RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 MAGEA13PA6NCF6 341 aa18.17■□□□□ 0.5
SQSTM1-211ENST00000506690 FAM196BA6NMK8 535 aa18.17■□□□□ 0.5
SQSTM1-211ENST00000506690 MEIS2O14770 477 aa18.17■□□□□ 0.5
SQSTM1-211ENST00000506690 EXOC3O60645 756 aa18.17■□□□□ 0.5
SQSTM1-211ENST00000506690 KCNA3P22001 575 aa18.17■□□□□ 0.5
SQSTM1-211ENST00000506690 SLC34A1Q06495 639 aa18.17■□□□□ 0.5
SQSTM1-211ENST00000506690 GABPAQ06546 454 aa18.17■□□□□ 0.5
SQSTM1-211ENST00000506690 AP3B2Q13367 1082 aa18.17■□□□□ 0.5
SQSTM1-211ENST00000506690 ACSBG2Q5FVE4 666 aa18.17■□□□□ 0.5
SQSTM1-211ENST00000506690 LRRC74BQ6ZQY2 392 aa18.17■□□□□ 0.5
SQSTM1-211ENST00000506690 C1orf186Q6ZWK4 172 aa18.17■□□□□ 0.5
SQSTM1-211ENST00000506690 MTDHQ86UE4 582 aaKnown RBP18.17■□□□□ 0.5
SQSTM1-211ENST00000506690 SESTD1Q86VW0 696 aa18.17■□□□□ 0.5
SQSTM1-211ENST00000506690 KCTD17Q8N5Z5 321 aa18.17■□□□□ 0.5
SQSTM1-211ENST00000506690 FAM20AQ96MK3 541 aa18.17■□□□□ 0.5
SQSTM1-211ENST00000506690 FAM192AQ9GZU8 254 aa18.17■□□□□ 0.5
SQSTM1-211ENST00000506690 PARVGQ9HBI0 331 aa18.17■□□□□ 0.5
SQSTM1-211ENST00000506690 IRAK4Q9NWZ3 460 aa18.17■□□□□ 0.5
SQSTM1-211ENST00000506690 CCDC22O60826 627 aa18.16■□□□□ 0.5
SQSTM1-211ENST00000506690 RPA3P35244 121 aaPredicted RBP18.16■□□□□ 0.5
SQSTM1-211ENST00000506690 DYNC1I2Q13409 638 aaKnown RBP18.16■□□□□ 0.5
SQSTM1-211ENST00000506690 DPP8Q6V1X1 898 aaPredicted RBP18.16■□□□□ 0.5
SQSTM1-211ENST00000506690 ARHGAP22Q7Z5H3 698 aa18.16■□□□□ 0.5
SQSTM1-211ENST00000506690 SLC9A9Q8IVB4 645 aa18.16■□□□□ 0.5
SQSTM1-211ENST00000506690 BBOF1Q8ND07 529 aa18.16■□□□□ 0.5
SQSTM1-211ENST00000506690 FAM210AQ96ND0 272 aa18.16■□□□□ 0.5
SQSTM1-211ENST00000506690 EIF2AK1Q9BQI3 630 aaKnown RBP18.16■□□□□ 0.5
SQSTM1-211ENST00000506690 BTBD10Q9BSF8 475 aa18.16■□□□□ 0.5
SQSTM1-211ENST00000506690 ZNF831Q5JPB2 1677 aa18.16■□□□□ 0.5
SQSTM1-211ENST00000506690 EXOC1LA0A1B0GW35 172 aa18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 FAM86B1E9PN63 330 aa18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 KRT36O76013 467 aa18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 FAM86B2P0C5J1 330 aa18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 FGFR1P11362 822 aa18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 MAGEA4P43358 317 aa18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 VPS41P49754 854 aa18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 SLC1A5Q15758 541 aa18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 PLEKHG4Q58EX7 1191 aa18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 FAM43BQ6ZT52 329 aaPredicted RBP18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 KCTD1Q719H9 257 aa18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 B4GALNT2Q8NHY0 566 aa18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 ZNF653Q96CK0 615 aa18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 SENP1Q9P0U3 644 aa18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 FOCADQ5VW36 1801 aa18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 COL24A1Q17RW2 1714 aa18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 CAPN9O14815 690 aa18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 GSC2O15499 205 aa18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 TBX10O75333 385 aa18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 TM4SF1P30408 202 aa18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 AP1B1Q10567 949 aa18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 ZC3H18Q86VM9 953 aaKnown RBP18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 AZIN2Q96A70 460 aa18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 PTCD3Q96EY7 689 aaKnown RBP18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 PCDHA1Q9Y5I3 950 aa18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 COL5A3P25940 1745 aaPredicted RBP18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 CNTNAP4Q9C0A0 1308 aa18.15■□□□□ 0.5
SQSTM1-211ENST00000506690 TYROBPO43914 113 aa18.14■□□□□ 0.5
SQSTM1-211ENST00000506690 ZWINTO95229 277 aa18.14■□□□□ 0.5
SQSTM1-211ENST00000506690 PSMG1O95456 288 aa18.14■□□□□ 0.5
SQSTM1-211ENST00000506690 DLG4P78352 724 aa18.14■□□□□ 0.5
SQSTM1-211ENST00000506690 FMO1Q01740 532 aa18.14■□□□□ 0.5
SQSTM1-211ENST00000506690 KPNB1Q14974 876 aaKnown RBP18.14■□□□□ 0.5
SQSTM1-211ENST00000506690 PKN2Q16513 984 aaKnown RBP18.14■□□□□ 0.5
SQSTM1-211ENST00000506690 QRICH1Q2TAL8 776 aa18.14■□□□□ 0.5
SQSTM1-211ENST00000506690 EPC2Q52LR7 807 aa18.14■□□□□ 0.5
SQSTM1-211ENST00000506690 FAM71AQ8IYT1 594 aa18.14■□□□□ 0.5
SQSTM1-211ENST00000506690 LARGE2Q8N3Y3 721 aa18.14■□□□□ 0.5
SQSTM1-211ENST00000506690 ZNF75CPQ92670 426 aaPredicted RBP18.14■□□□□ 0.5
SQSTM1-211ENST00000506690 PTPRN2Q92932 1015 aa18.14■□□□□ 0.5
SQSTM1-211ENST00000506690 CFAP57Q96MR6 1250 aa18.14■□□□□ 0.5
SQSTM1-211ENST00000506690 SMC6Q96SB8 1091 aa18.14■□□□□ 0.5
SQSTM1-211ENST00000506690 RBM15Q96T37 977 aaKnown RBP eCLIP18.14■□□□□ 0.5
SQSTM1-211ENST00000506690 PPP1R12CQ9BZL4 782 aa18.14■□□□□ 0.5
SQSTM1-211ENST00000506690 PDP2Q9P2J9 529 aa18.14■□□□□ 0.5
SQSTM1-211ENST00000506690 STX18Q9P2W9 335 aaKnown RBP18.14■□□□□ 0.5
SQSTM1-211ENST00000506690 SEL1LQ9UBV2 794 aa18.14■□□□□ 0.5
SQSTM1-211ENST00000506690 CCNL1Q9UK58 526 aaPredicted RBP18.14■□□□□ 0.5
SQSTM1-211ENST00000506690 R3HDM2Q9Y2K5 976 aaKnown RBP18.14■□□□□ 0.5
SQSTM1-211ENST00000506690 EMSYQ7Z589 1322 aa18.14■□□□□ 0.49
SQSTM1-211ENST00000506690 ZNFX1Q9P2E3 1918 aaKnown RBP18.14■□□□□ 0.49
SQSTM1-211ENST00000506690 GSTTP1A0A1W2PQM5 241 aa18.14■□□□□ 0.49
SQSTM1-211ENST00000506690 EML1O00423 815 aa18.14■□□□□ 0.49
SQSTM1-211ENST00000506690 PLSCR1O15162 318 aa18.14■□□□□ 0.49
SQSTM1-211ENST00000506690 GNPATO15228 680 aa18.14■□□□□ 0.49
SQSTM1-211ENST00000506690 MSH4O15457 936 aa18.14■□□□□ 0.49
SQSTM1-211ENST00000506690 CENPCQ03188 943 aa18.14■□□□□ 0.49
SQSTM1-211ENST00000506690 ZRSR2Q15696 482 aaKnown RBP18.14■□□□□ 0.49
SQSTM1-211ENST00000506690 IZUMO3Q5VZ72 239 aa18.14■□□□□ 0.49
SQSTM1-211ENST00000506690 CYP4F22Q6NT55 531 aa18.14■□□□□ 0.49
SQSTM1-211ENST00000506690 NSMFQ6X4W1 530 aa18.14■□□□□ 0.49
SQSTM1-211ENST00000506690 ZCCHC9Q8N567 271 aaKnown RBP18.14■□□□□ 0.49
SQSTM1-211ENST00000506690 CCDC89Q8N998 374 aa18.14■□□□□ 0.49
SQSTM1-211ENST00000506690 KAT5Q92993 513 aa18.14■□□□□ 0.49
SQSTM1-211ENST00000506690 RBM41Q96IZ5 413 aaKnown RBP18.14■□□□□ 0.49
SQSTM1-211ENST00000506690 FOXP3Q9BZS1 431 aa18.14■□□□□ 0.49
SQSTM1-211ENST00000506690 ZCWPW1Q9H0M4 648 aa18.14■□□□□ 0.49
SQSTM1-211ENST00000506690 KANSL3Q9P2N6 904 aa18.14■□□□□ 0.49
SQSTM1-211ENST00000506690 P4HA2O15460 535 aa18.13■□□□□ 0.49
SQSTM1-211ENST00000506690 CA4P22748 312 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms