RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 FAN1Q9Y2M0 1017 aa13.91□□□□□ -0.18
TCOF1-210ENST00000506767 PCDHB12Q9Y5F1 795 aa13.91□□□□□ -0.18
TCOF1-210ENST00000506767 ANO9A1A5B4 782 aa13.9□□□□□ -0.18
TCOF1-210ENST00000506767 CASTOR2A6NHX0 329 aa13.9□□□□□ -0.18
TCOF1-210ENST00000506767 LRRIQ3A6PVS8 624 aaPredicted RBP13.9□□□□□ -0.18
TCOF1-210ENST00000506767 NT5C1B-RDH14C9J2C7 533 aa13.9□□□□□ -0.18
TCOF1-210ENST00000506767 TMEM189-UBE2V1I3L0A0 370 aa13.9□□□□□ -0.18
TCOF1-210ENST00000506767 IKBKBO14920 756 aa13.9□□□□□ -0.18
TCOF1-210ENST00000506767 FGFR1OPO95684 399 aaKnown RBP13.9□□□□□ -0.18
TCOF1-210ENST00000506767 CTNNB1P35222 781 aa13.9□□□□□ -0.18
TCOF1-210ENST00000506767 OR1G1P47890 313 aa13.9□□□□□ -0.18
TCOF1-210ENST00000506767 CLCNKBP51801 687 aa13.9□□□□□ -0.18
TCOF1-210ENST00000506767 VAMP7P51809 220 aa13.9□□□□□ -0.18
TCOF1-210ENST00000506767 DLG4P78352 724 aa13.9□□□□□ -0.18
TCOF1-210ENST00000506767 PLCB3Q01970 1234 aa13.9□□□□□ -0.18
TCOF1-210ENST00000506767 BFSP1Q12934 665 aa13.9□□□□□ -0.18
TCOF1-210ENST00000506767 ANO6Q4KMQ2 910 aa13.9□□□□□ -0.18
TCOF1-210ENST00000506767 CD300LGQ6UXG3 332 aa13.9□□□□□ -0.18
TCOF1-210ENST00000506767 FRMD5Q7Z6J6 570 aa13.9□□□□□ -0.18
TCOF1-210ENST00000506767 TMEM173Q86WV6 379 aaPredicted RBP13.9□□□□□ -0.18
TCOF1-210ENST00000506767 IRF2BP1Q8IU81 584 aa13.9□□□□□ -0.18
TCOF1-210ENST00000506767 KLHL23Q8NBE8 558 aa13.9□□□□□ -0.18
TCOF1-210ENST00000506767 BEST2Q8NFU1 509 aa13.9□□□□□ -0.18
TCOF1-210ENST00000506767 OR5B17Q8NGF7 314 aa13.9□□□□□ -0.18
TCOF1-210ENST00000506767 CACTINQ8WUQ7 758 aaKnown RBP13.9□□□□□ -0.18
TCOF1-210ENST00000506767 BCL7CQ8WUZ0 217 aaPredicted RBP13.9□□□□□ -0.18
TCOF1-210ENST00000506767 CCDC127Q96BQ5 260 aa13.9□□□□□ -0.18
TCOF1-210ENST00000506767 IGSF21Q96ID5 467 aa13.9□□□□□ -0.18
TCOF1-210ENST00000506767 FNBP1Q96RU3 617 aa13.9□□□□□ -0.18
TCOF1-210ENST00000506767 BPIFA3Q9BQP9 254 aa13.9□□□□□ -0.18
TCOF1-210ENST00000506767 COLEC11Q9BWP8 271 aa13.9□□□□□ -0.18
TCOF1-210ENST00000506767 METTL14Q9HCE5 456 aaKnown RBP13.9□□□□□ -0.18
TCOF1-210ENST00000506767 MARCH5Q9NX47 278 aa13.9□□□□□ -0.18
TCOF1-210ENST00000506767 DPP3Q9NY33 737 aa13.9□□□□□ -0.18
TCOF1-210ENST00000506767 SPG21Q9NZD8 308 aa13.9□□□□□ -0.18
TCOF1-210ENST00000506767 PLXNA4Q9HCM2 1894 aa13.89□□□□□ -0.19
TCOF1-210ENST00000506767 EPOPA6NHQ4 379 aa13.89□□□□□ -0.19
TCOF1-210ENST00000506767 H3BNC9 293 aa13.89□□□□□ -0.19
TCOF1-210ENST00000506767 PIRO00625 290 aa13.89□□□□□ -0.19
TCOF1-210ENST00000506767 GNA14O95837 355 aa13.89□□□□□ -0.19
TCOF1-210ENST00000506767 ITGB1P05556 798 aa13.89□□□□□ -0.19
TCOF1-210ENST00000506767 DLATP10515 647 aaKnown RBP13.89□□□□□ -0.19
TCOF1-210ENST00000506767 KRT13P13646 458 aa13.89□□□□□ -0.19
TCOF1-210ENST00000506767 TNNI1P19237 187 aa13.89□□□□□ -0.19
TCOF1-210ENST00000506767 IGFBP6P24592 240 aaPredicted RBP13.89□□□□□ -0.19
TCOF1-210ENST00000506767 PPM1AP35813 382 aa13.89□□□□□ -0.19
TCOF1-210ENST00000506767 GUCY2FP51841 1108 aa13.89□□□□□ -0.19
TCOF1-210ENST00000506767 AP3M2P53677 418 aa13.89□□□□□ -0.19
TCOF1-210ENST00000506767 TFAMQ00059 246 aaKnown RBP13.89□□□□□ -0.19
TCOF1-210ENST00000506767 DUOXA2Q1HG44 320 aa13.89□□□□□ -0.19
TCOF1-210ENST00000506767 LMBRD2Q68DH5 695 aaPredicted RBP13.89□□□□□ -0.19
TCOF1-210ENST00000506767 DCLRE1AQ6PJP8 1040 aa13.89□□□□□ -0.19
TCOF1-210ENST00000506767 USP37Q86T82 979 aa13.89□□□□□ -0.19
TCOF1-210ENST00000506767 RNF168Q8IYW5 571 aaPredicted RBP13.89□□□□□ -0.19
TCOF1-210ENST00000506767 C1orf127Q8N9H9 656 aa13.89□□□□□ -0.19
TCOF1-210ENST00000506767 C3orf58Q8NDZ4 430 aa13.89□□□□□ -0.19
TCOF1-210ENST00000506767 FBXO22Q8NEZ5 403 aa13.89□□□□□ -0.19
TCOF1-210ENST00000506767 RABGGTAQ92696 567 aa13.89□□□□□ -0.19
TCOF1-210ENST00000506767 ANKRD36BP1Q96IX9 119 aa13.89□□□□□ -0.19
TCOF1-210ENST00000506767 FAM84AQ96KN4 292 aa13.89□□□□□ -0.19
TCOF1-210ENST00000506767 MTMR12Q9C0I1 747 aa13.89□□□□□ -0.19
TCOF1-210ENST00000506767 THAP9Q9H5L6 903 aa13.89□□□□□ -0.19
TCOF1-210ENST00000506767 CERS4Q9HA82 394 aa13.89□□□□□ -0.19
TCOF1-210ENST00000506767 MTMR10Q9NXD2 777 aa13.89□□□□□ -0.19
TCOF1-210ENST00000506767 MTUS1Q9ULD2 1270 aa13.89□□□□□ -0.19
TCOF1-210ENST00000506767 LAMA2P24043 3122 aaKnown RBP13.88□□□□□ -0.19
TCOF1-210ENST00000506767 F8W810 466 aa13.88□□□□□ -0.19
TCOF1-210ENST00000506767 PODXLO00592 558 aa13.88□□□□□ -0.19
TCOF1-210ENST00000506767 FGF18O76093 207 aa13.88□□□□□ -0.19
TCOF1-210ENST00000506767 KIF4AO95239 1232 aa13.88□□□□□ -0.19
TCOF1-210ENST00000506767 C4BPAP04003 597 aaKnown RBP13.88□□□□□ -0.19
TCOF1-210ENST00000506767 TMEM191BP0C7N4 346 aa13.88□□□□□ -0.19
TCOF1-210ENST00000506767 NCAPHQ15003 741 aa13.88□□□□□ -0.19
TCOF1-210ENST00000506767 C9orf57Q5W0N0 161 aa13.88□□□□□ -0.19
TCOF1-210ENST00000506767 SCARA3Q6AZY7 606 aa13.88□□□□□ -0.19
TCOF1-210ENST00000506767 C15orf39Q6ZRI6 1047 aa13.88□□□□□ -0.19
TCOF1-210ENST00000506767 TRAPPC11Q7Z392 1133 aa13.88□□□□□ -0.19
TCOF1-210ENST00000506767 SPPL3Q8TCT6 385 aa13.88□□□□□ -0.19
TCOF1-210ENST00000506767 ARNTL2Q8WYA1 636 aa13.88□□□□□ -0.19
TCOF1-210ENST00000506767 SLC35C1Q96A29 364 aa13.88□□□□□ -0.19
TCOF1-210ENST00000506767 C11orf84Q9BUA3 381 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-210ENST00000506767 NAT10Q9H0A0 1025 aaKnown RBP13.88□□□□□ -0.19
TCOF1-210ENST00000506767 ARMCX3Q9UH62 379 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-210ENST00000506767 SIX4Q9UIU6 781 aa13.88□□□□□ -0.19
TCOF1-210ENST00000506767 ADAM28Q9UKQ2 775 aa13.88□□□□□ -0.19
TCOF1-210ENST00000506767 ITGA11Q9UKX5 1188 aa13.88□□□□□ -0.19
TCOF1-210ENST00000506767 LZTS1Q9Y250 596 aa13.88□□□□□ -0.19
TCOF1-210ENST00000506767 PRG3Q9Y2Y8 225 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-210ENST00000506767 NFE2L3Q9Y4A8 694 aa13.88□□□□□ -0.19
TCOF1-210ENST00000506767 PPEF2O14830 753 aa13.87□□□□□ -0.19
TCOF1-210ENST00000506767 LPXNO60711 386 aa13.87□□□□□ -0.19
TCOF1-210ENST00000506767 B3GAT3O94766 335 aa13.87□□□□□ -0.19
TCOF1-210ENST00000506767 TNNC2P02585 160 aa13.87□□□□□ -0.19
TCOF1-210ENST00000506767 ITGB3P05106 788 aa13.87□□□□□ -0.19
TCOF1-210ENST00000506767 TRIM49P0CI25 452 aa13.87□□□□□ -0.19
TCOF1-210ENST00000506767 TRIM49CP0CI26 452 aa13.87□□□□□ -0.19
TCOF1-210ENST00000506767 GTF2H1P32780 548 aa13.87□□□□□ -0.19
TCOF1-210ENST00000506767 UBE3AQ05086 875 aa13.87□□□□□ -0.19
TCOF1-210ENST00000506767 PPP3CAQ08209 521 aa13.87□□□□□ -0.19
TCOF1-210ENST00000506767 GPM6BQ13491 265 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms