RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 TEX28O15482 410 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 TOM1L1O75674 476 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 B3GAT3O94766 335 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 RHOBTB3O94955 611 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 GCNT3O95395 438 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 GLUD1P00367 558 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 CLCN4P51793 760 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 PMS1P54277 932 aaKnown RBP9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 DSG1Q02413 1049 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 CREMQ03060 361 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 ELAVL2Q12926 359 aaKnown RBP9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 NOLC1Q14978 699 aaKnown RBP eCLIP9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 NAB2Q15742 525 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 CAMK4Q16566 473 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 FAM26FQ5R3K3 315 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 L1TD1Q5T7N2 865 aaKnown RBP9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 FAM171A1Q5VUB5 890 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 KIAA0319Q5VV43 1072 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 ISM2Q6H9L7 571 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 KANK3Q6NY19 840 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 CRELD2Q6UXH1 353 aaPredicted RBP9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 PALB2Q86YC2 1186 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 CEP57L1Q8IYX8 460 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 SLC22A17Q8WUG5 538 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 SUSD6Q92537 303 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 TIGD1Q96MW7 591 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 ZMAT2Q96NC0 199 aaKnown RBP9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 MED15Q96RN5 788 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 PAAF1Q9BRP4 392 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 CBWD1Q9BRT8 395 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 GPR62Q9BZJ7 368 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 GZF1Q9H116 711 aaPredicted RBP9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 KCTD10Q9H3F6 313 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 SFXN1Q9H9B4 322 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 MRPL44Q9H9J2 332 aaKnown RBP9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 SLC38A7Q9NVC3 462 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 USP25Q9UHP3 1055 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 MUTYHQ9UIF7 546 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 MAN1B1Q9UKM7 699 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 NR2E1Q9Y466 385 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 STYXL1Q9Y6J8 313 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 C5orf42Q9H799 3197 aa9.53□□□□□ -0.88
PDLIM5-213ENST00000509357 TSC2P49815 1807 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 SMIM28A0A1B0GU29 152 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 PVALEFA0A1B0GWK0 134 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 HNRNPDLO14979 420 aaKnown RBP9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 TRAPPC3O43617 180 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 LILRB3O75022 631 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 KIF4AO95239 1232 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 SPATA31D3P0C874 917 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 GAP43P17677 238 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 RPL17P18621 184 aaKnown RBP9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 COL9A1P20849 921 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 SCP2P22307 547 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 MCM4P33991 863 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 MCL1Q07820 350 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 BMT2Q1RMZ1 405 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 DCLRE1AQ6PJP8 1040 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 ALKAL1Q6UXT8 129 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 ZPBP2Q6X784 338 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 SPATA31D4Q6ZUB0 917 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 NELFCDQ8IXH7 590 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 CCDC65Q8IXS2 484 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 ZNF507Q8TCN5 953 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 UROC1Q96N76 676 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 LRFN3Q9BTN0 628 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 TTPALQ9BTX7 342 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 PIDD1Q9HB75 910 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 RXFP1Q9HBX9 757 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 MAN1C1Q9NR34 630 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 TMEM63CQ9P1W3 806 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 SEL1LQ9UBV2 794 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 CDH22Q9UJ99 828 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 MAPK8IP1Q9UQF2 711 aa9.52□□□□□ -0.89
PDLIM5-213ENST00000509357 SCN1AP35498 2009 aa9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 A0A0B4J269 797 aa9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 LOC730098B7Z3J9 87 aa9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 ABCD1P33897 745 aa9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 CLCNKBP51801 687 aa9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 SOX4Q06945 474 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 KCNB1Q14721 858 aa9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 PSMD5Q16401 504 aa9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 SLC10A6Q3KNW5 377 aa9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 ZCWPW2Q504Y3 356 aa9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 XKR4Q5GH76 650 aa9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 PDXDC1Q6P996 788 aa9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 PRSS55Q6UWB4 352 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 CD300LGQ6UXG3 332 aa9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 ELOA2Q8IYF1 753 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 TDRD5Q8NAT2 981 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 PLEKHO2Q8TD55 490 aa9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 ACSF2Q96CM8 615 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 FAM212AQ96EL1 285 aa9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 DDX27Q96GQ7 796 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 SNX27Q96L92 541 aa9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 PPP1R10Q96QC0 940 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 PYM1Q9BRP8 204 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 MSTO1Q9BUK6 570 aa9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 CLSTN2Q9H4D0 955 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms