RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 NR2F2P24468 414 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 LRPAP1P30533 357 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 PBX3P40426 434 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 PNPLA4P41247 253 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 AP3M2P53677 418 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 ENPEPQ07075 957 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 NAB2Q15742 525 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 CAMK4Q16566 473 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 USP41Q3LFD5 358 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 ZBTB41Q5SVQ8 909 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 SPATA1Q5VX52 437 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 JADE1Q6IE81 842 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 FUT10Q6P4F1 479 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 FOXR2Q6PJQ5 311 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 WDR49Q8IV35 697 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 MICALL1Q8N3F8 863 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 MAFAQ8NHW3 353 aaPredicted RBP9.9□□□□□ -0.82
NUP54-207ENST00000508583 ANKRD36BP1Q96IX9 119 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 ZNF560Q96MR9 790 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 HERC2P3Q9BVR0 1158 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 EMILIN2Q9BXX0 1053 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 DPP7Q9UHL4 492 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 MAN1B1Q9UKM7 699 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 ITGA11Q9UKX5 1188 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 PRRC2BQ5JSZ5 2229 aaKnown RBP9.9□□□□□ -0.83
NUP54-207ENST00000508583 GOLGA8IPA6NC78 632 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 GOLGA8JA6NMD2 632 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 FSCN2O14926 492 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 SYN3O14994 580 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 CETN3O15182 167 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 KIF4AO95239 1232 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 EPB41P11171 864 aaKnown RBP9.89□□□□□ -0.83
NUP54-207ENST00000508583 KRT13P13646 458 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 CD44P16070 742 aaKnown RBP9.89□□□□□ -0.83
NUP54-207ENST00000508583 CA8P35219 290 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 PSMC2P35998 433 aaKnown RBP9.89□□□□□ -0.83
NUP54-207ENST00000508583 PRCPP42785 496 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 GLUD2P49448 558 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 CLCN6P51797 869 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 CLCNKBP51801 687 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 TFAMQ00059 246 aaKnown RBP9.89□□□□□ -0.83
NUP54-207ENST00000508583 FKBP3Q00688 224 aaKnown RBP9.89□□□□□ -0.83
NUP54-207ENST00000508583 CYP24A1Q07973 514 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 PAK1Q13153 545 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 MORC3Q14149 939 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 ADGRE1Q14246 886 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 PSMD6Q15008 389 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 SKIV2LQ15477 1246 aaKnown RBP9.89□□□□□ -0.83
NUP54-207ENST00000508583 ZBTB6Q15916 424 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 DUOXA2Q1HG44 320 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 CEP135Q66GS9 1140 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 CENPPQ6IPU0 288 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 CRELD2Q6UXH1 353 aaPredicted RBP9.89□□□□□ -0.83
NUP54-207ENST00000508583 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.89□□□□□ -0.83
NUP54-207ENST00000508583 INTS8Q75QN2 995 aaKnown RBP9.89□□□□□ -0.83
NUP54-207ENST00000508583 PPFIBP1Q86W92 1011 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 ADSSL1Q8N142 457 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 MLKLQ8NB16 471 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 APPL2Q8NEU8 664 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 ZMAT2Q96NC0 199 aaKnown RBP9.89□□□□□ -0.83
NUP54-207ENST00000508583 TTPALQ9BTX7 342 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 MKNK1Q9BUB5 465 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 OXCT2Q9BYC2 517 aaPredicted RBP9.89□□□□□ -0.83
NUP54-207ENST00000508583 ZBP1Q9H171 429 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 DMAC2Q9NW81 257 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 MARCH5Q9NX47 278 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 MAPK8IP1Q9UQF2 711 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 IRAK3Q9Y616 596 aa9.89□□□□□ -0.83
NUP54-207ENST00000508583 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.88□□□□□ -0.83
NUP54-207ENST00000508583 SLC16A3O15427 465 aaKnown RBP9.88□□□□□ -0.83
NUP54-207ENST00000508583 STX10O60499 249 aa9.88□□□□□ -0.83
NUP54-207ENST00000508583 B4GALT3O60512 393 aa9.88□□□□□ -0.83
NUP54-207ENST00000508583 CSPG5O95196 566 aa9.88□□□□□ -0.83
NUP54-207ENST00000508583 CXCL14O95715 111 aa9.88□□□□□ -0.83
NUP54-207ENST00000508583 C1RP00736 705 aa9.88□□□□□ -0.83
NUP54-207ENST00000508583 ADH1AP07327 375 aa9.88□□□□□ -0.83
NUP54-207ENST00000508583 NFICP08651 508 aa9.88□□□□□ -0.83
NUP54-207ENST00000508583 DLATP10515 647 aaKnown RBP9.88□□□□□ -0.83
NUP54-207ENST00000508583 TNNI1P19237 187 aa9.88□□□□□ -0.83
NUP54-207ENST00000508583 CCNE1P24864 410 aa9.88□□□□□ -0.83
NUP54-207ENST00000508583 MCM4P33991 863 aa9.88□□□□□ -0.83
NUP54-207ENST00000508583 DSG1Q02413 1049 aa9.88□□□□□ -0.83
NUP54-207ENST00000508583 MYO1EQ12965 1108 aa9.88□□□□□ -0.83
NUP54-207ENST00000508583 ADAM9Q13443 819 aa9.88□□□□□ -0.83
NUP54-207ENST00000508583 CT47A1Q5JQC4 288 aaPredicted RBP9.88□□□□□ -0.83
NUP54-207ENST00000508583 CCDC183Q5T5S1 534 aa9.88□□□□□ -0.83
NUP54-207ENST00000508583 PLPP4Q5VZY2 271 aa9.88□□□□□ -0.83
NUP54-207ENST00000508583 ANKS3Q6ZW76 656 aa9.88□□□□□ -0.83
NUP54-207ENST00000508583 TMEM173Q86WV6 379 aaPredicted RBP9.88□□□□□ -0.83
NUP54-207ENST00000508583 CBWD2Q8IUF1 395 aa9.88□□□□□ -0.83
NUP54-207ENST00000508583 SMYD4Q8IYR2 804 aaPredicted RBP9.88□□□□□ -0.83
NUP54-207ENST00000508583 MRPL43Q8N983 215 aaKnown RBP9.88□□□□□ -0.83
NUP54-207ENST00000508583 RDH13Q8NBN7 331 aa9.88□□□□□ -0.83
NUP54-207ENST00000508583 ERCC4Q92889 916 aaPredicted RBP9.88□□□□□ -0.83
NUP54-207ENST00000508583 C18orf25Q96B23 403 aaPredicted RBP9.88□□□□□ -0.83
NUP54-207ENST00000508583 MFSD14AQ96MC6 490 aa9.88□□□□□ -0.83
NUP54-207ENST00000508583 IKZF4Q9H2S9 585 aa9.88□□□□□ -0.83
NUP54-207ENST00000508583 TLE6Q9H808 572 aa9.88□□□□□ -0.83
NUP54-207ENST00000508583 DPP3Q9NY33 737 aa9.88□□□□□ -0.83
NUP54-207ENST00000508583 TUBGCP4Q9UGJ1 667 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms