RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 CA4P22748 312 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 RGS7P49802 495 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 PIGHQ14442 188 aaPredicted RBP13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 TERF2Q15554 542 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 ACAD10Q6JQN1 1059 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 RWDD4Q6NW29 188 aaKnown RBP13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 MPZL3Q6UWV2 235 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 PCGF5Q86SE9 256 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 USP38Q8NB14 1042 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 APPL2Q8NEU8 664 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 IL31RAQ8NI17 732 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 RUBCNQ92622 972 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 PACSIN1Q9BY11 444 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 IGKV6D-41A0A0C4DH26 115 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 SPATA31C1P0DKV0 1188 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 ELF1P32519 619 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 KLRG1Q96E93 195 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 MCEEQ96PE7 176 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 MTMR12Q9C0I1 747 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 ITGB3P05106 788 aa13.87□□□□□ -0.19
PCDHA4-202ENST00000512229 INSRRP14616 1297 aa13.87□□□□□ -0.19
PCDHA4-202ENST00000512229 PRLRP16471 622 aa13.87□□□□□ -0.19
PCDHA4-202ENST00000512229 RASSF2P50749 326 aa13.87□□□□□ -0.19
PCDHA4-202ENST00000512229 NPY5RQ15761 445 aa13.87□□□□□ -0.19
PCDHA4-202ENST00000512229 ZKSCAN8Q15776 578 aaPredicted RBP13.87□□□□□ -0.19
PCDHA4-202ENST00000512229 LRRC55Q6ZSA7 311 aa13.87□□□□□ -0.19
PCDHA4-202ENST00000512229 RIOX2Q8IUF8 465 aa13.87□□□□□ -0.19
PCDHA4-202ENST00000512229 RCOR2Q8IZ40 523 aa13.87□□□□□ -0.19
PCDHA4-202ENST00000512229 PURBQ96QR8 312 aaKnown RBP13.87□□□□□ -0.19
PCDHA4-202ENST00000512229 DNAJC18Q9H819 358 aa13.87□□□□□ -0.19
PCDHA4-202ENST00000512229 DONSONQ9NYP3 566 aa13.87□□□□□ -0.19
PCDHA4-202ENST00000512229 FBXL5Q9UKA1 691 aa13.87□□□□□ -0.19
PCDHA4-202ENST00000512229 KDM3BQ7LBC6 1761 aa13.87□□□□□ -0.19
PCDHA4-202ENST00000512229 CYP2C8P10632 490 aa13.87□□□□□ -0.19
PCDHA4-202ENST00000512229 URGCPQ8TCY9 931 aa13.87□□□□□ -0.19
PCDHA4-202ENST00000512229 OSBPL8Q9BZF1 889 aa13.87□□□□□ -0.19
PCDHA4-202ENST00000512229 CPA4Q9UI42 421 aa13.87□□□□□ -0.19
PCDHA4-202ENST00000512229 SCN11AQ9UI33 1791 aa13.87□□□□□ -0.19
PCDHA4-202ENST00000512229 TYW5A2RUC4 315 aaKnown RBP13.87□□□□□ -0.19
PCDHA4-202ENST00000512229 PIK3R2O00459 728 aa13.87□□□□□ -0.19
PCDHA4-202ENST00000512229 RGS2P41220 211 aa13.87□□□□□ -0.19
PCDHA4-202ENST00000512229 LAMTOR4Q0VGL1 99 aa13.87□□□□□ -0.19
PCDHA4-202ENST00000512229 PAPD7Q5XG87 772 aaKnown RBP13.87□□□□□ -0.19
PCDHA4-202ENST00000512229 MMGT1Q8N4V1 131 aa13.87□□□□□ -0.19
PCDHA4-202ENST00000512229 CCDC197Q8NCU1 140 aa13.87□□□□□ -0.19
PCDHA4-202ENST00000512229 CCDC68Q9H2F9 335 aa13.87□□□□□ -0.19
PCDHA4-202ENST00000512229 ATP9AO75110 1047 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 KRT17Q04695 432 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 SREBF2Q12772 1141 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 TMEM132BQ14DG7 1078 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 KIZQ2M2Z5 673 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 CCDC60Q8IWA6 550 aaPredicted RBP13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 PARD3BQ8TEW8 1205 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 STMN2Q93045 179 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 MAGED2Q9UNF1 606 aaPredicted RBP13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 GOLGA8MH3BSY2 632 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 CREB3O43889 395 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 NPTXRO95502 500 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 MMEP08473 750 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 LCP1P13796 627 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 IFT88Q13099 833 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 MYPNQ86TC9 1320 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 FEZF2Q8TBJ5 459 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 ARHGEF2Q92974 986 aaKnown RBP13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 SNF8Q96H20 258 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 RGPD5Q99666 1765 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 CGRRF1Q99675 332 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 KLHL11Q9NVR0 708 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 KLHL8Q9P2G9 620 aaPredicted RBP13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 A0A087WZ62 844 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 BRD2P25440 801 aaKnown RBP13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 ERVK-9P63128 1117 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 PDCLQ13371 301 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 DGKZQ13574 1117 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 MEA1Q16626 185 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 SDCCAG8Q86SQ7 713 aaPredicted RBP13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 SMC1BQ8NDV3 1235 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 RAB3IL1Q8TBN0 382 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 FDXACB1Q9BRP7 624 aaPredicted RBP13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 FAM49BQ9NUQ9 324 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 IPO11Q9UI26 975 aaKnown RBP13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 PLIN4Q96Q06 1357 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 ADCY3O60266 1144 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 PHF2O75151 1096 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 VTNP04004 478 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 HYIQ5T013 277 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 IZUMO3Q5VZ72 239 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 ZC3H18Q86VM9 953 aaKnown RBP13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 MTMR14Q8NCE2 650 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 ABHD16BQ9H3Z7 469 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 EHD2Q9NZN4 543 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 KCNH4Q9UQ05 1017 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 SIK3Q9Y2K2 1263 aa13.86□□□□□ -0.19
PCDHA4-202ENST00000512229 SPDYE16A6NNV3 312 aaPredicted RBP13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 RAD51CO43502 376 aa13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 CSDE1O75534 798 aaKnown RBP13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 PSMC4P43686 418 aa13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 EFHC2Q5JST6 749 aa13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 MAP4K3Q8IVH8 894 aa13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 ARHGAP24Q8N264 748 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms