RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 PTPN14Q15678 1187 aa19.72■□□□□ 0.75
NPHP4-210ENST00000506941 SPATA1Q5VX52 437 aa19.72■□□□□ 0.75
NPHP4-210ENST00000506941 ISM2Q6H9L7 571 aa19.72■□□□□ 0.75
NPHP4-210ENST00000506941 DCLRE1AQ6PJP8 1040 aa19.72■□□□□ 0.75
NPHP4-210ENST00000506941 XXYLT1Q8NBI6 393 aa19.72■□□□□ 0.75
NPHP4-210ENST00000506941 GOLGA5Q8TBA6 731 aa19.72■□□□□ 0.75
NPHP4-210ENST00000506941 DDX27Q96GQ7 796 aaKnown RBP19.72■□□□□ 0.75
NPHP4-210ENST00000506941 TSPAN18Q96SJ8 248 aa19.72■□□□□ 0.75
NPHP4-210ENST00000506941 PDE11AQ9HCR9 933 aa19.72■□□□□ 0.75
NPHP4-210ENST00000506941 DMAC2Q9NW81 257 aa19.72■□□□□ 0.75
NPHP4-210ENST00000506941 C2CD2Q9Y426 696 aa19.72■□□□□ 0.75
NPHP4-210ENST00000506941 SF3B1O75533 1304 aaKnown RBP eCLIP19.72■□□□□ 0.75
NPHP4-210ENST00000506941 PPEF2O14830 753 aa19.71■□□□□ 0.75
NPHP4-210ENST00000506941 B3GAT3O94766 335 aa19.71■□□□□ 0.75
NPHP4-210ENST00000506941 CXCL14O95715 111 aa19.71■□□□□ 0.75
NPHP4-210ENST00000506941 BMP6P22004 513 aa19.71■□□□□ 0.75
NPHP4-210ENST00000506941 LRPAP1P30533 357 aa19.71■□□□□ 0.75
NPHP4-210ENST00000506941 RPL9P32969 192 aaKnown RBP19.71■□□□□ 0.75
NPHP4-210ENST00000506941 NRIP1P48552 1158 aa19.71■□□□□ 0.75
NPHP4-210ENST00000506941 COL19A1Q14993 1142 aa19.71■□□□□ 0.75
NPHP4-210ENST00000506941 SNRNP35Q16560 246 aaKnown RBP19.71■□□□□ 0.75
NPHP4-210ENST00000506941 ZCWPW2Q504Y3 356 aa19.71■□□□□ 0.75
NPHP4-210ENST00000506941 COBLL1Q53SF7 1204 aa19.71■□□□□ 0.75
NPHP4-210ENST00000506941 RBM23Q86U06 439 aaKnown RBP19.71■□□□□ 0.75
NPHP4-210ENST00000506941 MRPL43Q8N983 215 aaKnown RBP19.71■□□□□ 0.75
NPHP4-210ENST00000506941 RDH13Q8NBN7 331 aa19.71■□□□□ 0.75
NPHP4-210ENST00000506941 TMEM174Q8WUU8 243 aa19.71■□□□□ 0.75
NPHP4-210ENST00000506941 CHST7Q9NS84 486 aa19.71■□□□□ 0.75
NPHP4-210ENST00000506941 STK39Q9UEW8 545 aa19.71■□□□□ 0.75
NPHP4-210ENST00000506941 IRAK3Q9Y616 596 aa19.71■□□□□ 0.75
NPHP4-210ENST00000506941 PTPRJQ12913 1337 aa19.71■□□□□ 0.75
NPHP4-210ENST00000506941 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.7■□□□□ 0.74
NPHP4-210ENST00000506941 ZNF233A6NK53 670 aa19.7■□□□□ 0.74
NPHP4-210ENST00000506941 I3L4J1 428 aa19.7■□□□□ 0.74
NPHP4-210ENST00000506941 PER2O15055 1255 aa19.7■□□□□ 0.74
NPHP4-210ENST00000506941 LILRB3O75022 631 aa19.7■□□□□ 0.74
NPHP4-210ENST00000506941 KIF20AO95235 890 aa19.7■□□□□ 0.74
NPHP4-210ENST00000506941 NR3C1P04150 777 aa19.7■□□□□ 0.74
NPHP4-210ENST00000506941 BRCC3P46736 316 aa19.7■□□□□ 0.74
NPHP4-210ENST00000506941 SKIV2LQ15477 1246 aaKnown RBP19.7■□□□□ 0.74
NPHP4-210ENST00000506941 KIAA0319Q5VV43 1072 aa19.7■□□□□ 0.74
NPHP4-210ENST00000506941 SLC9A9Q8IVB4 645 aa19.7■□□□□ 0.74
NPHP4-210ENST00000506941 BEST2Q8NFU1 509 aa19.7■□□□□ 0.74
NPHP4-210ENST00000506941 GPT2Q8TD30 523 aa19.7■□□□□ 0.74
NPHP4-210ENST00000506941 GZF1Q9H116 711 aaPredicted RBP19.7■□□□□ 0.74
NPHP4-210ENST00000506941 CLSTN2Q9H4D0 955 aa19.7■□□□□ 0.74
NPHP4-210ENST00000506941 IGFLR1Q9H665 355 aa19.7■□□□□ 0.74
NPHP4-210ENST00000506941 KIAA1586Q9HCI6 787 aa19.7■□□□□ 0.74
NPHP4-210ENST00000506941 TRAF3IP3Q9Y228 551 aa19.7■□□□□ 0.74
NPHP4-210ENST00000506941 BIN1O00499 593 aa19.69■□□□□ 0.74
NPHP4-210ENST00000506941 C2CD2LO14523 706 aa19.69■□□□□ 0.74
NPHP4-210ENST00000506941 LINC01565O15544 149 aa19.69■□□□□ 0.74
NPHP4-210ENST00000506941 XPOTO43592 962 aaKnown RBP19.69■□□□□ 0.74
NPHP4-210ENST00000506941 CA8P35219 290 aa19.69■□□□□ 0.74
NPHP4-210ENST00000506941 GLUD2P49448 558 aa19.69■□□□□ 0.74
NPHP4-210ENST00000506941 RBM10P98175 930 aaKnown RBP19.69■□□□□ 0.74
NPHP4-210ENST00000506941 DSG1Q02413 1049 aa19.69■□□□□ 0.74
NPHP4-210ENST00000506941 CYP24A1Q07973 514 aa19.69■□□□□ 0.74
NPHP4-210ENST00000506941 MORC3Q14149 939 aa19.69■□□□□ 0.74
NPHP4-210ENST00000506941 DUSP6Q16828 381 aa19.69■□□□□ 0.74
NPHP4-210ENST00000506941 USP41Q3LFD5 358 aa19.69■□□□□ 0.74
NPHP4-210ENST00000506941 RTP2Q5QGT7 225 aa19.69■□□□□ 0.74
NPHP4-210ENST00000506941 FAM171A1Q5VUB5 890 aa19.69■□□□□ 0.74
NPHP4-210ENST00000506941 LMBRD2Q68DH5 695 aaPredicted RBP19.69■□□□□ 0.74
NPHP4-210ENST00000506941 TLE6Q9H808 572 aa19.69■□□□□ 0.74
NPHP4-210ENST00000506941 C2orf16Q68DN1 1984 aa19.68■□□□□ 0.74
NPHP4-210ENST00000506941 TCF20Q9UGU0 1960 aaKnown RBP19.68■□□□□ 0.74
NPHP4-210ENST00000506941 ANO9A1A5B4 782 aa19.68■□□□□ 0.74
NPHP4-210ENST00000506941 TULP1O00294 542 aaPredicted RBP19.68■□□□□ 0.74
NPHP4-210ENST00000506941 CALUO43852 315 aaPredicted RBP19.68■□□□□ 0.74
NPHP4-210ENST00000506941 EXOC3O60645 756 aa19.68■□□□□ 0.74
NPHP4-210ENST00000506941 GLP2RO95838 553 aa19.68■□□□□ 0.74
NPHP4-210ENST00000506941 URODP06132 367 aa19.68■□□□□ 0.74
NPHP4-210ENST00000506941 CD44P16070 742 aaKnown RBP19.68■□□□□ 0.74
NPHP4-210ENST00000506941 CASP4P49662 377 aa19.68■□□□□ 0.74
NPHP4-210ENST00000506941 TFAMQ00059 246 aaKnown RBP19.68■□□□□ 0.74
NPHP4-210ENST00000506941 NFIL3Q16649 462 aa19.68■□□□□ 0.74
NPHP4-210ENST00000506941 CTC1Q2NKJ3 1217 aa19.68■□□□□ 0.74
NPHP4-210ENST00000506941 C9orf57Q5W0N0 161 aa19.68■□□□□ 0.74
NPHP4-210ENST00000506941 SCARA3Q6AZY7 606 aa19.68■□□□□ 0.74
NPHP4-210ENST00000506941 NT5DC4Q86YG4 428 aa19.68■□□□□ 0.74
NPHP4-210ENST00000506941 ADSSL1Q8N142 457 aa19.68■□□□□ 0.74
NPHP4-210ENST00000506941 VN1R2Q8NFZ6 395 aa19.68■□□□□ 0.74
NPHP4-210ENST00000506941 PPP2R3CQ969Q6 453 aa19.68■□□□□ 0.74
NPHP4-210ENST00000506941 MFSD14AQ96MC6 490 aa19.68■□□□□ 0.74
NPHP4-210ENST00000506941 MRPL17Q9NRX2 175 aaKnown RBP19.68■□□□□ 0.74
NPHP4-210ENST00000506941 DPP3Q9NY33 737 aa19.68■□□□□ 0.74
NPHP4-210ENST00000506941 KIAA1468Q9P260 1216 aa19.68■□□□□ 0.74
NPHP4-210ENST00000506941 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.68■□□□□ 0.74
NPHP4-210ENST00000506941 A0A0C4DFX4 3053 aa19.67■□□□□ 0.74
NPHP4-210ENST00000506941 GOLGA6L22H0YM25 854 aa19.67■□□□□ 0.74
NPHP4-210ENST00000506941 PIRO00625 290 aa19.67■□□□□ 0.74
NPHP4-210ENST00000506941 FGFR3P22607 806 aa19.67■□□□□ 0.74
NPHP4-210ENST00000506941 TKTP29401 623 aaKnown RBP19.67■□□□□ 0.74
NPHP4-210ENST00000506941 LTBRP36941 435 aa19.67■□□□□ 0.74
NPHP4-210ENST00000506941 PMS1P54277 932 aaKnown RBP19.67■□□□□ 0.74
NPHP4-210ENST00000506941 ELAVL2Q12926 359 aaKnown RBP19.67■□□□□ 0.74
NPHP4-210ENST00000506941 PSMD6Q15008 389 aa19.67■□□□□ 0.74
NPHP4-210ENST00000506941 PRSS55Q6UWB4 352 aaPredicted RBP19.67■□□□□ 0.74
NPHP4-210ENST00000506941 EFHBQ8N7U6 833 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms