RNA–Protein interactions for RNA: ENST00000507468.5

AFF1-206, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 1 (best)

Gene AFF1, Length 1,486 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-206ENST00000507468 FIBCD1Q8N539 461 aa22.69■■□□□ 1.22
AFF1-206ENST00000507468 ANKRD36BP1Q96IX9 119 aa22.69■■□□□ 1.22
AFF1-206ENST00000507468 FAM193BQ96PV7 902 aaPredicted RBP22.69■■□□□ 1.22
AFF1-206ENST00000507468 PAAF1Q9BRP4 392 aa22.69■■□□□ 1.22
AFF1-206ENST00000507468 PBX4Q9BYU1 374 aa22.69■■□□□ 1.22
AFF1-206ENST00000507468 PDCD11Q14690 1871 aaKnown RBP22.69■■□□□ 1.22
AFF1-206ENST00000507468 CASTOR2A6NHX0 329 aa22.68■■□□□ 1.22
AFF1-206ENST00000507468 C4BPAP04003 597 aaKnown RBP22.68■■□□□ 1.22
AFF1-206ENST00000507468 ATP1A3P13637 1013 aa22.68■■□□□ 1.22
AFF1-206ENST00000507468 GCLMP48507 274 aa22.68■■□□□ 1.22
AFF1-206ENST00000507468 SCARA3Q6AZY7 606 aa22.68■■□□□ 1.22
AFF1-206ENST00000507468 TRAPPC11Q7Z392 1133 aa22.68■■□□□ 1.22
AFF1-206ENST00000507468 C1orf127Q8N9H9 656 aa22.68■■□□□ 1.22
AFF1-206ENST00000507468 MMRN2Q9H8L6 949 aa22.68■■□□□ 1.22
AFF1-206ENST00000507468 DPP3Q9NY33 737 aa22.68■■□□□ 1.22
AFF1-206ENST00000507468 YBX2Q9Y2T7 364 aaKnown RBP22.68■■□□□ 1.22
AFF1-206ENST00000507468 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.68■■□□□ 1.22
AFF1-206ENST00000507468 TDRD15B5MCY1 1934 aaKnown RBP22.68■■□□□ 1.22
AFF1-206ENST00000507468 A0A1W2PPC1 479 aa22.67■■□□□ 1.22
AFF1-206ENST00000507468 GOLGA6L19H0YKK7 550 aa22.67■■□□□ 1.22
AFF1-206ENST00000507468 ZC3H11AO75152 810 aaKnown RBP eCLIP22.67■■□□□ 1.22
AFF1-206ENST00000507468 ARHGEF15O94989 841 aa22.67■■□□□ 1.22
AFF1-206ENST00000507468 TNNC2P02585 160 aa22.67■■□□□ 1.22
AFF1-206ENST00000507468 LINC00271P0C7V0 271 aa22.67■■□□□ 1.22
AFF1-206ENST00000507468 LRPAP1P30533 357 aa22.67■■□□□ 1.22
AFF1-206ENST00000507468 GTF2H1P32780 548 aa22.67■■□□□ 1.22
AFF1-206ENST00000507468 AP3M2P53677 418 aa22.67■■□□□ 1.22
AFF1-206ENST00000507468 C15orf39Q6ZRI6 1047 aa22.67■■□□□ 1.22
AFF1-206ENST00000507468 SV2AQ7L0J3 742 aa22.67■■□□□ 1.22
AFF1-206ENST00000507468 CXorf38Q8TB03 319 aa22.67■■□□□ 1.22
AFF1-206ENST00000507468 RABGGTAQ92696 567 aa22.67■■□□□ 1.22
AFF1-206ENST00000507468 TUBGCP2Q9BSJ2 902 aa22.67■■□□□ 1.22
AFF1-206ENST00000507468 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.67■■□□□ 1.22
AFF1-206ENST00000507468 CA3P07451 260 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 CDK11BP21127 795 aaKnown RBP22.66■■□□□ 1.22
AFF1-206ENST00000507468 SLC11A1P49279 550 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 CLCNKBP51801 687 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 BCAR1P56945 870 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 KCNH2Q12809 1159 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 KRT31Q15323 416 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 ZACNQ401N2 412 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 CBWD6Q4V339 395 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 CBWD3Q5JTY5 395 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 CBWD5Q5RIA9 395 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 SPOUT1Q5T280 376 aaKnown RBP22.66■■□□□ 1.22
AFF1-206ENST00000507468 TDRD10Q5VZ19 366 aaKnown RBP22.66■■□□□ 1.22
AFF1-206ENST00000507468 CLP1Q92989 425 aaKnown RBP22.66■■□□□ 1.22
AFF1-206ENST00000507468 TMEM175Q9BSA9 504 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 RBSNQ9H1K0 784 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 TMEM8AQ9HCN3 771 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 LIMA1Q9UHB6 759 aaKnown RBP22.66■■□□□ 1.22
AFF1-206ENST00000507468 SIX4Q9UIU6 781 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 ANO9A1A5B4 782 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 LINC01553A4QN01 128 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 NRP1O14786 923 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 STX10O60499 249 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 ALDH2P05091 517 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 ITGB3P05106 788 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 GALTP07902 379 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 PBX3P40426 434 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 OR1G1P47890 313 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 MAN2A1Q16706 1144 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 UPP1Q16831 310 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 UROC1Q96N76 676 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 TAB2Q9NYJ8 693 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 ITGA11Q9UKX5 1188 aa22.66■■□□□ 1.22
AFF1-206ENST00000507468 LRRC10BA6NIK2 292 aa22.65■■□□□ 1.22
AFF1-206ENST00000507468 PPEF2O14830 753 aa22.65■■□□□ 1.22
AFF1-206ENST00000507468 CST3P01034 146 aaPredicted RBP22.65■■□□□ 1.22
AFF1-206ENST00000507468 PRKCSHP14314 528 aaPredicted RBP22.65■■□□□ 1.22
AFF1-206ENST00000507468 IGFBP6P24592 240 aaPredicted RBP22.65■■□□□ 1.22
AFF1-206ENST00000507468 RPL9P32969 192 aaKnown RBP22.65■■□□□ 1.22
AFF1-206ENST00000507468 TPM4P67936 248 aa22.65■■□□□ 1.22
AFF1-206ENST00000507468 SMAD3P84022 425 aaKnown RBP22.65■■□□□ 1.22
AFF1-206ENST00000507468 BIRC3Q13489 604 aa22.65■■□□□ 1.22
AFF1-206ENST00000507468 RAB30Q15771 203 aa22.65■■□□□ 1.22
AFF1-206ENST00000507468 MIIPQ5JXC2 388 aa22.65■■□□□ 1.22
AFF1-206ENST00000507468 C9orf57Q5W0N0 161 aa22.65■■□□□ 1.22
AFF1-206ENST00000507468 KRT39Q6A163 491 aa22.65■■□□□ 1.22
AFF1-206ENST00000507468 APTXQ7Z2E3 356 aaKnown RBP22.65■■□□□ 1.22
AFF1-206ENST00000507468 DDX27Q96GQ7 796 aaKnown RBP22.65■■□□□ 1.22
AFF1-206ENST00000507468 MSRAQ9UJ68 235 aa22.65■■□□□ 1.22
AFF1-206ENST00000507468 GBF1Q92538 1859 aa22.64■■□□□ 1.22
AFF1-206ENST00000507468 NT5C1B-RDH14C9J2C7 533 aa22.64■■□□□ 1.21
AFF1-206ENST00000507468 F8W810 466 aa22.64■■□□□ 1.21
AFF1-206ENST00000507468 PODXLO00592 558 aa22.64■■□□□ 1.21
AFF1-206ENST00000507468 PIRO00625 290 aa22.64■■□□□ 1.21
AFF1-206ENST00000507468 VNN1O95497 513 aa22.64■■□□□ 1.21
AFF1-206ENST00000507468 AFPP02771 609 aaKnown RBP22.64■■□□□ 1.21
AFF1-206ENST00000507468 LAG3P18627 525 aa22.64■■□□□ 1.21
AFF1-206ENST00000507468 POLR2BP30876 1174 aaKnown RBP22.64■■□□□ 1.21
AFF1-206ENST00000507468 FMO5P49326 533 aa22.64■■□□□ 1.21
AFF1-206ENST00000507468 MXI1P50539 228 aa22.64■■□□□ 1.21
AFF1-206ENST00000507468 LRIT3Q3SXY7 679 aa22.64■■□□□ 1.21
AFF1-206ENST00000507468 VWA3BQ502W6 1294 aa22.64■■□□□ 1.21
AFF1-206ENST00000507468 KCNT2Q6UVM3 1135 aa22.64■■□□□ 1.21
AFF1-206ENST00000507468 SPRED2Q7Z698 418 aa22.64■■□□□ 1.21
AFF1-206ENST00000507468 COLGALT1Q8NBJ5 622 aa22.64■■□□□ 1.21
AFF1-206ENST00000507468 NKX2-4Q9H2Z4 354 aa22.64■■□□□ 1.21
AFF1-206ENST00000507468 AGAP1Q9UPQ3 857 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms