RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 PAAF1Q9BRP4 392 aa21.58■■□□□ 1.05
SNX25-204ENST00000506896 FAM213AQ9BRX8 229 aa21.58■■□□□ 1.05
SNX25-204ENST00000506896 VN1R3Q9BXE9 311 aa21.58■■□□□ 1.05
SNX25-204ENST00000506896 UBQLN1Q9UMX0 589 aaKnown RBP21.58■■□□□ 1.05
SNX25-204ENST00000506896 SSX2IPQ9Y2D8 614 aa21.58■■□□□ 1.05
SNX25-204ENST00000506896 IRAK3Q9Y616 596 aa21.58■■□□□ 1.05
SNX25-204ENST00000506896 SF3B1O75533 1304 aaKnown RBP eCLIP21.57■■□□□ 1.044e-7■■■■■ 86.2
SNX25-204ENST00000506896 C2orf71A6NGG8 1288 aa21.57■■□□□ 1.04
SNX25-204ENST00000506896 TGFB1I1O43294 461 aa21.57■■□□□ 1.04
SNX25-204ENST00000506896 MBTPS2O43462 519 aa21.57■■□□□ 1.04
SNX25-204ENST00000506896 IL18RAPO95256 599 aa21.57■■□□□ 1.04
SNX25-204ENST00000506896 EFEMP2O95967 443 aa21.57■■□□□ 1.04
SNX25-204ENST00000506896 SOD2P04179 222 aa21.57■■□□□ 1.04
SNX25-204ENST00000506896 CYP3A5P20815 502 aa21.57■■□□□ 1.04
SNX25-204ENST00000506896 NDUFV1P49821 464 aa21.57■■□□□ 1.04
SNX25-204ENST00000506896 NT5DC4Q86YG4 428 aa21.57■■□□□ 1.04
SNX25-204ENST00000506896 C12orf56Q8IXR9 622 aa21.57■■□□□ 1.04
SNX25-204ENST00000506896 RNF168Q8IYW5 571 aaPredicted RBP21.57■■□□□ 1.04
SNX25-204ENST00000506896 SPATA20Q8TB22 786 aa21.57■■□□□ 1.04
SNX25-204ENST00000506896 SMARCE1Q969G3 411 aa21.57■■□□□ 1.04
SNX25-204ENST00000506896 FAM212AQ96EL1 285 aa21.57■■□□□ 1.04
SNX25-204ENST00000506896 KIF12Q96FN5 646 aa21.57■■□□□ 1.04
SNX25-204ENST00000506896 HERC2P3Q9BVR0 1158 aa21.57■■□□□ 1.04
SNX25-204ENST00000506896 CD320Q9NPF0 282 aa21.57■■□□□ 1.04
SNX25-204ENST00000506896 HSPBP1Q9NZL4 362 aa21.57■■□□□ 1.04
SNX25-204ENST00000506896 CD207Q9UJ71 328 aa21.57■■□□□ 1.04
SNX25-204ENST00000506896 C2CD2Q9Y426 696 aa21.57■■□□□ 1.04
SNX25-204ENST00000506896 B3GAT3O94766 335 aa21.56■■□□□ 1.04
SNX25-204ENST00000506896 KIF4AO95239 1232 aa21.56■■□□□ 1.04
SNX25-204ENST00000506896 CXCL14O95715 111 aa21.56■■□□□ 1.04
SNX25-204ENST00000506896 CLCNKBP51801 687 aa21.56■■□□□ 1.04
SNX25-204ENST00000506896 RBM10P98175 930 aaKnown RBP21.56■■□□□ 1.04
SNX25-204ENST00000506896 SOX4Q06945 474 aaPredicted RBP21.56■■□□□ 1.04
SNX25-204ENST00000506896 SMAD2Q15796 467 aaKnown RBP21.56■■□□□ 1.04
SNX25-204ENST00000506896 ZBTB6Q15916 424 aa21.56■■□□□ 1.04
SNX25-204ENST00000506896 FUT10Q6P4F1 479 aa21.56■■□□□ 1.04
SNX25-204ENST00000506896 BRSK2Q8IWQ3 736 aa21.56■■□□□ 1.04
SNX25-204ENST00000506896 SAAL1Q96ER3 474 aa21.56■■□□□ 1.04
SNX25-204ENST00000506896 PCIF1Q9H4Z3 704 aa21.56■■□□□ 1.04
SNX25-204ENST00000506896 CACNG4Q9UBN1 327 aa21.56■■□□□ 1.04
SNX25-204ENST00000506896 PDCD11Q14690 1871 aaKnown RBP21.56■■□□□ 1.04
SNX25-204ENST00000506896 PODXLO00592 558 aa21.55■■□□□ 1.04
SNX25-204ENST00000506896 TRAPPC3O43617 180 aa21.55■■□□□ 1.04
SNX25-204ENST00000506896 URODP06132 367 aa21.55■■□□□ 1.04
SNX25-204ENST00000506896 TMEM132DQ14C87 1099 aa21.55■■□□□ 1.04
SNX25-204ENST00000506896 CLUL1Q15846 466 aa21.55■■□□□ 1.04
SNX25-204ENST00000506896 USP41Q3LFD5 358 aa21.55■■□□□ 1.04
SNX25-204ENST00000506896 GPR65Q8IYL9 337 aa21.55■■□□□ 1.04
SNX25-204ENST00000506896 GUF1Q8N442 669 aaKnown RBP21.55■■□□□ 1.04
SNX25-204ENST00000506896 BEST2Q8NFU1 509 aa21.55■■□□□ 1.04
SNX25-204ENST00000506896 TMEM174Q8WUU8 243 aa21.55■■□□□ 1.04
SNX25-204ENST00000506896 RABGGTAQ92696 567 aa21.55■■□□□ 1.04
SNX25-204ENST00000506896 C18orf25Q96B23 403 aaPredicted RBP21.55■■□□□ 1.04
SNX25-204ENST00000506896 GOLGA2P5Q9HBQ8 144 aa21.55■■□□□ 1.04
SNX25-204ENST00000506896 MRPL17Q9NRX2 175 aaKnown RBP21.55■■□□□ 1.04
SNX25-204ENST00000506896 RBAKQ9NYW8 714 aaPredicted RBP21.55■■□□□ 1.04
SNX25-204ENST00000506896 BARX2Q9UMQ3 279 aaPredicted RBP21.55■■□□□ 1.04
SNX25-204ENST00000506896 FAM50BQ9Y247 325 aa21.55■■□□□ 1.04
SNX25-204ENST00000506896 PCDHA5Q9Y5H7 936 aa21.55■■□□□ 1.04
SNX25-204ENST00000506896 ZNF233A6NK53 670 aa21.54■■□□□ 1.04
SNX25-204ENST00000506896 F8W810 466 aa21.54■■□□□ 1.04
SNX25-204ENST00000506896 GOLGA6L22H0YM25 854 aa21.54■■□□□ 1.04
SNX25-204ENST00000506896 PDXKO00764 312 aa21.54■■□□□ 1.04
SNX25-204ENST00000506896 LRPAP1P30533 357 aa21.54■■□□□ 1.04
SNX25-204ENST00000506896 GLUD2P49448 558 aa21.54■■□□□ 1.04
SNX25-204ENST00000506896 SPAG1Q07617 926 aa21.54■■□□□ 1.04
SNX25-204ENST00000506896 SMAD4Q13485 552 aaKnown RBP21.54■■□□□ 1.04
SNX25-204ENST00000506896 SPATA1Q5VX52 437 aa21.54■■□□□ 1.04
SNX25-204ENST00000506896 JADE1Q6IE81 842 aa21.54■■□□□ 1.04
SNX25-204ENST00000506896 KIAA1841Q6NSI8 718 aa21.54■■□□□ 1.04
SNX25-204ENST00000506896 XXYLT1Q8NBI6 393 aa21.54■■□□□ 1.04
SNX25-204ENST00000506896 SMRP1Q8NCR6 262 aa21.54■■□□□ 1.04
SNX25-204ENST00000506896 FBXL18Q96ME1 805 aa21.54■■□□□ 1.04
SNX25-204ENST00000506896 GPR62Q9BZJ7 368 aa21.54■■□□□ 1.04
SNX25-204ENST00000506896 KCTD10Q9H3F6 313 aa21.54■■□□□ 1.04
SNX25-204ENST00000506896 PRKAG3Q9UGI9 489 aa21.54■■□□□ 1.04
SNX25-204ENST00000506896 TUBGCP4Q9UGJ1 667 aa21.54■■□□□ 1.04
SNX25-204ENST00000506896 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.53■■□□□ 1.04
SNX25-204ENST00000506896 GOLGA8IPA6NC78 632 aa21.53■■□□□ 1.04
SNX25-204ENST00000506896 GOLGA8JA6NMD2 632 aa21.53■■□□□ 1.04
SNX25-204ENST00000506896 LILRB3O75022 631 aa21.53■■□□□ 1.04
SNX25-204ENST00000506896 CLASP2O75122 1294 aaKnown RBP21.53■■□□□ 1.04
SNX25-204ENST00000506896 NFICP08651 508 aa21.53■■□□□ 1.04
SNX25-204ENST00000506896 CA8P35219 290 aa21.53■■□□□ 1.04
SNX25-204ENST00000506896 DSG1Q02413 1049 aa21.53■■□□□ 1.04
SNX25-204ENST00000506896 MYBPC2Q14324 1141 aa21.53■■□□□ 1.04
SNX25-204ENST00000506896 SURF1Q15526 300 aa21.53■■□□□ 1.04
SNX25-204ENST00000506896 PTPN14Q15678 1187 aa21.53■■□□□ 1.04
SNX25-204ENST00000506896 ZNF658Q5TYW1 1059 aaPredicted RBP21.53■■□□□ 1.04
SNX25-204ENST00000506896 SLC9A9Q8IVB4 645 aa21.53■■□□□ 1.04
SNX25-204ENST00000506896 HASPINQ8TF76 798 aa21.53■■□□□ 1.04
SNX25-204ENST00000506896 NOC3LQ8WTT2 800 aaKnown RBP21.53■■□□□ 1.04
SNX25-204ENST00000506896 AUTS2Q8WXX7 1259 aa21.53■■□□□ 1.04
SNX25-204ENST00000506896 CHST7Q9NS84 486 aa21.53■■□□□ 1.04
SNX25-204ENST00000506896 C19orf67A6NJJ6 358 aa21.52■■□□□ 1.04
SNX25-204ENST00000506896 CLIC2O15247 247 aa21.52■■□□□ 1.04
SNX25-204ENST00000506896 CALUO43852 315 aaPredicted RBP21.52■■□□□ 1.04
SNX25-204ENST00000506896 CYP2J2P51589 502 aa21.52■■□□□ 1.04
SNX25-204ENST00000506896 CREMQ03060 361 aa21.52■■□□□ 1.04
SNX25-204ENST00000506896 SNRNP35Q16560 246 aaKnown RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms