RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 PPP1R2P41236 205 aa11.51□□□□□ -0.57
POLR2J3-213ENST00000508848 AARSP49588 968 aaKnown RBP eCLIP11.51□□□□□ -0.57
POLR2J3-213ENST00000508848 OSTNP61366 133 aa11.51□□□□□ -0.57
POLR2J3-213ENST00000508848 STK4Q13043 487 aa11.51□□□□□ -0.57
POLR2J3-213ENST00000508848 PTPN14Q15678 1187 aa11.51□□□□□ -0.57
POLR2J3-213ENST00000508848 CCDC85BQ15834 202 aaPredicted RBP11.51□□□□□ -0.57
POLR2J3-213ENST00000508848 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.51□□□□□ -0.57
POLR2J3-213ENST00000508848 BRSK2Q8IWQ3 736 aa11.51□□□□□ -0.57
POLR2J3-213ENST00000508848 GPD1LQ8N335 351 aa11.51□□□□□ -0.57
POLR2J3-213ENST00000508848 KIAA0895Q8NCT3 520 aa11.51□□□□□ -0.57
POLR2J3-213ENST00000508848 SLC22A17Q8WUG5 538 aa11.51□□□□□ -0.57
POLR2J3-213ENST00000508848 CACTINQ8WUQ7 758 aaKnown RBP11.51□□□□□ -0.57
POLR2J3-213ENST00000508848 PIK3R5Q8WYR1 880 aa11.51□□□□□ -0.57
POLR2J3-213ENST00000508848 MSLNLQ96KJ4 702 aa11.51□□□□□ -0.57
POLR2J3-213ENST00000508848 ASB2Q96Q27 587 aa11.51□□□□□ -0.57
POLR2J3-213ENST00000508848 EMILIN2Q9BXX0 1053 aa11.51□□□□□ -0.57
POLR2J3-213ENST00000508848 FGFBP2Q9BYJ0 223 aa11.51□□□□□ -0.57
POLR2J3-213ENST00000508848 GPR62Q9BZJ7 368 aa11.51□□□□□ -0.57
POLR2J3-213ENST00000508848 CXCL16Q9H2A7 254 aa11.51□□□□□ -0.57
POLR2J3-213ENST00000508848 KCTD10Q9H3F6 313 aa11.51□□□□□ -0.57
POLR2J3-213ENST00000508848 ENTPD7Q9NQZ7 604 aa11.51□□□□□ -0.57
POLR2J3-213ENST00000508848 MAFFQ9ULX9 164 aa11.51□□□□□ -0.57
POLR2J3-213ENST00000508848 TRAF3IP3Q9Y228 551 aa11.51□□□□□ -0.57
POLR2J3-213ENST00000508848 FAM50BQ9Y247 325 aa11.51□□□□□ -0.57
POLR2J3-213ENST00000508848 SCN1AP35498 2009 aa11.5□□□□□ -0.57
POLR2J3-213ENST00000508848 PRPF40AO75400 957 aaKnown RBP11.5□□□□□ -0.57
POLR2J3-213ENST00000508848 SMC2O95347 1197 aa11.5□□□□□ -0.57
POLR2J3-213ENST00000508848 URODP06132 367 aa11.5□□□□□ -0.57
POLR2J3-213ENST00000508848 BMP1P13497 986 aa11.5□□□□□ -0.57
POLR2J3-213ENST00000508848 TNFSF9P41273 254 aa11.5□□□□□ -0.57
POLR2J3-213ENST00000508848 GLUD2P49448 558 aa11.5□□□□□ -0.57
POLR2J3-213ENST00000508848 ACOT2P49753 483 aa11.5□□□□□ -0.57
POLR2J3-213ENST00000508848 CLCNKBP51801 687 aa11.5□□□□□ -0.57
POLR2J3-213ENST00000508848 CLDN10P78369 228 aa11.5□□□□□ -0.57
POLR2J3-213ENST00000508848 SOX4Q06945 474 aaPredicted RBP11.5□□□□□ -0.57
POLR2J3-213ENST00000508848 MRPL58Q14197 206 aaKnown RBP11.5□□□□□ -0.57
POLR2J3-213ENST00000508848 ARMCX5Q6P1M9 558 aa11.5□□□□□ -0.57
POLR2J3-213ENST00000508848 ANKS3Q6ZW76 656 aa11.5□□□□□ -0.57
POLR2J3-213ENST00000508848 XXYLT1Q8NBI6 393 aa11.5□□□□□ -0.57
POLR2J3-213ENST00000508848 BEST2Q8NFU1 509 aa11.5□□□□□ -0.57
POLR2J3-213ENST00000508848 CASP10Q92851 521 aa11.5□□□□□ -0.57
POLR2J3-213ENST00000508848 SUSD3Q96L08 255 aa11.5□□□□□ -0.57
POLR2J3-213ENST00000508848 PAAF1Q9BRP4 392 aa11.5□□□□□ -0.57
POLR2J3-213ENST00000508848 TTPALQ9BTX7 342 aa11.5□□□□□ -0.57
POLR2J3-213ENST00000508848 PLEKHA4Q9H4M7 779 aa11.5□□□□□ -0.57
POLR2J3-213ENST00000508848 SLC39A2Q9NP94 309 aa11.5□□□□□ -0.57
POLR2J3-213ENST00000508848 AGPAT3Q9NRZ7 376 aa11.5□□□□□ -0.57
POLR2J3-213ENST00000508848 PRG3Q9Y2Y8 225 aaPredicted RBP11.5□□□□□ -0.57
POLR2J3-213ENST00000508848 BACE2Q9Y5Z0 518 aa11.5□□□□□ -0.57
POLR2J3-213ENST00000508848 HIDE1A8MVS5 230 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 M0QZQ0 153 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 PODXLO00592 558 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 PIRO00625 290 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 TBC1D4O60343 1298 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 KINO60870 393 aaKnown RBP11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 CLASP2O75122 1294 aaKnown RBP11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 KIF4AO95239 1232 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 ADH1AP07327 375 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 CNPP09543 421 aaKnown RBP11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 FAM163BP0C2L3 166 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 CASP1P29466 404 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 PNPLA4P41247 253 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 NRIP1P48552 1158 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 TMEM132DQ14C87 1099 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 TJAP1Q5JTD0 557 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 ZBTB41Q5SVQ8 909 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 KIAA1841Q6NSI8 718 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 LILRA6Q6PI73 481 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 ELMSAN1Q6PJG2 1045 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 ADGRD2Q7Z7M1 963 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 GRAMD1CQ8IYS0 662 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 GLIS3Q8NEA6 775 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 APPL2Q8NEU8 664 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 CMASQ8NFW8 434 aaPredicted RBP11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 SPATA18Q8TC71 538 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 HPS3Q969F9 1004 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 KIF12Q96FN5 646 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 MFSD14AQ96MC6 490 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 KLHL5Q96PQ7 755 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 CBWD1Q9BRT8 395 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 FAM213AQ9BRX8 229 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 DZANK1Q9NVP4 752 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 HSPBP1Q9NZL4 362 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 PRKAG3Q9UGI9 489 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 C5orf42Q9H799 3197 aa11.49□□□□□ -0.57
POLR2J3-213ENST00000508848 CASTOR2A6NHX0 329 aa11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 TISP43B9A030 160 aa11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 OAZ2O95190 189 aa11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 HARSP12081 509 aaKnown RBP11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 RPL13P26373 211 aaKnown RBP11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 NDUFV1P49821 464 aa11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 CLCN4P51793 760 aa11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 AP3M2P53677 418 aa11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 LILRA4P59901 499 aa11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 ITIH3Q06033 890 aa11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 RAB33AQ14088 237 aa11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 PSMD6Q15008 389 aa11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 SKIV2LQ15477 1246 aaKnown RBP11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 DUOXA2Q1HG44 320 aa11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 UVSSAQ2YD98 709 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms