RNA–Protein interactions for RNA: ENST00000507292.1

SRPK1-208, Transcript of SRSF protein kinase 1, humanhuman

TSL 3

Gene SRPK1, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-208ENST00000507292 TOPORSQ9NS56 1045 aaPredicted RBP3.31□□□□□ -1.88
SRPK1-208ENST00000507292 MTO1Q9Y2Z2 717 aaKnown RBP3.31□□□□□ -1.88
SRPK1-208ENST00000507292 POMCP01189 267 aa3.3□□□□□ -1.88
SRPK1-208ENST00000507292 ATP5JP18859 108 aa3.3□□□□□ -1.88
SRPK1-208ENST00000507292 GUCY2FP51841 1108 aa3.3□□□□□ -1.88
SRPK1-208ENST00000507292 TMPRSS15P98073 1019 aa3.3□□□□□ -1.88
SRPK1-208ENST00000507292 CYP2A13Q16696 494 aa3.3□□□□□ -1.88
SRPK1-208ENST00000507292 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.3□□□□□ -1.88
SRPK1-208ENST00000507292 NECAB2Q7Z6G3 386 aa3.3□□□□□ -1.88
SRPK1-208ENST00000507292 DRC7Q8IY82 874 aa3.3□□□□□ -1.88
SRPK1-208ENST00000507292 SH2D3CQ8N5H7 860 aa3.3□□□□□ -1.88
SRPK1-208ENST00000507292 GPR156Q8NFN8 814 aa3.3□□□□□ -1.88
SRPK1-208ENST00000507292 OR7D4Q8NG98 312 aa3.3□□□□□ -1.88
SRPK1-208ENST00000507292 SCARB1Q8WTV0 552 aa3.3□□□□□ -1.88
SRPK1-208ENST00000507292 SMG7Q92540 1137 aaKnown RBP3.3□□□□□ -1.88
SRPK1-208ENST00000507292 FUBP1Q96AE4 644 aaKnown RBP3.3□□□□□ -1.88
SRPK1-208ENST00000507292 PAWRQ96IZ0 340 aaKnown RBP3.3□□□□□ -1.88
SRPK1-208ENST00000507292 PDLIM2Q96JY6 352 aa3.3□□□□□ -1.88
SRPK1-208ENST00000507292 METTL14Q9HCE5 456 aaKnown RBP3.3□□□□□ -1.88
SRPK1-208ENST00000507292 TMEM74BQ9NUR3 256 aa3.3□□□□□ -1.88
SRPK1-208ENST00000507292 TYW1Q9NV66 732 aaKnown RBP3.3□□□□□ -1.88
SRPK1-208ENST00000507292 SLC17A6Q9P2U8 582 aa3.3□□□□□ -1.88
SRPK1-208ENST00000507292 DMTF1Q9Y222 760 aa3.3□□□□□ -1.88
SRPK1-208ENST00000507292 SIK3Q9Y2K2 1263 aa3.3□□□□□ -1.88
SRPK1-208ENST00000507292 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.29□□□□□ -1.88
SRPK1-208ENST00000507292 NEMP1O14524 444 aa3.29□□□□□ -1.88
SRPK1-208ENST00000507292 GPR39O43194 453 aa3.29□□□□□ -1.88
SRPK1-208ENST00000507292 ERN1O75460 977 aaKnown RBP3.29□□□□□ -1.88
SRPK1-208ENST00000507292 PDGFRBP09619 1106 aa3.29□□□□□ -1.88
SRPK1-208ENST00000507292 BPIP17213 487 aa3.29□□□□□ -1.88
SRPK1-208ENST00000507292 GCSHP23434 173 aa3.29□□□□□ -1.88
SRPK1-208ENST00000507292 ECHS1P30084 290 aa3.29□□□□□ -1.88
SRPK1-208ENST00000507292 PER3P56645 1201 aa3.29□□□□□ -1.88
SRPK1-208ENST00000507292 EXOSC10Q01780 885 aaKnown RBP3.29□□□□□ -1.88
SRPK1-208ENST00000507292 SP140Q13342 867 aa3.29□□□□□ -1.88
SRPK1-208ENST00000507292 FAM50AQ14320 339 aaKnown RBP3.29□□□□□ -1.88
SRPK1-208ENST00000507292 STAT4Q14765 748 aa3.29□□□□□ -1.88
SRPK1-208ENST00000507292 UBXN2BQ14CS0 331 aa3.29□□□□□ -1.88
SRPK1-208ENST00000507292 FSCN1Q16658 493 aaKnown RBP3.29□□□□□ -1.88
SRPK1-208ENST00000507292 ZNF529Q6P280 563 aa3.29□□□□□ -1.88
SRPK1-208ENST00000507292 FOXR2Q6PJQ5 311 aa3.29□□□□□ -1.88
SRPK1-208ENST00000507292 UBE3BQ7Z3V4 1068 aa3.29□□□□□ -1.88
SRPK1-208ENST00000507292 STRA8Q7Z7C7 330 aa3.29□□□□□ -1.88
SRPK1-208ENST00000507292 FAM43AQ8N2R8 423 aa3.29□□□□□ -1.88
SRPK1-208ENST00000507292 PQLC1Q8N2U9 271 aa3.29□□□□□ -1.88
SRPK1-208ENST00000507292 MYOCQ99972 504 aa3.29□□□□□ -1.88
SRPK1-208ENST00000507292 PUS7LQ9H0K6 701 aaKnown RBP3.29□□□□□ -1.88
SRPK1-208ENST00000507292 UNKLQ9H9P5 680 aaKnown RBP3.29□□□□□ -1.88
SRPK1-208ENST00000507292 BCO1Q9HAY6 547 aa3.29□□□□□ -1.88
SRPK1-208ENST00000507292 FBXO34Q9NWN3 711 aa3.29□□□□□ -1.88
SRPK1-208ENST00000507292 KCTD5Q9NXV2 234 aa3.29□□□□□ -1.88
SRPK1-208ENST00000507292 SLC5A4Q9NY91 659 aa3.29□□□□□ -1.88
SRPK1-208ENST00000507292 DDX56Q9NY93 547 aaKnown RBP3.29□□□□□ -1.88
SRPK1-208ENST00000507292 KCNE5Q9UJ90 142 aa3.29□□□□□ -1.88
SRPK1-208ENST00000507292 WASHC2AQ641Q2 1341 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 CGB1A6NKQ9 187 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 ZFPL1O95159 310 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 EYA4O95677 639 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 S100BP04271 92 aaPredicted RBP3.28□□□□□ -1.88
SRPK1-208ENST00000507292 IL2RBP14784 551 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 FPR1P21462 350 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 ENPP1P22413 925 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 SREBF1P36956 1147 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 ALDH1A3P47895 512 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 CDKN1CP49918 316 aaPredicted RBP3.28□□□□□ -1.88
SRPK1-208ENST00000507292 ZNF81P51508 661 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 VAV2P52735 878 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 SESN3P58005 492 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 PROK1P58294 105 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 EVA1CP58658 441 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 KRTAP10-7P60409 375 aaPredicted RBP3.28□□□□□ -1.88
SRPK1-208ENST00000507292 ITKQ08881 620 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 GEN1Q17RS7 908 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 ZNF788Q6ZQV5 615 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 MICALCLQ6ZW33 695 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 CLRN3Q8NCR9 226 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 TSPEARQ8WU66 669 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 TGFBRAP1Q8WUH2 860 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 ANKS1AQ92625 1134 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 MTMR8Q96EF0 704 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 MARS2Q96GW9 593 aaKnown RBP3.28□□□□□ -1.88
SRPK1-208ENST00000507292 RAX2Q96IS3 184 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 ZNF778Q96MU6 729 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 HEPHQ9BQS7 1158 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 SENP6Q9GZR1 1112 aaPredicted RBP3.28□□□□□ -1.88
SRPK1-208ENST00000507292 QRSL1Q9H0R6 528 aaKnown RBP3.28□□□□□ -1.88
SRPK1-208ENST00000507292 DMRT3Q9NQL9 472 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 MOCS1Q9NZB8 636 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 ARPP21Q9UBL0 812 aaPredicted RBP3.28□□□□□ -1.88
SRPK1-208ENST00000507292 SLC23A1Q9UHI7 598 aa3.28□□□□□ -1.88
SRPK1-208ENST00000507292 PHLDB1Q86UU1 1377 aa3.27□□□□□ -1.89
SRPK1-208ENST00000507292 WASHC2CQ9Y4E1 1318 aa3.27□□□□□ -1.89
SRPK1-208ENST00000507292 PEX1O43933 1283 aa3.27□□□□□ -1.89
SRPK1-208ENST00000507292 PROP1O75360 226 aa3.27□□□□□ -1.89
SRPK1-208ENST00000507292 CKBP12277 381 aa3.27□□□□□ -1.89
SRPK1-208ENST00000507292 ID4P47928 161 aa3.27□□□□□ -1.89
SRPK1-208ENST00000507292 SF3B3Q15393 1217 aaKnown RBP3.27□□□□□ -1.89
SRPK1-208ENST00000507292 ADRM1Q16186 407 aa3.27□□□□□ -1.89
SRPK1-208ENST00000507292 COLGALT2Q8IYK4 626 aa3.27□□□□□ -1.89
SRPK1-208ENST00000507292 SSH3Q8TE77 659 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms