RNA–Protein interactions for RNA: ENST00000507395.1

SFXN1-207, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-207ENST00000507395 FOXD4L1Q9NU39 408 aa19.3■□□□□ 0.68
SFXN1-207ENST00000507395 TUBGCP4Q9UGJ1 667 aa19.3■□□□□ 0.68
SFXN1-207ENST00000507395 CDY1Q9Y6F8 540 aa19.3■□□□□ 0.68
SFXN1-207ENST00000507395 A0A0B4J269 797 aa19.29■□□□□ 0.68
SFXN1-207ENST00000507395 TRAPPC3O43617 180 aa19.29■□□□□ 0.68
SFXN1-207ENST00000507395 STX6O43752 255 aa19.29■□□□□ 0.68
SFXN1-207ENST00000507395 FAM13AO94988 1023 aa19.29■□□□□ 0.68
SFXN1-207ENST00000507395 C8AP07357 584 aa19.29■□□□□ 0.68
SFXN1-207ENST00000507395 POU2F2P09086 479 aa19.29■□□□□ 0.68
SFXN1-207ENST00000507395 CLTAP09496 248 aa19.29■□□□□ 0.68
SFXN1-207ENST00000507395 HNRNPA1P09651 372 aaKnown RBP eCLIP19.29■□□□□ 0.68
SFXN1-207ENST00000507395 SLC39A14Q15043 492 aa19.29■□□□□ 0.68
SFXN1-207ENST00000507395 SLC8B1Q6J4K2 584 aa19.29■□□□□ 0.68
SFXN1-207ENST00000507395 ANKS3Q6ZW76 656 aa19.29■□□□□ 0.68
SFXN1-207ENST00000507395 MAP4K3Q8IVH8 894 aa19.29■□□□□ 0.68
SFXN1-207ENST00000507395 RSAD2Q8WXG1 361 aa19.29■□□□□ 0.68
SFXN1-207ENST00000507395 DNAJC19Q96DA6 116 aa19.29■□□□□ 0.68
SFXN1-207ENST00000507395 STRA6Q9BX79 667 aa19.29■□□□□ 0.68
SFXN1-207ENST00000507395 ZDBF2Q9HCK1 2354 aa19.29■□□□□ 0.68
SFXN1-207ENST00000507395 DMDP11532 3685 aa19.28■□□□□ 0.68
SFXN1-207ENST00000507395 MYH15Q9Y2K3 1946 aa19.28■□□□□ 0.68
SFXN1-207ENST00000507395 A0A087X0B3 334 aa19.28■□□□□ 0.68
SFXN1-207ENST00000507395 ANKRD63C9JTQ0 380 aa19.28■□□□□ 0.68
SFXN1-207ENST00000507395 K7ENM7 598 aa19.28■□□□□ 0.68
SFXN1-207ENST00000507395 SYN3O14994 580 aa19.28■□□□□ 0.68
SFXN1-207ENST00000507395 ABLIM3O94929 683 aa19.28■□□□□ 0.68
SFXN1-207ENST00000507395 AVPR2P30518 371 aa19.28■□□□□ 0.68
SFXN1-207ENST00000507395 LRPAP1P30533 357 aa19.28■□□□□ 0.68
SFXN1-207ENST00000507395 NASPP49321 788 aaPredicted RBP19.28■□□□□ 0.68
SFXN1-207ENST00000507395 NHLH1Q02575 133 aa19.28■□□□□ 0.68
SFXN1-207ENST00000507395 CEBPZQ03701 1054 aaKnown RBP19.28■□□□□ 0.68
SFXN1-207ENST00000507395 SPAG1Q07617 926 aa19.28■□□□□ 0.68
SFXN1-207ENST00000507395 TDGQ13569 410 aa19.28■□□□□ 0.68
SFXN1-207ENST00000507395 ENOX2Q16206 610 aaKnown RBP19.28■□□□□ 0.68
SFXN1-207ENST00000507395 UVSSAQ2YD98 709 aa19.28■□□□□ 0.68
SFXN1-207ENST00000507395 ZC2HC1CQ53FD0 456 aaPredicted RBP19.28■□□□□ 0.68
SFXN1-207ENST00000507395 VARS2Q5ST30 1063 aaKnown RBP19.28■□□□□ 0.68
SFXN1-207ENST00000507395 AXDND1Q5T1B0 1012 aaPredicted RBP19.28■□□□□ 0.68
SFXN1-207ENST00000507395 GRASPQ7Z6J2 395 aaPredicted RBP19.28■□□□□ 0.68
SFXN1-207ENST00000507395 SUGP1Q8IWZ8 645 aaKnown RBP19.28■□□□□ 0.68
SFXN1-207ENST00000507395 STAMQ92783 540 aa19.28■□□□□ 0.68
SFXN1-207ENST00000507395 SUSD3Q96L08 255 aa19.28■□□□□ 0.68
SFXN1-207ENST00000507395 ZSCAN16Q9H4T2 348 aaPredicted RBP19.28■□□□□ 0.68
SFXN1-207ENST00000507395 IGSF9Q9P2J2 1179 aa19.28■□□□□ 0.68
SFXN1-207ENST00000507395 STK17AQ9UEE5 414 aa19.28■□□□□ 0.68
SFXN1-207ENST00000507395 DUSP12Q9UNI6 340 aa19.28■□□□□ 0.68
SFXN1-207ENST00000507395 MYO15AQ9UKN7 3530 aa19.27■□□□□ 0.68
SFXN1-207ENST00000507395 MYMKA6NI61 221 aa19.27■□□□□ 0.68
SFXN1-207ENST00000507395 LACTBL1A8MY62 500 aa19.27■□□□□ 0.68
SFXN1-207ENST00000507395 ANHXE9PGG2 379 aa19.27■□□□□ 0.68
SFXN1-207ENST00000507395 HNRNPDLO14979 420 aaKnown RBP19.27■□□□□ 0.68
SFXN1-207ENST00000507395 OGTO15294 1046 aa19.27■□□□□ 0.68
SFXN1-207ENST00000507395 PPP1R37O75864 691 aa19.27■□□□□ 0.68
SFXN1-207ENST00000507395 LAMP2P13473 410 aa19.27■□□□□ 0.68
SFXN1-207ENST00000507395 GBP2P32456 591 aaPredicted RBP19.27■□□□□ 0.68
SFXN1-207ENST00000507395 LIG4P49917 911 aa19.27■□□□□ 0.68
SFXN1-207ENST00000507395 NTHL1P78549 312 aa19.27■□□□□ 0.68
SFXN1-207ENST00000507395 ROR1Q01973 937 aa19.27■□□□□ 0.68
SFXN1-207ENST00000507395 TCF15Q12870 199 aa19.27■□□□□ 0.68
SFXN1-207ENST00000507395 SLC7A14Q8TBB6 771 aa19.27■□□□□ 0.68
SFXN1-207ENST00000507395 IKZF4Q9H2S9 585 aa19.27■□□□□ 0.68
SFXN1-207ENST00000507395 PIDD1Q9HB75 910 aa19.27■□□□□ 0.68
SFXN1-207ENST00000507395 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.27■□□□□ 0.68
SFXN1-207ENST00000507395 CPSF3Q9UKF6 684 aaKnown RBP19.27■□□□□ 0.68
SFXN1-207ENST00000507395 STYXL1Q9Y6J8 313 aa19.27■□□□□ 0.68
SFXN1-207ENST00000507395 USP34Q70CQ2 3546 aa19.26■□□□□ 0.67
SFXN1-207ENST00000507395 WDR27A2RRH5 827 aa19.26■□□□□ 0.67
SFXN1-207ENST00000507395 TISP43B9A030 160 aa19.26■□□□□ 0.67
SFXN1-207ENST00000507395 NARSO43776 548 aaKnown RBP19.26■□□□□ 0.67
SFXN1-207ENST00000507395 CYP3A5P20815 502 aa19.26■□□□□ 0.67
SFXN1-207ENST00000507395 AARSP49588 968 aaKnown RBP eCLIP19.26■□□□□ 0.67
SFXN1-207ENST00000507395 PPM1LQ5SGD2 360 aa19.26■□□□□ 0.67
SFXN1-207ENST00000507395 LIN9Q5TKA1 542 aa19.26■□□□□ 0.67
SFXN1-207ENST00000507395 RTL10Q7L3V2 364 aa19.26■□□□□ 0.67
SFXN1-207ENST00000507395 DYMQ7RTS9 669 aa19.26■□□□□ 0.67
SFXN1-207ENST00000507395 ZNF720Q7Z2F6 126 aa19.26■□□□□ 0.67
SFXN1-207ENST00000507395 SLC44A3Q8N4M1 653 aa19.26■□□□□ 0.67
SFXN1-207ENST00000507395 RASSF8Q8NHQ8 419 aa19.26■□□□□ 0.67
SFXN1-207ENST00000507395 DDX12PQ92771 950 aa19.26■□□□□ 0.67
SFXN1-207ENST00000507395 BICD1Q96G01 975 aa19.26■□□□□ 0.67
SFXN1-207ENST00000507395 ANK1P16157 1881 aa19.26■□□□□ 0.67
SFXN1-207ENST00000507395 M0QZQ0 153 aa19.25■□□□□ 0.67
SFXN1-207ENST00000507395 CCL16O15467 120 aa19.25■□□□□ 0.67
SFXN1-207ENST00000507395 KRT18P05783 430 aaKnown RBP19.25■□□□□ 0.67
SFXN1-207ENST00000507395 NPR3P17342 541 aa19.25■□□□□ 0.67
SFXN1-207ENST00000507395 KYAT1Q16773 422 aa19.25■□□□□ 0.67
SFXN1-207ENST00000507395 RRAGBQ5VZM2 374 aa19.25■□□□□ 0.67
SFXN1-207ENST00000507395 POTEHQ6S545 545 aa19.25■□□□□ 0.67
SFXN1-207ENST00000507395 SFR1Q86XK3 245 aa19.25■□□□□ 0.67
SFXN1-207ENST00000507395 LINC00301Q8NCQ3 95 aa19.25■□□□□ 0.67
SFXN1-207ENST00000507395 ZNF461Q8TAF7 563 aa19.25■□□□□ 0.67
SFXN1-207ENST00000507395 ZHX3Q9H4I2 956 aa19.25■□□□□ 0.67
SFXN1-207ENST00000507395 HCFC1R1Q9NWW0 138 aa19.25■□□□□ 0.67
SFXN1-207ENST00000507395 DNMT3BQ9UBC3 853 aaKnown RBP19.25■□□□□ 0.67
SFXN1-207ENST00000507395 CCDC39Q9UFE4 941 aa19.25■□□□□ 0.67
SFXN1-207ENST00000507395 FBXL5Q9UKA1 691 aa19.25■□□□□ 0.67
SFXN1-207ENST00000507395 ARHGEF37A1IGU5 675 aa19.24■□□□□ 0.67
SFXN1-207ENST00000507395 FRMD3A2A2Y4 597 aa19.24■□□□□ 0.67
SFXN1-207ENST00000507395 TBCAO75347 108 aaKnown RBP19.24■□□□□ 0.67
SFXN1-207ENST00000507395 FSHRP23945 695 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms