RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 HSP90AA2PQ14568 343 aaPredicted RBP7.91□□□□□ -1.14
GYPB-206ENST00000506516 SMC1AQ14683 1233 aaKnown RBP7.91□□□□□ -1.14
GYPB-206ENST00000506516 SLC10A6Q3KNW5 377 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 MSS51Q4VC12 460 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 SEZ6Q53EL9 994 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 XKR4Q5GH76 650 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 TCEAL5Q5H9L2 206 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 GRAMD1CQ8IYS0 662 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 FMR1NBQ8N0W7 255 aaPredicted RBP7.91□□□□□ -1.14
GYPB-206ENST00000506516 CEP120Q8N960 986 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 TIGD1Q96MW7 591 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 TSPAN18Q96SJ8 248 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 TCF25Q9BQ70 676 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 TLE6Q9H808 572 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 RPF1Q9H9Y2 349 aaKnown RBP7.91□□□□□ -1.14
GYPB-206ENST00000506516 IL21Q9HBE4 155 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 ENTPD7Q9NQZ7 604 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 EXOC1Q9NV70 894 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 COG5Q9UP83 839 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 PRG3Q9Y2Y8 225 aaPredicted RBP7.91□□□□□ -1.14
GYPB-206ENST00000506516 STYXL1Q9Y6J8 313 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 MYH15Q9Y2K3 1946 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 UBE4BO95155 1302 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 CASTOR2A6NHX0 329 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 TRAPPC3O43617 180 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 CTSAP10619 480 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 RPL9P32969 192 aaKnown RBP7.9□□□□□ -1.14
GYPB-206ENST00000506516 IRS1P35568 1242 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 ACOT2P49753 483 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 CASP5P51878 434 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 ERVFC1P60507 584 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 PPP2R3AQ06190 1150 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 EHHADHQ08426 723 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 KCNA1Q09470 495 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 ELAVL2Q12926 359 aaKnown RBP7.9□□□□□ -1.14
GYPB-206ENST00000506516 AAK1Q2M2I8 961 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 TJAP1Q5JTD0 557 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 GLRA4Q5JXX5 417 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 PLPP4Q5VZY2 271 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 KIAA1841Q6NSI8 718 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 ARMCX5Q6P1M9 558 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 SLC39A4Q6P5W5 647 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 DCLRE1AQ6PJP8 1040 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 LYPD8Q6UX82 237 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 EPM2AIP1Q7L775 607 aaPredicted RBP7.9□□□□□ -1.14
GYPB-206ENST00000506516 HS2ST1Q7LGA3 356 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 VPS52Q8N1B4 723 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 MRPL43Q8N983 215 aaKnown RBP7.9□□□□□ -1.14
GYPB-206ENST00000506516 HPS3Q969F9 1004 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 SNX27Q96L92 541 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 PPP1R10Q96QC0 940 aaKnown RBP7.9□□□□□ -1.14
GYPB-206ENST00000506516 CDCA3Q99618 268 aaPredicted RBP7.9□□□□□ -1.14
GYPB-206ENST00000506516 HAPLN2Q9GZV7 340 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 GOLPH3LQ9H4A5 285 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 IGFLR1Q9H665 355 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 KIAA1586Q9HCI6 787 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 SLC39A2Q9NP94 309 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 MRPL17Q9NRX2 175 aaKnown RBP7.9□□□□□ -1.14
GYPB-206ENST00000506516 RMND1Q9NWS8 449 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 CNTN3Q9P232 1028 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 CGNQ9P2M7 1197 aaKnown RBP7.9□□□□□ -1.14
GYPB-206ENST00000506516 CPSF3Q9UKF6 684 aaKnown RBP7.9□□□□□ -1.14
GYPB-206ENST00000506516 ADAM28Q9UKQ2 775 aa7.9□□□□□ -1.14
GYPB-206ENST00000506516 COL6A3P12111 3177 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 TTC26A0AVF1 554 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 LACTBL1A8MY62 500 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 FSCN2O14926 492 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 KLRC4O43908 158 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 B4GALT3O60512 393 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 KINO60870 393 aaKnown RBP7.89□□□□□ -1.15
GYPB-206ENST00000506516 PRPF40AO75400 957 aaKnown RBP7.89□□□□□ -1.15
GYPB-206ENST00000506516 B3GAT3O94766 335 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 SMC2O95347 1197 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 ADH1BP00325 375 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 SOD2P04179 222 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 ADRB2P07550 413 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 SRGAP2BP0DMP2 458 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 CXCL8P10145 99 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 CYP3A5P20815 502 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 ADSSP30520 456 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 TNFSF9P41273 254 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 NRIP1P48552 1158 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 CLCNKBP51801 687 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 UBE2HP62256 183 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 DPYDQ12882 1025 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 STK4Q13043 487 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 SNW1Q13573 536 aaKnown RBP7.89□□□□□ -1.15
GYPB-206ENST00000506516 KCNB1Q14721 858 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 NAB2Q15742 525 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 ENOX2Q16206 610 aaKnown RBP7.89□□□□□ -1.15
GYPB-206ENST00000506516 UPP1Q16831 310 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 KNOP1Q1ED39 458 aaKnown RBP7.89□□□□□ -1.15
GYPB-206ENST00000506516 BMT2Q1RMZ1 405 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 USP41Q3LFD5 358 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 EP400NLQ6ZTU2 488 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 RBM23Q86U06 439 aaKnown RBP7.89□□□□□ -1.15
GYPB-206ENST00000506516 PPFIBP1Q86W92 1011 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 TMEM173Q86WV6 379 aaPredicted RBP7.89□□□□□ -1.15
GYPB-206ENST00000506516 NELFCDQ8IXH7 590 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 ELOA2Q8IYF1 753 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms