RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 SLCO1A2P46721 670 aa19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 ACTN3Q08043 901 aaPredicted RBP19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 PLCB4Q15147 1175 aa19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 SUPT20HL1Q3ZLR7 823 aa19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 SLFN12LQ6IEE8 588 aa19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 TRIM72Q6ZMU5 477 aa19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 SNF8Q96H20 258 aa19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 FAM84AQ96KN4 292 aa19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 TRIM7Q9C029 511 aa19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 ACTR5Q9H9F9 607 aaPredicted RBP19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 HOMER3Q9NSC5 361 aa19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 INTS9Q9NV88 658 aaKnown RBP19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 TELO2Q9Y4R8 837 aa19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 STYXL1Q9Y6J8 313 aa19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 PROSCO94903 275 aa19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 ACOT2P49753 483 aa19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 HMGCS2P54868 508 aa19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 NLRP11P59045 1033 aaKnown RBP19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 PTK6Q13882 451 aa19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 TDRD10Q5VZ19 366 aaKnown RBP19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 SAMD7Q7Z3H4 446 aa19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 PHLDB2Q86SQ0 1253 aa19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 ZKSCAN4Q969J2 545 aaPredicted RBP19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 TEX13BQ9BXU2 312 aa19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 MRPL47Q9HD33 250 aaKnown RBP19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 CHST7Q9NS84 486 aa19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 ADAMTS5Q9UNA0 930 aa19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 KIAA1217Q5T5P2 1943 aa19.12■□□□□ 0.65
CCHCR1-228ENST00000509552 LDHAP00338 332 aaKnown RBP19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 PTPRAP18433 802 aa19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 CAV1Q03135 178 aa19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 PTP4A2Q12974 167 aa19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 AUHQ13825 339 aaKnown RBP19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 TMEM132BQ14DG7 1078 aa19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 UBAP2Q5T6F2 1119 aaKnown RBP19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 MON1BQ7L1V2 547 aa19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 CCDC50Q8IVM0 306 aa19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 MICALL2Q8IY33 904 aa19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 DEPTORQ8TB45 409 aa19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 BBXQ8WY36 941 aaPredicted RBP19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 WRNIP1Q96S55 665 aa19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 ADAM7Q9H2U9 754 aa19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 CDC42EP4Q9H3Q1 356 aaKnown RBP19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 PARP14Q460N5 1801 aa19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 K7ERI5 159 aa19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 CUL2Q13617 745 aa19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 MFSD5Q6N075 450 aa19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 ATL2Q8NHH9 583 aa19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 ATG4AQ8WYN0 398 aa19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 P3H4Q92791 437 aa19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 DDX27Q96GQ7 796 aaKnown RBP19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 C12orf42Q96LP6 360 aa19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 CCDC114Q96M63 670 aa19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 DCLK3Q9C098 648 aa19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 CCDC113Q9H0I3 377 aa19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 A1CFQ9NQ94 594 aaKnown RBP19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 RBAKQ9NYW8 714 aaPredicted RBP19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 PCDHB4Q9Y5E5 795 aa19.11■□□□□ 0.65
CCHCR1-228ENST00000509552 C19orf81C9J6K1 198 aa19.1■□□□□ 0.65
CCHCR1-228ENST00000509552 ATP2A1O14983 1001 aa19.1■□□□□ 0.65
CCHCR1-228ENST00000509552 PSTPIP1O43586 416 aa19.1■□□□□ 0.65
CCHCR1-228ENST00000509552 NAMPTP43490 491 aa19.1■□□□□ 0.65
CCHCR1-228ENST00000509552 SPOPLQ6IQ16 392 aa19.1■□□□□ 0.65
CCHCR1-228ENST00000509552 PPP1R2P3Q6NXS1 205 aa19.1■□□□□ 0.65
CCHCR1-228ENST00000509552 RHOT1Q8IXI2 618 aa19.1■□□□□ 0.65
CCHCR1-228ENST00000509552 ATXN2LQ8WWM7 1075 aaKnown RBP19.1■□□□□ 0.65
CCHCR1-228ENST00000509552 TMEM143Q96AN5 459 aa19.1■□□□□ 0.65
CCHCR1-228ENST00000509552 VCPIP1Q96JH7 1222 aa19.1■□□□□ 0.65
CCHCR1-228ENST00000509552 ZNF302Q9NR11 478 aa19.1■□□□□ 0.65
CCHCR1-228ENST00000509552 ADAM22Q9P0K1 906 aa19.1■□□□□ 0.65
CCHCR1-228ENST00000509552 DOCK1Q14185 1865 aa19.1■□□□□ 0.65
CCHCR1-228ENST00000509552 LRRIQ4A6NIV6 560 aa19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 ATF2P15336 505 aa19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 GNA15P30679 374 aa19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 HNRNPH1P31943 449 aaKnown RBP19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 C2CD6Q53TS8 623 aa19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 DALRD3Q5D0E6 543 aaKnown RBP19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 TNFAIP8L3Q5GJ75 292 aa19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 TMEM270Q6UE05 265 aa19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 CCDC13Q8IYE1 715 aa19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 ABRAQ8N0Z2 381 aa19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 SCLT1Q96NL6 688 aa19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 C11orf70Q9BRQ4 267 aa19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 PORCNQ9H237 461 aa19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 ZNF112Q9UJU3 913 aa19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 SCINQ9Y6U3 715 aa19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 VNN1O95497 513 aa19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 PIGRP01833 764 aa19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 OATP04181 439 aa19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 ACO1P21399 889 aaKnown RBP19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 TBXAS1P24557 533 aaPredicted RBP19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 ATP5DP30049 168 aa19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 ADCY8P40145 1251 aa19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 RHBDF2Q6PJF5 856 aa19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 SUGP1Q8IWZ8 645 aaKnown RBP19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 ANKS4BQ8N8V4 417 aa19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 SLC7A3Q8WY07 619 aa19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 KCNN1Q92952 543 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms