RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 RAB33AQ14088 237 aa25.05■■□□□ 1.6
SNF8-209ENST00000510558 KYAT1Q16773 422 aa25.05■■□□□ 1.6
SNF8-209ENST00000510558 DYMQ7RTS9 669 aa25.05■■□□□ 1.6
SNF8-209ENST00000510558 SMOC2Q9H3U7 446 aa25.05■■□□□ 1.6
SNF8-209ENST00000510558 NUB1Q9Y5A7 615 aa25.05■■□□□ 1.6
SNF8-209ENST00000510558 BACE2Q9Y5Z0 518 aa25.05■■□□□ 1.6
SNF8-209ENST00000510558 TTC26A0AVF1 554 aa25.04■■□□□ 1.6
SNF8-209ENST00000510558 C8AP07357 584 aa25.04■■□□□ 1.6
SNF8-209ENST00000510558 GBP2P32456 591 aaPredicted RBP25.04■■□□□ 1.6
SNF8-209ENST00000510558 NASPP49321 788 aaPredicted RBP25.04■■□□□ 1.6
SNF8-209ENST00000510558 RSPO2Q6UXX9 243 aaPredicted RBP25.04■■□□□ 1.6
SNF8-209ENST00000510558 MAP4K3Q8IVH8 894 aa25.04■■□□□ 1.6
SNF8-209ENST00000510558 HSCBQ8IWL3 235 aa25.04■■□□□ 1.6
SNF8-209ENST00000510558 SUGP1Q8IWZ8 645 aaKnown RBP25.04■■□□□ 1.6
SNF8-209ENST00000510558 FBXL6Q8N531 539 aa25.04■■□□□ 1.6
SNF8-209ENST00000510558 TUBGCP4Q9UGJ1 667 aa25.04■■□□□ 1.6
SNF8-209ENST00000510558 CDY1Q9Y6F8 540 aa25.04■■□□□ 1.6
SNF8-209ENST00000510558 MUC6Q6W4X9 2439 aa25.04■■□□□ 1.6
SNF8-209ENST00000510558 ZDBF2Q9HCK1 2354 aa25.03■■□□□ 1.6
SNF8-209ENST00000510558 OGTO15294 1046 aa25.03■■□□□ 1.6
SNF8-209ENST00000510558 FAM189A1O60320 539 aa25.03■■□□□ 1.6
SNF8-209ENST00000510558 HNRNPA1P09651 372 aaKnown RBP eCLIP25.03■■□□□ 1.6
SNF8-209ENST00000510558 PPP2R3AQ06190 1150 aa25.03■■□□□ 1.6
SNF8-209ENST00000510558 SPAG1Q07617 926 aa25.03■■□□□ 1.6
SNF8-209ENST00000510558 ZC2HC1CQ53FD0 456 aaPredicted RBP25.03■■□□□ 1.6
SNF8-209ENST00000510558 PPM1LQ5SGD2 360 aa25.03■■□□□ 1.6
SNF8-209ENST00000510558 ZBTB41Q5SVQ8 909 aa25.03■■□□□ 1.6
SNF8-209ENST00000510558 SLC39A4Q6P5W5 647 aa25.03■■□□□ 1.6
SNF8-209ENST00000510558 SFR1Q86XK3 245 aa25.03■■□□□ 1.6
SNF8-209ENST00000510558 DDX12PQ92771 950 aa25.03■■□□□ 1.6
SNF8-209ENST00000510558 KIF12Q96FN5 646 aa25.03■■□□□ 1.6
SNF8-209ENST00000510558 ST6GALNAC4Q9H4F1 302 aa25.03■■□□□ 1.6
SNF8-209ENST00000510558 A0A0B4J269 797 aa25.02■■□□□ 1.6
SNF8-209ENST00000510558 MYMKA6NI61 221 aa25.02■■□□□ 1.6
SNF8-209ENST00000510558 SYN3O14994 580 aa25.02■■□□□ 1.6
SNF8-209ENST00000510558 HOXA9P31269 272 aa25.02■■□□□ 1.6
SNF8-209ENST00000510558 STK38Q15208 465 aa25.02■■□□□ 1.6
SNF8-209ENST00000510558 VARS2Q5ST30 1063 aaKnown RBP25.02■■□□□ 1.6
SNF8-209ENST00000510558 CCDC73Q6ZRK6 1079 aa25.02■■□□□ 1.6
SNF8-209ENST00000510558 SV2BQ7L1I2 683 aa25.02■■□□□ 1.6
SNF8-209ENST00000510558 MYADMQ96S97 322 aa25.02■■□□□ 1.6
SNF8-209ENST00000510558 MSTO1Q9BUK6 570 aa25.02■■□□□ 1.6
SNF8-209ENST00000510558 KCNH6Q9H252 994 aa25.02■■□□□ 1.6
SNF8-209ENST00000510558 RPF1Q9H9Y2 349 aaKnown RBP25.02■■□□□ 1.6
SNF8-209ENST00000510558 ANK1P16157 1881 aa25.02■■□□□ 1.6
SNF8-209ENST00000510558 LACTBL1A8MY62 500 aa25.01■■□□□ 1.59
SNF8-209ENST00000510558 MCM4P33991 863 aa25.01■■□□□ 1.59
SNF8-209ENST00000510558 STAT6P42226 847 aa25.01■■□□□ 1.59
SNF8-209ENST00000510558 ENOX2Q16206 610 aaKnown RBP25.01■■□□□ 1.59
SNF8-209ENST00000510558 AXDND1Q5T1B0 1012 aaPredicted RBP25.01■■□□□ 1.59
SNF8-209ENST00000510558 TMEM130Q8N3G9 435 aa25.01■■□□□ 1.59
SNF8-209ENST00000510558 LINC00301Q8NCQ3 95 aa25.01■■□□□ 1.59
SNF8-209ENST00000510558 SLC7A14Q8TBB6 771 aa25.01■■□□□ 1.59
SNF8-209ENST00000510558 SUSD3Q96L08 255 aa25.01■■□□□ 1.59
SNF8-209ENST00000510558 KCNK12Q9HB15 430 aa25.01■■□□□ 1.59
SNF8-209ENST00000510558 UBQLN1Q9UMX0 589 aaKnown RBP25.01■■□□□ 1.59
SNF8-209ENST00000510558 A0A087X0B3 334 aa25■■□□□ 1.59
SNF8-209ENST00000510558 ANKRD63C9JTQ0 380 aa25■■□□□ 1.59
SNF8-209ENST00000510558 ZBTB6Q15916 424 aa25■■□□□ 1.59
SNF8-209ENST00000510558 SLC8B1Q6J4K2 584 aa25■■□□□ 1.59
SNF8-209ENST00000510558 GET4Q7L5D6 327 aaPredicted RBP25■■□□□ 1.59
SNF8-209ENST00000510558 ZNF720Q7Z2F6 126 aa25■■□□□ 1.59
SNF8-209ENST00000510558 DNAJC19Q96DA6 116 aa25■■□□□ 1.59
SNF8-209ENST00000510558 ZNF396Q96N95 335 aaPredicted RBP25■■□□□ 1.59
SNF8-209ENST00000510558 PANK2Q9BZ23 570 aa25■■□□□ 1.59
SNF8-209ENST00000510558 IGSF9Q9P2J2 1179 aa25■■□□□ 1.59
SNF8-209ENST00000510558 EPS15L1Q9UBC2 864 aa25■■□□□ 1.59
SNF8-209ENST00000510558 SEL1LQ9UBV2 794 aa25■■□□□ 1.59
SNF8-209ENST00000510558 GTF3C5Q9Y5Q8 519 aaPredicted RBP25■■□□□ 1.59
SNF8-209ENST00000510558 CCL16O15467 120 aa24.99■■□□□ 1.59
SNF8-209ENST00000510558 XYLBO75191 536 aa24.99■■□□□ 1.59
SNF8-209ENST00000510558 PDGFBP01127 241 aaPredicted RBP24.99■■□□□ 1.59
SNF8-209ENST00000510558 ADRB2P07550 413 aa24.99■■□□□ 1.59
SNF8-209ENST00000510558 HSP90AA1P07900 732 aaKnown RBP24.99■■□□□ 1.59
SNF8-209ENST00000510558 CYP3A5P20815 502 aa24.99■■□□□ 1.59
SNF8-209ENST00000510558 LRPAP1P30533 357 aa24.99■■□□□ 1.59
SNF8-209ENST00000510558 ROR1Q01973 937 aa24.99■■□□□ 1.59
SNF8-209ENST00000510558 TDGQ13569 410 aa24.99■■□□□ 1.59
SNF8-209ENST00000510558 UVSSAQ2YD98 709 aa24.99■■□□□ 1.59
SNF8-209ENST00000510558 GRASPQ7Z6J2 395 aaPredicted RBP24.99■■□□□ 1.59
SNF8-209ENST00000510558 HVCN1Q96D96 273 aa24.99■■□□□ 1.59
SNF8-209ENST00000510558 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.99■■□□□ 1.59
SNF8-209ENST00000510558 TFIP11Q9UBB9 837 aaKnown RBP24.99■■□□□ 1.59
SNF8-209ENST00000510558 CPSF3Q9UKF6 684 aaKnown RBP24.99■■□□□ 1.59
SNF8-209ENST00000510558 TISP43B9A030 160 aa24.98■■□□□ 1.59
SNF8-209ENST00000510558 H7C4K7 107 aa24.98■■□□□ 1.59
SNF8-209ENST00000510558 SPTLC2O15270 562 aa24.98■■□□□ 1.59
SNF8-209ENST00000510558 XPOTO43592 962 aaKnown RBP24.98■■□□□ 1.59
SNF8-209ENST00000510558 TBC1D4O60343 1298 aa24.98■■□□□ 1.59
SNF8-209ENST00000510558 PPP1R37O75864 691 aa24.98■■□□□ 1.59
SNF8-209ENST00000510558 GAP43P17677 238 aa24.98■■□□□ 1.59
SNF8-209ENST00000510558 FSHRP23945 695 aa24.98■■□□□ 1.59
SNF8-209ENST00000510558 MRPL58Q14197 206 aaKnown RBP24.98■■□□□ 1.59
SNF8-209ENST00000510558 FOXD4L5Q5VV16 416 aaPredicted RBP24.98■■□□□ 1.59
SNF8-209ENST00000510558 PDILTQ8N807 584 aa24.98■■□□□ 1.59
SNF8-209ENST00000510558 FOXD4L4Q8WXT5 416 aaPredicted RBP24.98■■□□□ 1.59
SNF8-209ENST00000510558 FAM212AQ96EL1 285 aa24.98■■□□□ 1.59
SNF8-209ENST00000510558 TSPAN18Q96SJ8 248 aa24.98■■□□□ 1.59
SNF8-209ENST00000510558 MRPL44Q9H9J2 332 aaKnown RBP24.98■■□□□ 1.59
SNF8-209ENST00000510558 POLIQ9UNA4 740 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms