RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 FAM171A1Q5VUB5 890 aa19.78■□□□□ 0.76
CLDND1-220ENST00000508902 JADE1Q6IE81 842 aa19.78■□□□□ 0.76
CLDND1-220ENST00000508902 ENGASEQ8NFI3 743 aa19.78■□□□□ 0.76
CLDND1-220ENST00000508902 LNX1Q8TBB1 728 aaPredicted RBP19.78■□□□□ 0.76
CLDND1-220ENST00000508902 ZNF507Q8TCN5 953 aa19.78■□□□□ 0.76
CLDND1-220ENST00000508902 POMGNT1Q8WZA1 660 aa19.78■□□□□ 0.76
CLDND1-220ENST00000508902 KIF12Q96FN5 646 aa19.78■□□□□ 0.76
CLDND1-220ENST00000508902 LRRC27Q9C0I9 530 aa19.78■□□□□ 0.76
CLDND1-220ENST00000508902 PLEKHA5Q9HAU0 1116 aa19.78■□□□□ 0.76
CLDND1-220ENST00000508902 SLC39A2Q9NP94 309 aa19.78■□□□□ 0.76
CLDND1-220ENST00000508902 MRPL17Q9NRX2 175 aaKnown RBP19.78■□□□□ 0.76
CLDND1-220ENST00000508902 PCDHB13Q9Y5F0 798 aa19.78■□□□□ 0.76
CLDND1-220ENST00000508902 GOLGA8IPA6NC78 632 aa19.77■□□□□ 0.76
CLDND1-220ENST00000508902 GOLGA8JA6NMD2 632 aa19.77■□□□□ 0.76
CLDND1-220ENST00000508902 EIF3DO15371 548 aaKnown RBP eCLIP19.77■□□□□ 0.76
CLDND1-220ENST00000508902 NR1I2O75469 434 aa19.77■□□□□ 0.76
CLDND1-220ENST00000508902 FGFR3P22607 806 aa19.77■□□□□ 0.76
CLDND1-220ENST00000508902 TKTP29401 623 aaKnown RBP19.77■□□□□ 0.76
CLDND1-220ENST00000508902 LRPAP1P30533 357 aa19.77■□□□□ 0.76
CLDND1-220ENST00000508902 STK4Q13043 487 aa19.77■□□□□ 0.76
CLDND1-220ENST00000508902 SNW1Q13573 536 aaKnown RBP19.77■□□□□ 0.76
CLDND1-220ENST00000508902 ALCAMQ13740 583 aa19.77■□□□□ 0.76
CLDND1-220ENST00000508902 BMT2Q1RMZ1 405 aa19.77■□□□□ 0.76
CLDND1-220ENST00000508902 USP41Q3LFD5 358 aa19.77■□□□□ 0.76
CLDND1-220ENST00000508902 KMT5BQ4FZB7 885 aa19.77■□□□□ 0.76
CLDND1-220ENST00000508902 DCLRE1AQ6PJP8 1040 aa19.77■□□□□ 0.76
CLDND1-220ENST00000508902 KRBA2Q6ZNG9 492 aa19.77■□□□□ 0.76
CLDND1-220ENST00000508902 CEP57L1Q8IYX8 460 aa19.77■□□□□ 0.76
CLDND1-220ENST00000508902 FMR1NBQ8N0W7 255 aaPredicted RBP19.77■□□□□ 0.76
CLDND1-220ENST00000508902 C12orf76Q8N812 135 aaPredicted RBP19.77■□□□□ 0.76
CLDND1-220ENST00000508902 RIN2Q8WYP3 895 aaPredicted RBP19.77■□□□□ 0.76
CLDND1-220ENST00000508902 SUSD6Q92537 303 aa19.77■□□□□ 0.76
CLDND1-220ENST00000508902 KHSRPQ92945 711 aaKnown RBP eCLIP19.77■□□□□ 0.762e-6■■■□□ 15
CLDND1-220ENST00000508902 UROC1Q96N76 676 aa19.77■□□□□ 0.76
CLDND1-220ENST00000508902 UHRF1Q96T88 793 aaPredicted RBP19.77■□□□□ 0.76
CLDND1-220ENST00000508902 PCIF1Q9H4Z3 704 aa19.77■□□□□ 0.76
CLDND1-220ENST00000508902 RPF1Q9H9Y2 349 aaKnown RBP19.77■□□□□ 0.76
CLDND1-220ENST00000508902 USP15Q9Y4E8 981 aaPredicted RBP19.77■□□□□ 0.76
CLDND1-220ENST00000508902 PVALEFA0A1B0GWK0 134 aa19.76■□□□□ 0.75
CLDND1-220ENST00000508902 GARTP22102 1010 aa19.76■□□□□ 0.75
CLDND1-220ENST00000508902 PPP2R3AQ06190 1150 aa19.76■□□□□ 0.75
CLDND1-220ENST00000508902 DPYDQ12882 1025 aa19.76■□□□□ 0.75
CLDND1-220ENST00000508902 SMAD2Q15796 467 aaKnown RBP19.76■□□□□ 0.75
CLDND1-220ENST00000508902 SLFN12LQ6IEE8 588 aa19.76■□□□□ 0.75
CLDND1-220ENST00000508902 NELFCDQ8IXH7 590 aa19.76■□□□□ 0.75
CLDND1-220ENST00000508902 PIK3R5Q8WYR1 880 aa19.76■□□□□ 0.75
CLDND1-220ENST00000508902 DDX27Q96GQ7 796 aaKnown RBP19.76■□□□□ 0.75
CLDND1-220ENST00000508902 CLSTN3Q9BQT9 956 aa19.76■□□□□ 0.75
CLDND1-220ENST00000508902 PYM1Q9BRP8 204 aaKnown RBP19.76■□□□□ 0.75
CLDND1-220ENST00000508902 FAM213AQ9BRX8 229 aa19.76■□□□□ 0.75
CLDND1-220ENST00000508902 SLC38A7Q9NVC3 462 aa19.76■□□□□ 0.75
CLDND1-220ENST00000508902 CIZ1Q9ULV3 898 aaPredicted RBP19.76■□□□□ 0.75
CLDND1-220ENST00000508902 PTPRJQ12913 1337 aa19.76■□□□□ 0.75
CLDND1-220ENST00000508902 GADD45BO75293 160 aaPredicted RBP19.75■□□□□ 0.75
CLDND1-220ENST00000508902 ZNF202O95125 648 aa19.75■□□□□ 0.75
CLDND1-220ENST00000508902 SPATA1Q5VX52 437 aa19.75■□□□□ 0.75
CLDND1-220ENST00000508902 GLYCTKQ8IVS8 523 aa19.75■□□□□ 0.75
CLDND1-220ENST00000508902 BRSK2Q8IWQ3 736 aa19.75■□□□□ 0.75
CLDND1-220ENST00000508902 FAM212AQ96EL1 285 aa19.75■□□□□ 0.75
CLDND1-220ENST00000508902 TTPALQ9BTX7 342 aa19.75■□□□□ 0.75
CLDND1-220ENST00000508902 AGPAT3Q9NRZ7 376 aa19.75■□□□□ 0.75
CLDND1-220ENST00000508902 STK39Q9UEW8 545 aa19.75■□□□□ 0.75
CLDND1-220ENST00000508902 USP25Q9UHP3 1055 aa19.75■□□□□ 0.75
CLDND1-220ENST00000508902 EXOC7Q9UPT5 735 aa19.75■□□□□ 0.75
CLDND1-220ENST00000508902 SPTLC1O15269 473 aa19.74■□□□□ 0.75
CLDND1-220ENST00000508902 WEE2P0C1S8 567 aa19.74■□□□□ 0.75
CLDND1-220ENST00000508902 AARSP49588 968 aaKnown RBP eCLIP19.74■□□□□ 0.75
CLDND1-220ENST00000508902 ZP2Q05996 745 aa19.74■□□□□ 0.75
CLDND1-220ENST00000508902 KYAT1Q16773 422 aa19.74■□□□□ 0.75
CLDND1-220ENST00000508902 LILRA6Q6PI73 481 aa19.74■□□□□ 0.75
CLDND1-220ENST00000508902 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.74■□□□□ 0.75
CLDND1-220ENST00000508902 CEP57Q86XR8 500 aa19.74■□□□□ 0.75
CLDND1-220ENST00000508902 GPR65Q8IYL9 337 aa19.74■□□□□ 0.75
CLDND1-220ENST00000508902 SYCP3Q8IZU3 236 aa19.74■□□□□ 0.75
CLDND1-220ENST00000508902 CXorf38Q8TB03 319 aa19.74■□□□□ 0.75
CLDND1-220ENST00000508902 CASP10Q92851 521 aa19.74■□□□□ 0.75
CLDND1-220ENST00000508902 GZF1Q9H116 711 aaPredicted RBP19.74■□□□□ 0.75
CLDND1-220ENST00000508902 TMEM206Q9H813 350 aa19.74■□□□□ 0.75
CLDND1-220ENST00000508902 FNIP2Q9P278 1114 aa19.74■□□□□ 0.75
CLDND1-220ENST00000508902 UBQLN1Q9UMX0 589 aaKnown RBP19.74■□□□□ 0.75
CLDND1-220ENST00000508902 UBE4BO95155 1302 aa19.74■□□□□ 0.75
CLDND1-220ENST00000508902 TBC1D4O60343 1298 aa19.73■□□□□ 0.75
CLDND1-220ENST00000508902 SPATA31D3P0C874 917 aa19.73■□□□□ 0.75
CLDND1-220ENST00000508902 CYP3A5P20815 502 aa19.73■□□□□ 0.75
CLDND1-220ENST00000508902 KLRC2P26717 231 aa19.73■□□□□ 0.75
CLDND1-220ENST00000508902 RPL9P32969 192 aaKnown RBP19.73■□□□□ 0.75
CLDND1-220ENST00000508902 POSTNQ15063 836 aa19.73■□□□□ 0.75
CLDND1-220ENST00000508902 PSMD5Q16401 504 aa19.73■□□□□ 0.75
CLDND1-220ENST00000508902 SPATA31D4Q6ZUB0 917 aa19.73■□□□□ 0.75
CLDND1-220ENST00000508902 CBWD2Q8IUF1 395 aa19.73■□□□□ 0.75
CLDND1-220ENST00000508902 SUSD3Q96L08 255 aa19.73■□□□□ 0.75
CLDND1-220ENST00000508902 FBXL18Q96ME1 805 aa19.73■□□□□ 0.75
CLDND1-220ENST00000508902 EMILIN2Q9BXX0 1053 aa19.73■□□□□ 0.75
CLDND1-220ENST00000508902 MTRRQ9UBK8 725 aa19.73■□□□□ 0.75
CLDND1-220ENST00000508902 NOTCH4Q99466 2003 aa19.73■□□□□ 0.75
CLDND1-220ENST00000508902 ANO9A1A5B4 782 aa19.72■□□□□ 0.75
CLDND1-220ENST00000508902 FSD2A1L4K1 749 aa19.72■□□□□ 0.75
CLDND1-220ENST00000508902 CLIC2O15247 247 aa19.72■□□□□ 0.75
CLDND1-220ENST00000508902 TGM5O43548 720 aa19.72■□□□□ 0.75
CLDND1-220ENST00000508902 EXTL3O43909 919 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms