RNA–Protein interactions for RNA: ENST00000510245.1

CAST-231, Transcript of calpastatin, human

TSL 4

Gene CAST, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-231	ENST00000510245	TDRD5	Q8NAT2	981 aa	Known RBP	8.86	□□□□□ -0.99
CAST-231	ENST00000510245	LRRN4CL	Q8ND94	238 aa		8.86	□□□□□ -0.99
CAST-231	ENST00000510245	SEPT8	Q92599	483 aa		8.86	□□□□□ -0.99
CAST-231	ENST00000510245	CTAGE1	Q96RT6	745 aa		8.86	□□□□□ -0.99
CAST-231	ENST00000510245	EPN3	Q9H201	632 aa		8.86	□□□□□ -0.99
CAST-231	ENST00000510245	RC3H2	Q9HBD1	1191 aa	Known RBP	8.86	□□□□□ -0.99
CAST-231	ENST00000510245	RAVER2	Q9HCJ3	691 aa	Known RBP	8.86	□□□□□ -0.99
CAST-231	ENST00000510245	ARHGEF4	Q9NR80	690 aa		8.86	□□□□□ -0.99
CAST-231	ENST00000510245	GFOD1	Q9NXC2	390 aa		8.86	□□□□□ -0.99
CAST-231	ENST00000510245	GMEB2	Q9UKD1	530 aa		8.86	□□□□□ -0.99
CAST-231	ENST00000510245	KCNH3	Q9ULD8	1083 aa		8.86	□□□□□ -0.99
CAST-231	ENST00000510245	PCDHB12	Q9Y5F1	795 aa		8.86	□□□□□ -0.99
CAST-231	ENST00000510245	DDX49	Q9Y6V7	483 aa	Known RBP	8.86	□□□□□ -0.99
CAST-231	ENST00000510245	NAV2	Q8IVL1	2488 aa		8.86	□□□□□ -0.99
CAST-231	ENST00000510245	TMEM8B	A6NDV4	472 aa		8.85	□□□□□ -0.99
CAST-231	ENST00000510245	EIF4E1B	A6NMX2	242 aa	Known RBP	8.85	□□□□□ -0.99
CAST-231	ENST00000510245	SRRM3	A6NNA2	597 aa	Predicted RBP	8.85	□□□□□ -0.99
CAST-231	ENST00000510245	APAF1	O14727	1248 aa		8.85	□□□□□ -0.99
CAST-231	ENST00000510245	ATP2A1	O14983	1001 aa		8.85	□□□□□ -0.99
CAST-231	ENST00000510245	PER2	O15055	1255 aa		8.85	□□□□□ -0.99
CAST-231	ENST00000510245	CDC45	O75419	566 aa		8.85	□□□□□ -0.99
CAST-231	ENST00000510245	RNASE1	P07998	156 aa	Known RBP	8.85	□□□□□ -0.99
CAST-231	ENST00000510245	LINC00271	P0C7V0	271 aa		8.85	□□□□□ -0.99
CAST-231	ENST00000510245	DNAJB1	P25685	340 aa		8.85	□□□□□ -0.99
CAST-231	ENST00000510245	TEC	P42680	631 aa		8.85	□□□□□ -0.99
CAST-231	ENST00000510245	PLCD1	P51178	756 aa		8.85	□□□□□ -0.99
CAST-231	ENST00000510245	ZNF445	P59923	1031 aa		8.85	□□□□□ -0.99
CAST-231	ENST00000510245	CBLL1	Q75N03	491 aa		8.85	□□□□□ -0.99
CAST-231	ENST00000510245	C1orf210	Q8IVY1	113 aa		8.85	□□□□□ -0.99
CAST-231	ENST00000510245	ATP8B4	Q8TF62	1192 aa		8.85	□□□□□ -0.99
CAST-231	ENST00000510245	ZNF669	Q96BR6	464 aa	Predicted RBP	8.85	□□□□□ -0.99
CAST-231	ENST00000510245	BORCS6	Q96GS4	357 aa		8.85	□□□□□ -0.99
CAST-231	ENST00000510245	WDR11	Q9BZH6	1224 aa		8.85	□□□□□ -0.99
CAST-231	ENST00000510245	S1PR5	Q9H228	398 aa		8.85	□□□□□ -0.99
CAST-231	ENST00000510245	CARS2	Q9HA77	564 aa	Known RBP	8.85	□□□□□ -0.99
CAST-231	ENST00000510245	TMEM260	Q9NX78	707 aa		8.85	□□□□□ -0.99
CAST-231	ENST00000510245	ADAMTS6	Q9UKP5	1117 aa		8.85	□□□□□ -0.99
CAST-231	ENST00000510245	ASPM	Q8IZT6	3477 aa		8.84	□□□□□ -0.99
CAST-231	ENST00000510245	SHISA3	A0PJX4	238 aa		8.84	□□□□□ -0.99
CAST-231	ENST00000510245	MEIS1	O00470	390 aa		8.84	□□□□□ -0.99
CAST-231	ENST00000510245	MMP3	P08254	477 aa		8.84	□□□□□ -0.99
CAST-231	ENST00000510245	ITGA4	P13612	1032 aa		8.84	□□□□□ -0.99
CAST-231	ENST00000510245	HSD3B2	P26439	372 aa		8.84	□□□□□ -0.99
CAST-231	ENST00000510245	GRIA2	P42262	883 aa		8.84	□□□□□ -0.99
CAST-231	ENST00000510245	ZNF143	P52747	638 aa	Predicted RBP	8.84	□□□□□ -0.99
CAST-231	ENST00000510245	BTG3	Q14201	252 aa	Predicted RBP	8.84	□□□□□ -0.99
CAST-231	ENST00000510245	TKFC	Q3LXA3	575 aa		8.84	□□□□□ -0.99
CAST-231	ENST00000510245	SOWAHC	Q53LP3	525 aa	Predicted RBP	8.84	□□□□□ -0.99
CAST-231	ENST00000510245	ANKRD39	Q53RE8	183 aa		8.84	□□□□□ -0.99
CAST-231	ENST00000510245	PLEKHG4	Q58EX7	1191 aa		8.84	□□□□□ -0.99
CAST-231	ENST00000510245	ANKRD54	Q6NXT1	300 aa		8.84	□□□□□ -0.99
CAST-231	ENST00000510245	CERS3	Q8IU89	383 aa		8.84	□□□□□ -0.99
CAST-231	ENST00000510245	SIAH1	Q8IUQ4	282 aa		8.84	□□□□□ -0.99
CAST-231	ENST00000510245	VN1R2	Q8NFZ6	395 aa		8.84	□□□□□ -0.99
CAST-231	ENST00000510245	PIWIL2	Q8TC59	973 aa	Known RBP	8.84	□□□□□ -0.99
CAST-231	ENST00000510245	ATRIP	Q8WXE1	791 aa		8.84	□□□□□ -0.99
CAST-231	ENST00000510245	P2RX5	Q93086	422 aa		8.84	□□□□□ -0.99
CAST-231	ENST00000510245	NEUROD6	Q96NK8	337 aa		8.84	□□□□□ -0.99
CAST-231	ENST00000510245	NECTIN4	Q96NY8	510 aa		8.84	□□□□□ -0.99
CAST-231	ENST00000510245	CDCA3	Q99618	268 aa	Predicted RBP	8.84	□□□□□ -0.99
CAST-231	ENST00000510245	CEP295	Q9C0D2	2601 aa		8.84	□□□□□ -0.99
CAST-231	ENST00000510245	GBP3	Q9H0R5	595 aa		8.84	□□□□□ -0.99
CAST-231	ENST00000510245	NOL6	Q9H6R4	1146 aa	Known RBP	8.84	□□□□□ -0.99
CAST-231	ENST00000510245	ACAD9	Q9H845	621 aa		8.84	□□□□□ -0.99
CAST-231	ENST00000510245	MBNL3	Q9NUK0	354 aa	Known RBP	8.84	□□□□□ -0.99
CAST-231	ENST00000510245	WHRN	Q9P202	907 aa		8.84	□□□□□ -0.99
CAST-231	ENST00000510245	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	8.84	□□□□□ -0.99
CAST-231	ENST00000510245	ZZEF1	O43149	2961 aa		8.84	□□□□□ -0.99
CAST-231	ENST00000510245	ATG2A	Q2TAZ0	1938 aa		8.84	□□□□□ -1
CAST-231	ENST00000510245	FRY	Q5TBA9	3013 aa		8.83	□□□□□ -1
CAST-231	ENST00000510245	RSPH10B2	B2RC85	870 aa		8.83	□□□□□ -1
CAST-231	ENST00000510245	ITGB1	P05556	798 aa		8.83	□□□□□ -1
CAST-231	ENST00000510245	RSPH10B	P0C881	870 aa		8.83	□□□□□ -1
CAST-231	ENST00000510245	NAT2	P11245	290 aa		8.83	□□□□□ -1
CAST-231	ENST00000510245	PPP2R2A	P63151	447 aa		8.83	□□□□□ -1
CAST-231	ENST00000510245	PPP2R5D	Q14738	602 aa		8.83	□□□□□ -1
CAST-231	ENST00000510245	PPP2R5B	Q15173	497 aa		8.83	□□□□□ -1
CAST-231	ENST00000510245	IL31	Q6EBC2	164 aa		8.83	□□□□□ -1
CAST-231	ENST00000510245	CES5A	Q6NT32	575 aa		8.83	□□□□□ -1
CAST-231	ENST00000510245	SLC23A3	Q6PIS1	610 aa		8.83	□□□□□ -1
CAST-231	ENST00000510245	THAP5	Q7Z6K1	395 aa		8.83	□□□□□ -1
CAST-231	ENST00000510245	SESTD1	Q86VW0	696 aa		8.83	□□□□□ -1
CAST-231	ENST00000510245	ZDHHC14	Q8IZN3	488 aa		8.83	□□□□□ -1
CAST-231	ENST00000510245	LRRC47	Q8N1G4	583 aa	Known RBP	8.83	□□□□□ -1
CAST-231	ENST00000510245	C7orf31	Q8N865	590 aa		8.83	□□□□□ -1
CAST-231	ENST00000510245	MIGA1	Q8NAN2	632 aa		8.83	□□□□□ -1
CAST-231	ENST00000510245	PRPF38A	Q8NAV1	312 aa	Known RBP	8.83	□□□□□ -1
CAST-231	ENST00000510245	SPPL3	Q8TCT6	385 aa		8.83	□□□□□ -1
CAST-231	ENST00000510245	POF1B	Q8WVV4	589 aa		8.83	□□□□□ -1
CAST-231	ENST00000510245	APPBP2	Q92624	585 aa		8.83	□□□□□ -1
CAST-231	ENST00000510245	POMK	Q9H5K3	350 aa		8.83	□□□□□ -1
CAST-231	ENST00000510245	PARD6A	Q9NPB6	346 aa		8.83	□□□□□ -1
CAST-231	ENST00000510245	A1CF	Q9NQ94	594 aa	Known RBP	8.83	□□□□□ -1
CAST-231	ENST00000510245	CGGBP1	Q9UFW8	167 aa	Predicted RBP	8.83	□□□□□ -1
CAST-231	ENST00000510245	MCM3AP	O60318	1980 aa		8.82	□□□□□ -1
CAST-231	ENST00000510245	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	8.82	□□□□□ -1
CAST-231	ENST00000510245	ANKRD62	A6NC57	917 aa		8.82	□□□□□ -1
CAST-231	ENST00000510245	WASH4P	A8MWX3	477 aa		8.82	□□□□□ -1
CAST-231	ENST00000510245	PPM1B	O75688	479 aa		8.82	□□□□□ -1
CAST-231	ENST00000510245	DCN	P07585	359 aa	Known RBP	8.82	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms