RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 TPI1P60174 286 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 ZNF200P98182 395 aaPredicted RBP13.12□□□□□ -0.31
COL11A1-210ENST00000512756 C4orf22Q6V702 233 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 PPHLN1Q8NEY8 458 aaKnown RBP13.12□□□□□ -0.31
COL11A1-210ENST00000512756 RNF217Q8TC41 542 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 KCNB2Q92953 911 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 EGFL8Q99944 293 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 PAK5Q9P286 719 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 STX18Q9P2W9 335 aaKnown RBP13.12□□□□□ -0.31
COL11A1-210ENST00000512756 ALG6Q9Y672 507 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 MYO1DO94832 1006 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 COMTP21964 271 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 RFC5P40937 340 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 IRAK1P51617 712 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 C9orf72Q96LT7 481 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 ZIM3Q96PE6 472 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 CARD9Q9H257 536 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 L2HGDHQ9H9P8 463 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 PLAGL2Q9UPG8 496 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 HPS5Q9UPZ3 1129 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 ATP9BO43861 1147 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 ESRRBO95718 433 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 APRTP07741 180 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 SESN2P58004 480 aaPredicted RBP13.12□□□□□ -0.31
COL11A1-210ENST00000512756 NBPF20Q3BBV1 942 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 TTC23LQ6PF05 361 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 OR9Q1Q8NGQ5 310 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 PBXIP1Q96AQ6 731 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 MED15Q96RN5 788 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 SIK2Q9H0K1 926 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 PLEKHA5Q9HAU0 1116 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 RAB6BQ9NRW1 208 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 AGAP1Q9UPQ3 857 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 TRAF3IP3Q9Y228 551 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 NNMTP40261 264 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 ZNF235Q14590 738 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 FASTKD5Q7L8L6 764 aaKnown RBP13.12□□□□□ -0.31
COL11A1-210ENST00000512756 TRPM8Q7Z2W7 1104 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 FBXO33Q7Z6M2 555 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 KCNK16Q96T55 309 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 FRMD8Q9BZ67 464 aaPredicted RBP13.12□□□□□ -0.31
COL11A1-210ENST00000512756 SARS2Q9NP81 518 aaKnown RBP13.12□□□□□ -0.31
COL11A1-210ENST00000512756 PRR12Q9ULL5 1215 aa13.12□□□□□ -0.31
COL11A1-210ENST00000512756 MTO1Q9Y2Z2 717 aaKnown RBP13.12□□□□□ -0.31
COL11A1-210ENST00000512756 PHF20L1A8MW92 1017 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 FAM107AO95990 144 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 LCP1P13796 627 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 CARSP49589 748 aaKnown RBP13.11□□□□□ -0.31
COL11A1-210ENST00000512756 LRRC8EQ6NSJ5 796 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 AFG1LQ8WV93 481 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 PPP1R2P1Q96PQ5 205 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 MMTAG2Q9BU76 263 aaKnown RBP13.11□□□□□ -0.31
COL11A1-210ENST00000512756 TRIM45Q9H8W5 580 aaPredicted RBP13.11□□□□□ -0.31
COL11A1-210ENST00000512756 RSAD1Q9HA92 442 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 XPO7Q9UIA9 1087 aaKnown RBP13.11□□□□□ -0.31
COL11A1-210ENST00000512756 TEKT2Q9UIF3 430 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 TSPOAP1O95153 1857 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 F5H423 210 aaPredicted RBP13.11□□□□□ -0.31
COL11A1-210ENST00000512756 KLHL2O95198 593 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 RALAP11233 206 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 KLRC1P26715 233 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 ACOT2P49753 483 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 RAD51Q06609 339 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 XRRA1Q6P2D8 792 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 DDIASQ8IXT1 998 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 RBM46Q8TBY0 533 aaKnown RBP13.11□□□□□ -0.31
COL11A1-210ENST00000512756 ZNF526Q8TF50 670 aaPredicted RBP13.11□□□□□ -0.31
COL11A1-210ENST00000512756 SEPT1Q8WYJ6 367 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 TSPAN17Q96FV3 270 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 UBA6A0AVT1 1052 aaPredicted RBP13.11□□□□□ -0.31
COL11A1-210ENST00000512756 C19orf81C9J6K1 198 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 CAMTA2O94983 1202 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 MAGEA4P43358 317 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 LAMB3Q13751 1172 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 INPP5AQ14642 412 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 NOA1Q8NC60 698 aaKnown RBP13.11□□□□□ -0.31
COL11A1-210ENST00000512756 SCFD1Q8WVM8 642 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 ARL8AQ96BM9 186 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 CHCHD3Q9NX63 227 aaKnown RBP13.11□□□□□ -0.31
COL11A1-210ENST00000512756 DBR1Q9UK59 544 aaKnown RBP13.11□□□□□ -0.31
COL11A1-210ENST00000512756 GOLGA8RI6L899 631 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 IL18RAPO95256 599 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 MOCS2O96007 188 aaPredicted RBP13.11□□□□□ -0.31
COL11A1-210ENST00000512756 KRT4P19013 534 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 CCND1P24385 295 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 LBRQ14739 615 aaKnown RBP13.11□□□□□ -0.31
COL11A1-210ENST00000512756 RNF135Q8IUD6 432 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 REXO1L1PQ8IX06 675 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 ELMOD1Q8N336 334 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 ASIC4Q96FT7 647 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 SPON2Q9BUD6 331 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 ALG13Q9NP73 1137 aaKnown RBP13.11□□□□□ -0.31
COL11A1-210ENST00000512756 NSMCE4AQ9NXX6 385 aa13.11□□□□□ -0.31
COL11A1-210ENST00000512756 TXNP10599 105 aaKnown RBP13.1□□□□□ -0.31
COL11A1-210ENST00000512756 ALDH18A1P54886 795 aaKnown RBP13.1□□□□□ -0.31
COL11A1-210ENST00000512756 KDSRQ06136 332 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 GFM2Q969S9 779 aaKnown RBP13.1□□□□□ -0.31
COL11A1-210ENST00000512756 MCEEQ96PE7 176 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 SMARCAD1Q9H4L7 1026 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 VCPKMTQ9H867 229 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms