RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 DDX27Q96GQ7 796 aaKnown RBP14.48□□□□□ -0.09
RNF4-215ENST00000511843 RIPOR3Q96MK2 946 aa14.48□□□□□ -0.09
RNF4-215ENST00000511843 LRFN3Q9BTN0 628 aa14.48□□□□□ -0.09
RNF4-215ENST00000511843 C1QTNF1Q9BXJ1 281 aa14.48□□□□□ -0.09
RNF4-215ENST00000511843 ST6GALNAC4Q9H4F1 302 aa14.48□□□□□ -0.09
RNF4-215ENST00000511843 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.48□□□□□ -0.09
RNF4-215ENST00000511843 FNIP2Q9P278 1114 aa14.48□□□□□ -0.09
RNF4-215ENST00000511843 TECTAO75443 2155 aa14.47□□□□□ -0.09
RNF4-215ENST00000511843 GCNT3O95395 438 aa14.47□□□□□ -0.09
RNF4-215ENST00000511843 GAP43P17677 238 aa14.47□□□□□ -0.09
RNF4-215ENST00000511843 OR1D2P34982 312 aa14.47□□□□□ -0.09
RNF4-215ENST00000511843 PPP2R3AQ06190 1150 aa14.47□□□□□ -0.09
RNF4-215ENST00000511843 ELAVL2Q12926 359 aaKnown RBP14.47□□□□□ -0.09
RNF4-215ENST00000511843 TMEM31Q5JXX7 168 aa14.47□□□□□ -0.09
RNF4-215ENST00000511843 ATAT1Q5SQI0 421 aa14.47□□□□□ -0.09
RNF4-215ENST00000511843 ADALQ6DHV7 355 aa14.47□□□□□ -0.09
RNF4-215ENST00000511843 JADE1Q6IE81 842 aa14.47□□□□□ -0.09
RNF4-215ENST00000511843 ZSWIM2Q8NEG5 633 aa14.47□□□□□ -0.09
RNF4-215ENST00000511843 KCNG4Q8TDN1 519 aa14.47□□□□□ -0.09
RNF4-215ENST00000511843 NECTIN4Q96NY8 510 aa14.47□□□□□ -0.09
RNF4-215ENST00000511843 STRA6Q9BX79 667 aa14.47□□□□□ -0.09
RNF4-215ENST00000511843 RPF1Q9H9Y2 349 aaKnown RBP14.47□□□□□ -0.09
RNF4-215ENST00000511843 CPSF3Q9UKF6 684 aaKnown RBP14.47□□□□□ -0.09
RNF4-215ENST00000511843 NUB1Q9Y5A7 615 aa14.47□□□□□ -0.09
RNF4-215ENST00000511843 NOTCH4Q99466 2003 aa14.47□□□□□ -0.09
RNF4-215ENST00000511843 FRMD3A2A2Y4 597 aa14.46□□□□□ -0.09
RNF4-215ENST00000511843 TULP1O00294 542 aaPredicted RBP14.46□□□□□ -0.09
RNF4-215ENST00000511843 PPEF2O14830 753 aa14.46□□□□□ -0.09
RNF4-215ENST00000511843 POLR2DO15514 142 aaKnown RBP14.46□□□□□ -0.09
RNF4-215ENST00000511843 NFICP08651 508 aa14.46□□□□□ -0.09
RNF4-215ENST00000511843 ALADP13716 330 aa14.46□□□□□ -0.09
RNF4-215ENST00000511843 ADSSP30520 456 aa14.46□□□□□ -0.09
RNF4-215ENST00000511843 MCM4P33991 863 aa14.46□□□□□ -0.09
RNF4-215ENST00000511843 CREMQ03060 361 aa14.46□□□□□ -0.09
RNF4-215ENST00000511843 L1TD1Q5T7N2 865 aaKnown RBP14.46□□□□□ -0.09
RNF4-215ENST00000511843 GRAMD1CQ8IYS0 662 aa14.46□□□□□ -0.09
RNF4-215ENST00000511843 KREMEN2Q8NCW0 462 aa14.46□□□□□ -0.09
RNF4-215ENST00000511843 POMGNT1Q8WZA1 660 aa14.46□□□□□ -0.09
RNF4-215ENST00000511843 SMG7Q92540 1137 aaKnown RBP14.46□□□□□ -0.09
RNF4-215ENST00000511843 ZNF707Q96C28 371 aaPredicted RBP14.46□□□□□ -0.09
RNF4-215ENST00000511843 TRIM9Q9C026 710 aa14.46□□□□□ -0.09
RNF4-215ENST00000511843 PLEKHA5Q9HAU0 1116 aa14.46□□□□□ -0.09
RNF4-215ENST00000511843 KBTBD4Q9NVX7 518 aa14.46□□□□□ -0.09
RNF4-215ENST00000511843 MTRRQ9UBK8 725 aa14.46□□□□□ -0.09
RNF4-215ENST00000511843 SEL1LQ9UBV2 794 aa14.46□□□□□ -0.09
RNF4-215ENST00000511843 CDY1Q9Y6F8 540 aa14.46□□□□□ -0.09
RNF4-215ENST00000511843 TRAPPC3O43617 180 aa14.45□□□□□ -0.1
RNF4-215ENST00000511843 PRPF6O94906 941 aaKnown RBP14.45□□□□□ -0.1
RNF4-215ENST00000511843 ASGR2P07307 311 aa14.45□□□□□ -0.1
RNF4-215ENST00000511843 PDIA4P13667 645 aaKnown RBP14.45□□□□□ -0.1
RNF4-215ENST00000511843 COL9A1P20849 921 aa14.45□□□□□ -0.1
RNF4-215ENST00000511843 SCP2P22307 547 aa14.45□□□□□ -0.1
RNF4-215ENST00000511843 RPL9P32969 192 aaKnown RBP14.45□□□□□ -0.1
RNF4-215ENST00000511843 ASIC1P78348 528 aa14.45□□□□□ -0.1
RNF4-215ENST00000511843 ZBTB6Q15916 424 aa14.45□□□□□ -0.1
RNF4-215ENST00000511843 VARS2Q5ST30 1063 aaKnown RBP14.45□□□□□ -0.1
RNF4-215ENST00000511843 RESP18Q5W5W9 173 aa14.45□□□□□ -0.1
RNF4-215ENST00000511843 CRELD2Q6UXH1 353 aaPredicted RBP14.45□□□□□ -0.1
RNF4-215ENST00000511843 CCDC65Q8IXS2 484 aa14.45□□□□□ -0.1
RNF4-215ENST00000511843 GPR65Q8IYL9 337 aa14.45□□□□□ -0.1
RNF4-215ENST00000511843 TDRD5Q8NAT2 981 aaKnown RBP14.45□□□□□ -0.1
RNF4-215ENST00000511843 HVCN1Q96D96 273 aa14.45□□□□□ -0.1
RNF4-215ENST00000511843 SAAL1Q96ER3 474 aa14.45□□□□□ -0.1
RNF4-215ENST00000511843 ACCSQ96QU6 501 aa14.45□□□□□ -0.1
RNF4-215ENST00000511843 BLZF1Q9H2G9 400 aa14.45□□□□□ -0.1
RNF4-215ENST00000511843 TNMDQ9H2S6 317 aa14.45□□□□□ -0.1
RNF4-215ENST00000511843 SMOC2Q9H3U7 446 aa14.45□□□□□ -0.1
RNF4-215ENST00000511843 OLFML3Q9NRN5 406 aa14.45□□□□□ -0.1
RNF4-215ENST00000511843 FBXW11Q9UKB1 542 aa14.45□□□□□ -0.1
RNF4-215ENST00000511843 RCOR1Q9UKL0 485 aa14.45□□□□□ -0.1
RNF4-215ENST00000511843 AGO2Q9UKV8 859 aaKnown RBP14.45□□□□□ -0.1
RNF4-215ENST00000511843 CFAP45Q9UL16 551 aa14.45□□□□□ -0.1
RNF4-215ENST00000511843 NR2E1Q9Y466 385 aa14.45□□□□□ -0.1
RNF4-215ENST00000511843 STYXL1Q9Y6J8 313 aa14.45□□□□□ -0.1
RNF4-215ENST00000511843 GOLGA8IPA6NC78 632 aa14.44□□□□□ -0.1
RNF4-215ENST00000511843 GOLGA8JA6NMD2 632 aa14.44□□□□□ -0.1
RNF4-215ENST00000511843 GPR37L1O60883 481 aa14.44□□□□□ -0.1
RNF4-215ENST00000511843 N4BP1O75113 896 aaKnown RBP14.44□□□□□ -0.1
RNF4-215ENST00000511843 ZMYND10O75800 440 aa14.44□□□□□ -0.1
RNF4-215ENST00000511843 AFMP43652 599 aa14.44□□□□□ -0.1
RNF4-215ENST00000511843 ARPP19P56211 112 aa14.44□□□□□ -0.1
RNF4-215ENST00000511843 WNT7BP56706 349 aa14.44□□□□□ -0.1
RNF4-215ENST00000511843 NTHL1P78549 312 aa14.44□□□□□ -0.1
RNF4-215ENST00000511843 KYAT1Q16773 422 aa14.44□□□□□ -0.1
RNF4-215ENST00000511843 ATL3Q6DD88 541 aa14.44□□□□□ -0.1
RNF4-215ENST00000511843 C15orf39Q6ZRI6 1047 aa14.44□□□□□ -0.1
RNF4-215ENST00000511843 CCDC149Q6ZUS6 474 aa14.44□□□□□ -0.1
RNF4-215ENST00000511843 SYCP3Q8IZU3 236 aa14.44□□□□□ -0.1
RNF4-215ENST00000511843 IQUBQ8NA54 791 aa14.44□□□□□ -0.1
RNF4-215ENST00000511843 CMASQ8NFW8 434 aaPredicted RBP14.44□□□□□ -0.1
RNF4-215ENST00000511843 NOC3LQ8WTT2 800 aaKnown RBP14.44□□□□□ -0.1
RNF4-215ENST00000511843 FAM84AQ96KN4 292 aa14.44□□□□□ -0.1
RNF4-215ENST00000511843 SUSD3Q96L08 255 aa14.44□□□□□ -0.1
RNF4-215ENST00000511843 FAM213AQ9BRX8 229 aa14.44□□□□□ -0.1
RNF4-215ENST00000511843 PLEKHA4Q9H4M7 779 aa14.44□□□□□ -0.1
RNF4-215ENST00000511843 PIDD1Q9HB75 910 aa14.44□□□□□ -0.1
RNF4-215ENST00000511843 UBQLN1Q9UMX0 589 aaKnown RBP14.44□□□□□ -0.1
RNF4-215ENST00000511843 TIMM13Q9Y5L4 95 aaPredicted RBP14.44□□□□□ -0.1
RNF4-215ENST00000511843 CCL16O15467 120 aa14.43□□□□□ -0.1
RNF4-215ENST00000511843 C8AP07357 584 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms