RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 CFIP05156 583 aa8.05□□□□□ -1.12
VCAN-207ENST00000507162 FTH1P19P0C7X4 201 aa8.05□□□□□ -1.12
VCAN-207ENST00000507162 BCKDHBP21953 392 aa8.05□□□□□ -1.12
VCAN-207ENST00000507162 SMARCA1P28370 1054 aa8.05□□□□□ -1.12
VCAN-207ENST00000507162 ABCG1P45844 678 aa8.05□□□□□ -1.12
VCAN-207ENST00000507162 SPIRE1Q08AE8 756 aa8.05□□□□□ -1.12
VCAN-207ENST00000507162 SART3Q15020 963 aaKnown RBP8.05□□□□□ -1.12
VCAN-207ENST00000507162 TEAD2Q15562 447 aa8.05□□□□□ -1.12
VCAN-207ENST00000507162 TARBP2Q15633 366 aaKnown RBP8.05□□□□□ -1.12
VCAN-207ENST00000507162 PMS2CLQ68D20 193 aa8.05□□□□□ -1.12
VCAN-207ENST00000507162 IQCEQ6IPM2 695 aa8.05□□□□□ -1.12
VCAN-207ENST00000507162 ARMCX6Q7L4S7 300 aa8.05□□□□□ -1.12
VCAN-207ENST00000507162 ELMOD1Q8N336 334 aa8.05□□□□□ -1.12
VCAN-207ENST00000507162 ADAMTS14Q8WXS8 1223 aa8.05□□□□□ -1.12
VCAN-207ENST00000507162 E2F7Q96AV8 911 aa8.05□□□□□ -1.12
VCAN-207ENST00000507162 CPB2Q96IY4 423 aa8.05□□□□□ -1.12
VCAN-207ENST00000507162 CAMK1GQ96NX5 476 aa8.05□□□□□ -1.12
VCAN-207ENST00000507162 LZTS2Q9BRK4 669 aa8.05□□□□□ -1.12
VCAN-207ENST00000507162 TPSD1Q9BZJ3 242 aa8.05□□□□□ -1.12
VCAN-207ENST00000507162 TRIM6Q9C030 488 aaPredicted RBP8.05□□□□□ -1.12
VCAN-207ENST00000507162 IFT122Q9HBG6 1241 aa8.05□□□□□ -1.12
VCAN-207ENST00000507162 CYP4F11Q9HBI6 524 aa8.05□□□□□ -1.12
VCAN-207ENST00000507162 GIT1Q9Y2X7 761 aa8.05□□□□□ -1.12
VCAN-207ENST00000507162 CREBBPQ92793 2442 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 TRABD2BA6NFA1 517 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 TTLL13PA6NNM8 815 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 UPK3BL1B0FP48 263 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 WDR64B1ANS9 1081 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 UPK3BL2E5RIL1 263 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 CHMP2AO43633 222 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 RNF40O75150 1001 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 MICAL2O94851 1124 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 ERLIN2O94905 339 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 KIF4AO95239 1232 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 CALM1P0DP23 149 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 CALM2P0DP24 149 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 CALM3P0DP25 149 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 SDSP20132 328 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 ITPKBP27987 946 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 GNAQP50148 359 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 CFHR1Q03591 330 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 TNK2Q07912 1038 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 SRSF1Q07955 248 aaKnown RBP eCLIP8.04□□□□□ -1.12
VCAN-207ENST00000507162 NCBP1Q09161 790 aaKnown RBP8.04□□□□□ -1.12
VCAN-207ENST00000507162 ELAVL2Q12926 359 aaKnown RBP8.04□□□□□ -1.12
VCAN-207ENST00000507162 HNRNPDQ14103 355 aaKnown RBP8.04□□□□□ -1.12
VCAN-207ENST00000507162 MAPK6Q16659 721 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 JAKMIP3Q5VZ66 844 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 FSTL4Q6MZW2 842 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 SRGAP1Q7Z6B7 1085 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 TTC30AQ86WT1 665 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 MARCH9Q86YJ5 346 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 SCUBE3Q8IX30 993 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 HACE1Q8IYU2 909 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 GSTCDQ8NEC7 633 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 TRPV4Q9HBA0 871 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 EVLQ9UI08 416 aaPredicted RBP8.04□□□□□ -1.12
VCAN-207ENST00000507162 COL4A3BPQ9Y5P4 624 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 MGAQ8IWI9 3026 aa8.04□□□□□ -1.12
VCAN-207ENST00000507162 COL6A6A6NMZ7 2263 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 A0A087WV48 116 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 IGKV6-21A0A0C4DH24 114 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 ARHGEF37A1IGU5 675 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 CAPN8A6NHC0 703 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 SH3BP5O60239 455 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 MOSPD3O75425 235 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 MAFO75444 373 aaPredicted RBP8.03□□□□□ -1.12
VCAN-207ENST00000507162 EGFP01133 1207 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 RXRAP19793 462 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 SREBF1P36956 1147 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 ADCY7P51828 1080 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 NAPAP54920 295 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 GFPT1Q06210 699 aaPredicted RBP8.03□□□□□ -1.12
VCAN-207ENST00000507162 GRIK3Q13003 919 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 PSMD2Q13200 908 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 TUSC3Q13454 348 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 DMC1Q14565 340 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 PTPAQ15257 358 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 ITPRIPL2Q3MIP1 535 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 ARHGAP29Q52LW3 1261 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 PRR16Q569H4 304 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 NFXL1Q6ZNB6 911 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 C11orf74Q86VG3 221 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 RAB11FIP4Q86YS3 637 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 ARID3BQ8IVW6 561 aaPredicted RBP8.03□□□□□ -1.12
VCAN-207ENST00000507162 TMEFF1Q8IYR6 380 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 ZNF654Q8IZM8 581 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 LSM14AQ8ND56 463 aaKnown RBP8.03□□□□□ -1.12
VCAN-207ENST00000507162 OR2I1PQ8NGU4 316 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 RPLP0P6Q8NHW5 317 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 ZNF461Q8TAF7 563 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 PRPF31Q8WWY3 499 aaKnown RBP8.03□□□□□ -1.12
VCAN-207ENST00000507162 MARVELD3Q96A59 401 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 TMEM143Q96AN5 459 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 LRRC3BQ96PB8 259 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 DSCC1Q9BVC3 393 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 NIFKQ9BYG3 293 aaKnown RBP8.03□□□□□ -1.12
VCAN-207ENST00000507162 GPR88Q9GZN0 384 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 CSRNP2Q9H175 543 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms