.68
PDLIM5-218ENST00000513341 TRIM43BA6NCK2 446 aa4.53□□□□□ -1.68
PDLIM5-218ENST00000513341 SLC15A5A6NIM6 579 aa4.53□□□□□ -1.68
PDLIM5-218ENST00000513341 ZNF839A8K0R7 811 aa4.53□□□□□ -1.68
PDLIM5-218ENST00000513341 KBTBD13C9JR72 458 aa4.53□□□□□ -1.68
PDLIM5-218ENST00000513341 PDE8BO95263 885 aa4.53□□□□□ -1.68
PDLIM5-218ENST00000513341 MAP4K4O95819 1239 aaPredicted RBP4.53□□□□□ -1.68
PDLIM5-218ENST00000513341 IL18BPO95998 194 aa4.53□□□□□ -1.68
PDLIM5-218ENST00000513341 CCNA1P78396 465 aa4.53□□□□□ -1.68
PDLIM5-218ENST00000513341 TLE2Q04725 743 aa4.53□□□□□ -1.68
PDLIM5-218ENST00000513341 FPGSQ05932 587 aa4.53□□□□□ -1.68
PDLIM5-218ENST00000513341 TCP10Q12799 353 aa4.53□□□□□ -1.68
PDLIM5-218ENST00000513341 FOXL1Q12952 345 aa4.53□□□□□ -1.68
PDLIM5-218ENST00000513341 SPP2Q13103 211 aa4.53□□□□□ -1.68
PDLIM5-218ENST00000513341 GNL2Q13823 731 aaKnown RBP4.53□□□□□ -1.68
PDLIM5-218ENST00000513341 LMBR1LQ6UX01 489 aa4.53□□□□□ -1.68
PDLIM5-218ENST00000513341 GPR142Q7Z601 462 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms