RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 MAFO75444 373 aaPredicted RBP11.8□□□□□ -0.52
SH3RF1-203ENST00000508685 FGGP02679 453 aa11.8□□□□□ -0.52
SH3RF1-203ENST00000508685 GARTP22102 1010 aa11.8□□□□□ -0.52
SH3RF1-203ENST00000508685 GTF2A1P52655 376 aaPredicted RBP11.8□□□□□ -0.52
SH3RF1-203ENST00000508685 WNT7BP56706 349 aa11.8□□□□□ -0.52
SH3RF1-203ENST00000508685 HUNKP57058 714 aa11.8□□□□□ -0.52
SH3RF1-203ENST00000508685 DHX9Q08211 1270 aaKnown RBP11.8□□□□□ -0.52
SH3RF1-203ENST00000508685 C11orf63Q6NUN7 778 aa11.8□□□□□ -0.52
SH3RF1-203ENST00000508685 UBL4BQ8N7F7 174 aa11.8□□□□□ -0.52
SH3RF1-203ENST00000508685 TRAPPC12Q8WVT3 735 aa11.8□□□□□ -0.52
SH3RF1-203ENST00000508685 PRPF31Q8WWY3 499 aaKnown RBP11.8□□□□□ -0.52
SH3RF1-203ENST00000508685 HHIPL1Q96JK4 782 aa11.8□□□□□ -0.52
SH3RF1-203ENST00000508685 MFSD14AQ96MC6 490 aa11.8□□□□□ -0.52
SH3RF1-203ENST00000508685 RPS6KC1Q96S38 1066 aa11.8□□□□□ -0.52
SH3RF1-203ENST00000508685 FMO2Q99518 471 aa11.8□□□□□ -0.52
SH3RF1-203ENST00000508685 PTPN18Q99952 460 aa11.8□□□□□ -0.52
SH3RF1-203ENST00000508685 ERP44Q9BS26 406 aa11.8□□□□□ -0.52
SH3RF1-203ENST00000508685 ANKFY1Q9P2R3 1169 aa11.8□□□□□ -0.52
SH3RF1-203ENST00000508685 SLC12A6Q9UHW9 1150 aa11.8□□□□□ -0.52
SH3RF1-203ENST00000508685 PLXNB2O15031 1838 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 UNCXA6NJT0 531 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 H0YCG3 227 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 MYO1FO00160 1098 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 TTI1O43156 1089 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 LGR5O75473 907 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 ECM2O94769 699 aaPredicted RBP11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 NUDT17P0C025 328 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 ACOT2P49753 483 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 VEGFBP49765 207 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 NLRP11P59045 1033 aaKnown RBP11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 CCNA1P78396 465 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 DR1Q01658 176 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 IFFO1Q0D2I5 559 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 MKRN4PQ13434 485 aaPredicted RBP11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 BYSLQ13895 437 aaKnown RBP11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 TTLL4Q14679 1199 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 ZNF792Q3KQV3 632 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 ZBTB41Q5SVQ8 909 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 LMBRD2Q68DH5 695 aaPredicted RBP11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 KRT39Q6A163 491 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 C6orf89Q6UWU4 347 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 PAXIP1Q6ZW49 1069 aaPredicted RBP11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 PALB2Q86YC2 1186 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 TAS1R2Q8TE23 839 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 TARS2Q9BW92 718 aaKnown RBP11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 TXLNGYQ9BZA5 131 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 CENPHQ9H3R5 247 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 GOLGA6L7A0A1B0GV03 622 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 C5orf60A6NFR6 353 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 ASB14A6NK59 587 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 PMM2O15305 246 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 GJB1P08034 283 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 ITGA4P13612 1032 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 CHRNA3P32297 505 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 HPDP32754 393 aaPredicted RBP11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 FNTAP49354 379 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 MCCD1P59942 119 aaPredicted RBP11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 DUPD1Q68J44 220 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 CCDC121Q6ZUS5 278 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 SV2AQ7L0J3 742 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 DDX42Q86XP3 938 aaKnown RBP eCLIP11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 PPM1KQ8N3J5 372 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 ATP8B4Q8TF62 1192 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 GTF3C2Q8WUA4 911 aaPredicted RBP11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 CYFIP2Q96F07 1278 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 ZNF668Q96K58 619 aaPredicted RBP11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 CABS1Q96KC9 395 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 FAM167AQ96KS9 214 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 AGPAT1Q99943 283 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 STMN4Q9H169 189 aaPredicted RBP11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 GOLPH3Q9H4A6 298 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 TMEM8AQ9HCN3 771 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 ACP6Q9NPH0 428 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 CAPN7Q9Y6W3 813 aa11.79□□□□□ -0.52
SH3RF1-203ENST00000508685 SIP14410 1827 aa11.78□□□□□ -0.52
SH3RF1-203ENST00000508685 PLXNA1Q9UIW2 1896 aa11.78□□□□□ -0.52
SH3RF1-203ENST00000508685 ADCY3O60266 1144 aa11.78□□□□□ -0.52
SH3RF1-203ENST00000508685 SRGAP2CP0DJJ0 459 aa11.78□□□□□ -0.52
SH3RF1-203ENST00000508685 HNRNPH1P31943 449 aaKnown RBP11.78□□□□□ -0.52
SH3RF1-203ENST00000508685 ARHGAP1Q07960 439 aa11.78□□□□□ -0.52
SH3RF1-203ENST00000508685 ACTN3Q08043 901 aaPredicted RBP11.78□□□□□ -0.52
SH3RF1-203ENST00000508685 KRT71Q3SY84 523 aa11.78□□□□□ -0.52
SH3RF1-203ENST00000508685 SEZ6Q53EL9 994 aa11.78□□□□□ -0.52
SH3RF1-203ENST00000508685 SPRYD7Q5W111 196 aa11.78□□□□□ -0.52
SH3RF1-203ENST00000508685 TAPT1Q6NXT6 567 aa11.78□□□□□ -0.52
SH3RF1-203ENST00000508685 CRELD2Q6UXH1 353 aaPredicted RBP11.78□□□□□ -0.52
SH3RF1-203ENST00000508685 PLPPR4Q7Z2D5 763 aa11.78□□□□□ -0.52
SH3RF1-203ENST00000508685 ANKRD23Q86SG2 305 aa11.78□□□□□ -0.52
SH3RF1-203ENST00000508685 SLC20A1Q8WUM9 679 aa11.78□□□□□ -0.52
SH3RF1-203ENST00000508685 TLCD1Q96CP7 247 aa11.78□□□□□ -0.52
SH3RF1-203ENST00000508685 PGM2Q96G03 612 aa11.78□□□□□ -0.52
SH3RF1-203ENST00000508685 CAPNS2Q96L46 248 aa11.78□□□□□ -0.52
SH3RF1-203ENST00000508685 KREMEN1Q96MU8 473 aa11.78□□□□□ -0.52
SH3RF1-203ENST00000508685 NEUROG2Q9H2A3 272 aa11.78□□□□□ -0.52
SH3RF1-203ENST00000508685 YY1AP1Q9H869 796 aa11.78□□□□□ -0.52
SH3RF1-203ENST00000508685 MTRF1LQ9UGC7 380 aaKnown RBP11.78□□□□□ -0.52
SH3RF1-203ENST00000508685 AGO2Q9UKV8 859 aaKnown RBP11.78□□□□□ -0.52
SH3RF1-203ENST00000508685 TRPC6Q9Y210 931 aa11.78□□□□□ -0.52
SH3RF1-203ENST00000508685 SLC45A1Q9Y2W3 748 aa11.78□□□□□ -0.52
SH3RF1-203ENST00000508685 STYXL1Q9Y6J8 313 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms