RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 E9PMD0 336 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 SIAH2O43255 324 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 BMP15O95972 392 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 PRKCBP05771 671 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 PDCP20941 246 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 AKAP5P24588 427 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 GUCY2CP25092 1073 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 MTHFRP42898 656 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 OR1G1P47890 313 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 SMCPP49901 116 aaPredicted RBP8.79□□□□□ -1
SCN1A-207ENST00000507401 SCNN1GP51170 649 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 CBX1P83916 185 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 GRIK3Q13003 919 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 TUSC3Q13454 348 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 PTPN14Q15678 1187 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 ZNF787Q6DD87 383 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 RINT1Q6NUQ1 792 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 LLGL2Q6P1M3 1020 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 CYP26C1Q6V0L0 522 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 C1orf186Q6ZWK4 172 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 BRAPQ7Z569 592 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 SYT2Q8N9I0 419 aaPredicted RBP8.79□□□□□ -1
SCN1A-207ENST00000507401 KIAA1524Q8TCG1 905 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 HDAC7Q8WUI4 952 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 RIPOR3Q96MK2 946 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 RPS6KC1Q96S38 1066 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 RHOBTB2Q9BYZ6 727 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 NXF3Q9H4D5 531 aaKnown RBP8.79□□□□□ -1
SCN1A-207ENST00000507401 PDZD7Q9H5P4 517 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 MARCH5Q9NX47 278 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 TMEM63CQ9P1W3 806 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 PARP2Q9UGN5 583 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 TNFSF13BQ9Y275 285 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 NR2E1Q9Y466 385 aa8.79□□□□□ -1
SCN1A-207ENST00000507401 TDRD15B5MCY1 1934 aaKnown RBP8.79□□□□□ -1
SCN1A-207ENST00000507401 TTC24A2A3L6 582 aaPredicted RBP8.78□□□□□ -1
SCN1A-207ENST00000507401 PP2D1A8MPX8 630 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 TULP2O00295 520 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 TADA2AO75478 443 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 PAPLNO95428 1278 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 F12P00748 615 aaPredicted RBP8.78□□□□□ -1
SCN1A-207ENST00000507401 URODP06132 367 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 THP07101 528 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 CNPP09543 421 aaKnown RBP8.78□□□□□ -1
SCN1A-207ENST00000507401 SCP2P22307 547 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 KLRC2P26717 231 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 CDC25AP30304 524 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 CA8P35219 290 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 NPTX2P47972 431 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 GLUD2P49448 558 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 CLCN4P51793 760 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 SMTNP53814 917 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 PEX3P56589 373 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 DSG1Q02413 1049 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 CREMQ03060 361 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 USP41Q3LFD5 358 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 DCAF4L1Q3SXM0 396 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 NT5DC1Q5TFE4 455 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 ATF7IP2Q5U623 682 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 KIAA1841Q6NSI8 718 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 ELMSAN1Q6PJG2 1045 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 BMP8AQ7Z5Y6 402 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 CDR2LQ86X02 465 aaPredicted RBP8.78□□□□□ -1
SCN1A-207ENST00000507401 DAW1Q8N136 415 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 AUTS2Q8WXX7 1259 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 KCNN1Q92952 543 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 RPGRIP1Q96KN7 1286 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 PNMA5Q96PV4 448 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 HERC2P3Q9BVR0 1158 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 APOL6Q9BWW8 343 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 PTPRHQ9HD43 1115 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.78□□□□□ -1
SCN1A-207ENST00000507401 SNTG2Q9NY99 539 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 KLK14Q9P0G3 267 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 ARHGAP28Q9P2N2 729 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 DACH1Q9UI36 760 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 ADAM28Q9UKQ2 775 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 USTQ9Y2C2 406 aa8.78□□□□□ -1
SCN1A-207ENST00000507401 PRG3Q9Y2Y8 225 aaPredicted RBP8.78□□□□□ -1
SCN1A-207ENST00000507401 VWA3AA6NCI4 1184 aa8.77□□□□□ -1.01
SCN1A-207ENST00000507401 CCDC169A6NNP5 214 aa8.77□□□□□ -1.01
SCN1A-207ENST00000507401 H0YCG3 227 aa8.77□□□□□ -1.01
SCN1A-207ENST00000507401 HIP1RO75146 1068 aa8.77□□□□□ -1.01
SCN1A-207ENST00000507401 ADH1AP07327 375 aa8.77□□□□□ -1.01
SCN1A-207ENST00000507401 EPCAMP16422 314 aa8.77□□□□□ -1.01
SCN1A-207ENST00000507401 LONP1P36776 959 aaKnown RBP8.77□□□□□ -1.01
SCN1A-207ENST00000507401 UBA7P41226 1012 aa8.77□□□□□ -1.01
SCN1A-207ENST00000507401 DMP1Q13316 513 aaPredicted RBP8.77□□□□□ -1.01
SCN1A-207ENST00000507401 NAB2Q15742 525 aa8.77□□□□□ -1.01
SCN1A-207ENST00000507401 TMEM132AQ24JP5 1023 aa8.77□□□□□ -1.01
SCN1A-207ENST00000507401 XKR4Q5GH76 650 aa8.77□□□□□ -1.01
SCN1A-207ENST00000507401 C15orf39Q6ZRI6 1047 aa8.77□□□□□ -1.01
SCN1A-207ENST00000507401 TAS1R1Q7RTX1 841 aa8.77□□□□□ -1.01
SCN1A-207ENST00000507401 GPR149Q86SP6 731 aa8.77□□□□□ -1.01
SCN1A-207ENST00000507401 CABP7Q86V35 215 aa8.77□□□□□ -1.01
SCN1A-207ENST00000507401 ZNF397Q8NF99 534 aaPredicted RBP8.77□□□□□ -1.01
SCN1A-207ENST00000507401 CMASQ8NFW8 434 aaPredicted RBP8.77□□□□□ -1.01
SCN1A-207ENST00000507401 CDK5RAP3Q96JB5 506 aa8.77□□□□□ -1.01
SCN1A-207ENST00000507401 MFSD14AQ96MC6 490 aa8.77□□□□□ -1.01
SCN1A-207ENST00000507401 FBXL18Q96ME1 805 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms