RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 MTSS1LQ765P7 747 aa13.8□□□□□ -0.2
KDM3B-206ENST00000509468 HAUS6Q7Z4H7 955 aa13.8□□□□□ -0.2
KDM3B-206ENST00000509468 BRAPQ7Z569 592 aa13.8□□□□□ -0.2
KDM3B-206ENST00000509468 C3orf58Q8NDZ4 430 aa13.8□□□□□ -0.2
KDM3B-206ENST00000509468 APPL2Q8NEU8 664 aa13.8□□□□□ -0.2
KDM3B-206ENST00000509468 KCNN1Q92952 543 aa13.8□□□□□ -0.2
KDM3B-206ENST00000509468 GOLGA2P5Q9HBQ8 144 aa13.8□□□□□ -0.2
KDM3B-206ENST00000509468 SLC2A4RGQ9NR83 387 aa13.8□□□□□ -0.2
KDM3B-206ENST00000509468 ANKFY1Q9P2R3 1169 aa13.8□□□□□ -0.2
KDM3B-206ENST00000509468 MAFFQ9ULX9 164 aa13.8□□□□□ -0.2
KDM3B-206ENST00000509468 PIEZO1Q92508 2521 aa13.8□□□□□ -0.2
KDM3B-206ENST00000509468 DOCK6Q96HP0 2047 aa13.8□□□□□ -0.2
KDM3B-206ENST00000509468 PDCD11Q14690 1871 aaKnown RBP13.79□□□□□ -0.2
KDM3B-206ENST00000509468 PI15O43692 258 aa13.79□□□□□ -0.2
KDM3B-206ENST00000509468 CLTAP09496 248 aa13.79□□□□□ -0.2
KDM3B-206ENST00000509468 HARSP12081 509 aaKnown RBP13.79□□□□□ -0.2
KDM3B-206ENST00000509468 PTPN2P17706 415 aa13.79□□□□□ -0.2
KDM3B-206ENST00000509468 MARCKSP29966 332 aaPredicted RBP13.79□□□□□ -0.2
KDM3B-206ENST00000509468 LONP1P36776 959 aaKnown RBP13.79□□□□□ -0.2
KDM3B-206ENST00000509468 NCKAP1LP55160 1127 aa13.79□□□□□ -0.2
KDM3B-206ENST00000509468 MCL1Q07820 350 aa13.79□□□□□ -0.2
KDM3B-206ENST00000509468 TMEM119Q4V9L6 283 aa13.79□□□□□ -0.2
KDM3B-206ENST00000509468 PABPC1LQ4VXU2 614 aaKnown RBP13.79□□□□□ -0.2
KDM3B-206ENST00000509468 TPGS2Q68CL5 300 aa13.79□□□□□ -0.2
KDM3B-206ENST00000509468 CWF19L1Q69YN2 538 aaKnown RBP13.79□□□□□ -0.2
KDM3B-206ENST00000509468 PHLDB3Q6NSJ2 640 aa13.79□□□□□ -0.2
KDM3B-206ENST00000509468 RSPO2Q6UXX9 243 aaPredicted RBP13.79□□□□□ -0.2
KDM3B-206ENST00000509468 MYCT1Q8N699 235 aa13.79□□□□□ -0.2
KDM3B-206ENST00000509468 DTWD2Q8NBA8 298 aa13.79□□□□□ -0.2
KDM3B-206ENST00000509468 FGF13Q92913 245 aa13.79□□□□□ -0.2
KDM3B-206ENST00000509468 BICD1Q96G01 975 aa13.79□□□□□ -0.2
KDM3B-206ENST00000509468 SHDQ96IW2 340 aa13.79□□□□□ -0.2
KDM3B-206ENST00000509468 FAM86C1Q9NVL1 165 aa13.79□□□□□ -0.2
KDM3B-206ENST00000509468 NUMBLQ9Y6R0 609 aa13.79□□□□□ -0.2
KDM3B-206ENST00000509468 NPHP3-ACAD11A0A0J9YXS1 232 aa13.78□□□□□ -0.2
KDM3B-206ENST00000509468 ARHGEF37A1IGU5 675 aa13.78□□□□□ -0.2
KDM3B-206ENST00000509468 KRBA1A5PL33 1030 aa13.78□□□□□ -0.2
KDM3B-206ENST00000509468 PRRG1O14668 218 aa13.78□□□□□ -0.2
KDM3B-206ENST00000509468 XPOTO43592 962 aaKnown RBP13.78□□□□□ -0.2
KDM3B-206ENST00000509468 TBC1D4O60343 1298 aa13.78□□□□□ -0.2
KDM3B-206ENST00000509468 LRG1P02750 347 aa13.78□□□□□ -0.2
KDM3B-206ENST00000509468 KRT18P05783 430 aaKnown RBP13.78□□□□□ -0.2
KDM3B-206ENST00000509468 ATF2P15336 505 aa13.78□□□□□ -0.2
KDM3B-206ENST00000509468 CYP3A5P20815 502 aa13.78□□□□□ -0.2
KDM3B-206ENST00000509468 PDCP20941 246 aa13.78□□□□□ -0.2
KDM3B-206ENST00000509468 LIG4P49917 911 aa13.78□□□□□ -0.2
KDM3B-206ENST00000509468 NTHL1P78549 312 aa13.78□□□□□ -0.2
KDM3B-206ENST00000509468 MRPL58Q14197 206 aaKnown RBP13.78□□□□□ -0.2
KDM3B-206ENST00000509468 PARM1Q6UWI2 310 aa13.78□□□□□ -0.2
KDM3B-206ENST00000509468 GPBP1Q86WP2 473 aa13.78□□□□□ -0.2
KDM3B-206ENST00000509468 CCDC105Q8IYK2 499 aa13.78□□□□□ -0.2
KDM3B-206ENST00000509468 RASSF8Q8NHQ8 419 aa13.78□□□□□ -0.2
KDM3B-206ENST00000509468 ITFG1Q8TB96 612 aa13.78□□□□□ -0.2
KDM3B-206ENST00000509468 GPR152Q8TDT2 470 aa13.78□□□□□ -0.2
KDM3B-206ENST00000509468 C18orf25Q96B23 403 aaPredicted RBP13.78□□□□□ -0.2
KDM3B-206ENST00000509468 SUSD3Q96L08 255 aa13.78□□□□□ -0.2
KDM3B-206ENST00000509468 TBC1D32Q96NH3 1257 aa13.78□□□□□ -0.2
KDM3B-206ENST00000509468 OXCT2Q9BYC2 517 aaPredicted RBP13.78□□□□□ -0.2
KDM3B-206ENST00000509468 PARVGQ9HBI0 331 aa13.78□□□□□ -0.2
KDM3B-206ENST00000509468 AVENQ9NQS1 362 aaPredicted RBP13.78□□□□□ -0.2
KDM3B-206ENST00000509468 DNMT3BQ9UBC3 853 aaKnown RBP13.78□□□□□ -0.2
KDM3B-206ENST00000509468 CA14Q9ULX7 337 aa13.78□□□□□ -0.2
KDM3B-206ENST00000509468 TBX20Q9UMR3 447 aa13.78□□□□□ -0.2
KDM3B-206ENST00000509468 MRPS23Q9Y3D9 190 aaKnown RBP13.78□□□□□ -0.2
KDM3B-206ENST00000509468 SIT1Q9Y3P8 196 aa13.78□□□□□ -0.2
KDM3B-206ENST00000509468 TRAK2O60296 914 aa13.77□□□□□ -0.21
KDM3B-206ENST00000509468 GFRA3O60609 400 aa13.77□□□□□ -0.21
KDM3B-206ENST00000509468 FAM13AO94988 1023 aa13.77□□□□□ -0.21
KDM3B-206ENST00000509468 PAX3P23760 479 aa13.77□□□□□ -0.21
KDM3B-206ENST00000509468 MCM4P33991 863 aa13.77□□□□□ -0.21
KDM3B-206ENST00000509468 DDIT3P35638 169 aa13.77□□□□□ -0.21
KDM3B-206ENST00000509468 NBL1P41271 181 aa13.77□□□□□ -0.21
KDM3B-206ENST00000509468 ARPP19P56211 112 aa13.77□□□□□ -0.21
KDM3B-206ENST00000509468 ROR1Q01973 937 aa13.77□□□□□ -0.21
KDM3B-206ENST00000509468 DHX8Q14562 1220 aaKnown RBP13.77□□□□□ -0.21
KDM3B-206ENST00000509468 SF3A1Q15459 793 aaKnown RBP13.77□□□□□ -0.21
KDM3B-206ENST00000509468 ZBTB6Q15916 424 aa13.77□□□□□ -0.21
KDM3B-206ENST00000509468 CTXN3Q4LDR2 81 aa13.77□□□□□ -0.21
KDM3B-206ENST00000509468 SEZ6Q53EL9 994 aa13.77□□□□□ -0.21
KDM3B-206ENST00000509468 TCEAL8Q8IYN2 117 aa13.77□□□□□ -0.21
KDM3B-206ENST00000509468 DDX12PQ92771 950 aa13.77□□□□□ -0.21
KDM3B-206ENST00000509468 FGF14Q92915 247 aa13.77□□□□□ -0.21
KDM3B-206ENST00000509468 REEP2Q9BRK0 252 aa13.77□□□□□ -0.21
KDM3B-206ENST00000509468 CYP4F11Q9HBI6 524 aa13.77□□□□□ -0.21
KDM3B-206ENST00000509468 HCFC1R1Q9NWW0 138 aa13.77□□□□□ -0.21
KDM3B-206ENST00000509468 GDE1Q9NZC3 331 aa13.77□□□□□ -0.21
KDM3B-206ENST00000509468 NOTCH4Q99466 2003 aa13.76□□□□□ -0.21
KDM3B-206ENST00000509468 MYH15Q9Y2K3 1946 aa13.76□□□□□ -0.21
KDM3B-206ENST00000509468 TTC26A0AVF1 554 aa13.76□□□□□ -0.21
KDM3B-206ENST00000509468 WDR27A2RRH5 827 aa13.76□□□□□ -0.21
KDM3B-206ENST00000509468 ZNF197O14709 1029 aa13.76□□□□□ -0.21
KDM3B-206ENST00000509468 HNRNPDLO14979 420 aaKnown RBP13.76□□□□□ -0.21
KDM3B-206ENST00000509468 MICAL2O94851 1124 aa13.76□□□□□ -0.21
KDM3B-206ENST00000509468 ZNF131P52739 623 aa13.76□□□□□ -0.21
KDM3B-206ENST00000509468 GPC5P78333 572 aa13.76□□□□□ -0.21
KDM3B-206ENST00000509468 PFKPQ01813 784 aa13.76□□□□□ -0.21
KDM3B-206ENST00000509468 CACNB1Q02641 598 aaPredicted RBP13.76□□□□□ -0.21
KDM3B-206ENST00000509468 PPP2R3AQ06190 1150 aa13.76□□□□□ -0.21
KDM3B-206ENST00000509468 CD302Q8IX05 232 aa13.76□□□□□ -0.21
KDM3B-206ENST00000509468 ELMOD1Q8N336 334 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms