RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 DDHD2O94830 711 aa21.69■■□□□ 1.06
USP53-203ENST00000507597 GALTP07902 379 aa21.69■■□□□ 1.06
USP53-203ENST00000507597 NFICP08651 508 aa21.69■■□□□ 1.06
USP53-203ENST00000507597 AFF1P51825 1210 aaKnown RBP21.69■■□□□ 1.06
USP53-203ENST00000507597 CLDN10P78369 228 aa21.69■■□□□ 1.06
USP53-203ENST00000507597 RBP5P82980 135 aa21.69■■□□□ 1.06
USP53-203ENST00000507597 ELAVL2Q12926 359 aaKnown RBP21.69■■□□□ 1.06
USP53-203ENST00000507597 DCAF17Q5H9S7 520 aaPredicted RBP21.69■■□□□ 1.06
USP53-203ENST00000507597 ZNF280BQ86YH2 543 aa21.69■■□□□ 1.06
USP53-203ENST00000507597 AOPEPQ8N6M6 819 aa21.69■■□□□ 1.06
USP53-203ENST00000507597 COLGALT1Q8NBJ5 622 aa21.69■■□□□ 1.06
USP53-203ENST00000507597 CCDC150Q8NCX0 1101 aa21.69■■□□□ 1.06
USP53-203ENST00000507597 FAM200AQ8TCP9 573 aa21.69■■□□□ 1.06
USP53-203ENST00000507597 TMEM169Q96HH4 297 aa21.69■■□□□ 1.06
USP53-203ENST00000507597 CNOT6LQ96LI5 555 aaKnown RBP21.69■■□□□ 1.06
USP53-203ENST00000507597 ZNF560Q96MR9 790 aa21.69■■□□□ 1.06
USP53-203ENST00000507597 NKX2-4Q9H2Z4 354 aa21.69■■□□□ 1.06
USP53-203ENST00000507597 CASTOR2A6NHX0 329 aa21.68■■□□□ 1.06
USP53-203ENST00000507597 LRRIQ3A6PVS8 624 aaPredicted RBP21.68■■□□□ 1.06
USP53-203ENST00000507597 NRP1O14786 923 aa21.68■■□□□ 1.06
USP53-203ENST00000507597 TADA2AO75478 443 aa21.68■■□□□ 1.06
USP53-203ENST00000507597 CTNNB1P35222 781 aa21.68■■□□□ 1.06
USP53-203ENST00000507597 MCCD1P59942 119 aaPredicted RBP21.68■■□□□ 1.06
USP53-203ENST00000507597 ERVK-21P61565 698 aa21.68■■□□□ 1.06
USP53-203ENST00000507597 MYO1EQ12965 1108 aa21.68■■□□□ 1.06
USP53-203ENST00000507597 BIRC3Q13489 604 aa21.68■■□□□ 1.06
USP53-203ENST00000507597 BORCS6Q96GS4 357 aa21.68■■□□□ 1.06
USP53-203ENST00000507597 C11orf84Q9BUA3 381 aaPredicted RBP21.68■■□□□ 1.06
USP53-203ENST00000507597 IMPG2Q9BZV3 1241 aa21.68■■□□□ 1.06
USP53-203ENST00000507597 TMEM8AQ9HCN3 771 aa21.68■■□□□ 1.06
USP53-203ENST00000507597 PLAGL2Q9UPG8 496 aa21.68■■□□□ 1.06
USP53-203ENST00000507597 NUB1Q9Y5A7 615 aa21.68■■□□□ 1.06
USP53-203ENST00000507597 TMEM189-UBE2V1I3L0A0 370 aa21.67■■□□□ 1.06
USP53-203ENST00000507597 RBAK-RBAKDNI3L0D1 243 aa21.67■■□□□ 1.06
USP53-203ENST00000507597 PODXLO00592 558 aa21.67■■□□□ 1.06
USP53-203ENST00000507597 B3GAT3O94766 335 aa21.67■■□□□ 1.06
USP53-203ENST00000507597 KRT19P08727 400 aa21.67■■□□□ 1.06
USP53-203ENST00000507597 PBX2P40425 430 aa21.67■■□□□ 1.06
USP53-203ENST00000507597 TAP1Q03518 808 aa21.67■■□□□ 1.06
USP53-203ENST00000507597 NAB2Q15742 525 aa21.67■■□□□ 1.06
USP53-203ENST00000507597 KRT39Q6A163 491 aa21.67■■□□□ 1.06
USP53-203ENST00000507597 TRAPPC11Q7Z392 1133 aa21.67■■□□□ 1.06
USP53-203ENST00000507597 EFCAB13Q8IY85 973 aa21.67■■□□□ 1.06
USP53-203ENST00000507597 C18orf25Q96B23 403 aaPredicted RBP21.67■■□□□ 1.06
USP53-203ENST00000507597 MTMR12Q9C0I1 747 aa21.67■■□□□ 1.06
USP53-203ENST00000507597 YBX2Q9Y2T7 364 aaKnown RBP21.67■■□□□ 1.06
USP53-203ENST00000507597 FNDC1Q4ZHG4 1894 aaPredicted RBP21.66■■□□□ 1.06
USP53-203ENST00000507597 LCHNA4D1U4 455 aa21.66■■□□□ 1.06
USP53-203ENST00000507597 KCNJ18B7U540 433 aa21.66■■□□□ 1.06
USP53-203ENST00000507597 P4HA2O15460 535 aa21.66■■□□□ 1.06
USP53-203ENST00000507597 MEFVO15553 781 aaPredicted RBP21.66■■□□□ 1.06
USP53-203ENST00000507597 MYOGP15173 224 aa21.66■■□□□ 1.06
USP53-203ENST00000507597 ATICP31939 592 aa21.66■■□□□ 1.06
USP53-203ENST00000507597 SLC11A1P49279 550 aa21.66■■□□□ 1.06
USP53-203ENST00000507597 CLCNKBP51801 687 aa21.66■■□□□ 1.06
USP53-203ENST00000507597 UBE3AQ05086 875 aa21.66■■□□□ 1.06
USP53-203ENST00000507597 KCNJ12Q14500 433 aa21.66■■□□□ 1.06
USP53-203ENST00000507597 UPP1Q16831 310 aa21.66■■□□□ 1.06
USP53-203ENST00000507597 TRIM59Q8IWR1 403 aa21.66■■□□□ 1.06
USP53-203ENST00000507597 LRRC52Q8N7C0 313 aa21.66■■□□□ 1.06
USP53-203ENST00000507597 MED15Q96RN5 788 aa21.66■■□□□ 1.06
USP53-203ENST00000507597 FANCLQ9NW38 375 aa21.66■■□□□ 1.06
USP53-203ENST00000507597 DNAJB4Q9UDY4 337 aa21.66■■□□□ 1.06
USP53-203ENST00000507597 TUBGCP4Q9UGJ1 667 aa21.66■■□□□ 1.06
USP53-203ENST00000507597 ADAM28Q9UKQ2 775 aa21.66■■□□□ 1.06
USP53-203ENST00000507597 PRG3Q9Y2Y8 225 aaPredicted RBP21.66■■□□□ 1.06
USP53-203ENST00000507597 RALGAPA2Q2PPJ7 1873 aa21.66■■□□□ 1.06
USP53-203ENST00000507597 C5orf67F2Z3F1 127 aa21.65■■□□□ 1.06
USP53-203ENST00000507597 AFPP02771 609 aaKnown RBP21.65■■□□□ 1.06
USP53-203ENST00000507597 ITGB3P05106 788 aa21.65■■□□□ 1.06
USP53-203ENST00000507597 TAF6P49848 677 aa21.65■■□□□ 1.06
USP53-203ENST00000507597 MXI1P50539 228 aa21.65■■□□□ 1.06
USP53-203ENST00000507597 PLCB3Q01970 1234 aa21.65■■□□□ 1.06
USP53-203ENST00000507597 MAN2A1Q16706 1144 aa21.65■■□□□ 1.06
USP53-203ENST00000507597 SV2CQ496J9 727 aa21.65■■□□□ 1.06
USP53-203ENST00000507597 EPC2Q52LR7 807 aa21.65■■□□□ 1.06
USP53-203ENST00000507597 TCP11X2Q5H9J9 407 aa21.65■■□□□ 1.06
USP53-203ENST00000507597 C9orf57Q5W0N0 161 aa21.65■■□□□ 1.06
USP53-203ENST00000507597 FBXO22Q8NEZ5 403 aa21.65■■□□□ 1.06
USP53-203ENST00000507597 IGSF21Q96ID5 467 aa21.65■■□□□ 1.06
USP53-203ENST00000507597 POP1Q99575 1024 aaKnown RBP21.65■■□□□ 1.06
USP53-203ENST00000507597 CBX8Q9HC52 389 aa21.65■■□□□ 1.06
USP53-203ENST00000507597 SAMSN1Q9NSI8 373 aaKnown RBP21.65■■□□□ 1.06
USP53-203ENST00000507597 AGAP1Q9UPQ3 857 aa21.65■■□□□ 1.06
USP53-203ENST00000507597 SF3B1O75533 1304 aaKnown RBP eCLIP21.64■■□□□ 1.05
USP53-203ENST00000507597 ANO9A1A5B4 782 aa21.64■■□□□ 1.05
USP53-203ENST00000507597 PMM2O15305 246 aa21.64■■□□□ 1.05
USP53-203ENST00000507597 CLSTN1O94985 981 aa21.64■■□□□ 1.05
USP53-203ENST00000507597 C4BPAP04003 597 aaKnown RBP21.64■■□□□ 1.05
USP53-203ENST00000507597 TRIM49P0CI25 452 aa21.64■■□□□ 1.05
USP53-203ENST00000507597 TRIM49CP0CI26 452 aa21.64■■□□□ 1.05
USP53-203ENST00000507597 P4HA1P13674 534 aa21.64■■□□□ 1.05
USP53-203ENST00000507597 KCNH2Q12809 1159 aa21.64■■□□□ 1.05
USP53-203ENST00000507597 ZACNQ401N2 412 aa21.64■■□□□ 1.05
USP53-203ENST00000507597 FILIP1LQ4L180 1135 aa21.64■■□□□ 1.05
USP53-203ENST00000507597 LMBRD2Q68DH5 695 aaPredicted RBP21.64■■□□□ 1.05
USP53-203ENST00000507597 GPR153Q6NV75 609 aa21.64■■□□□ 1.05
USP53-203ENST00000507597 SV2AQ7L0J3 742 aa21.64■■□□□ 1.05
USP53-203ENST00000507597 SLC39A11Q8N1S5 342 aa21.64■■□□□ 1.05
USP53-203ENST00000507597 C1orf127Q8N9H9 656 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms