RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 PRR23BQ6ZRT6 265 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 Q6ZUG5 572 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 LARP4Q71RC2 724 aaKnown RBP eCLIP3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 SESTD1Q86VW0 696 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 REXO1L1PQ8IX06 675 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 TRMT2AQ8IZ69 625 aaKnown RBP3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 NKAPQ8N5F7 415 aaKnown RBP3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 LILRA3Q8N6C8 439 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 SPATA5Q8NB90 893 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 NUDT10Q8NFP7 164 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 KBTBD7Q8WVZ9 684 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 TRIM63Q969Q1 353 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 KIAA1191Q96A73 305 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 ARL8AQ96BM9 186 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 SLC7A6OSQ96CW6 309 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 NUDT11Q96G61 164 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 AJUBAQ96IF1 538 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 MSLNLQ96KJ4 702 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 MRGPRX1Q96LB2 322 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 CDC5LQ99459 802 aaKnown RBP3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 COLEC11Q9BWP8 271 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 SGPP1Q9BX95 441 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 MRPL46Q9H2W6 279 aaKnown RBP3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 SIDT1Q9NXL6 827 aaKnown RBP3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 MOCS1Q9NZB8 636 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 CPNE7Q9UBL6 633 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 CDC23Q9UJX2 597 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 CEP83Q9Y592 693 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 CTDP1Q9Y5B0 961 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 ERICH3Q5RHP9 1530 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 F2RL2O00254 374 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 NRP1O14786 923 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 APOL1O14791 398 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 ADAMTS3O15072 1205 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 TOX4O94842 621 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 JUNP05412 331 aaKnown RBP3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 VSIG10L2P0DP72 767 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 MTHFD1P11586 935 aaKnown RBP3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 TSHRP16473 764 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 ZNF28P17035 718 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 PCSK1P29120 753 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 CHKAP35790 457 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 GRK6P43250 576 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 KCNJ5P48544 419 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 PIK3CGP48736 1102 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 SOX8P57073 446 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 CREMQ03060 361 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 ICA1Q05084 483 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 MESP2Q0VG99 397 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 SP140Q13342 867 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 BIRC3Q13489 604 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 ZNF827Q17R98 1081 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 FAM47AQ5JRC9 791 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 EMC10Q5UCC4 262 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 KRT40Q6A162 431 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 CCDC174Q6PII3 467 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 TMED8Q6PL24 325 aaPredicted RBP3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 LCNL1Q6ZST4 164 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 SYDE1Q6ZW31 735 aaPredicted RBP3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 PPP1R3BQ86XI6 285 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 FAM90A1Q86YD7 464 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 LIX1LQ8IVB5 337 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 SYTL1Q8IYJ3 562 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 PAF1Q8N7H5 531 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 RNF152Q8N8N0 203 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 REPS2Q8NFH8 660 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 OR6B3Q8NGW1 331 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 TNPO1Q92973 898 aaKnown RBP3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 TMEM41AQ96HV5 264 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 MAF1Q9H063 256 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 KATNBL1Q9H079 304 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 TMEM168Q9H0V1 697 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 OR10A2Q9H208 303 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 SLC6A15Q9H2J7 730 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 BARX1Q9HBU1 254 aaPredicted RBP3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 SERHLQ9NQF3 203 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 SACM1LQ9NTJ5 587 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 ZDHHC8Q9ULC8 765 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 MAGED2Q9UNF1 606 aaPredicted RBP3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 PCDHGB2Q9Y5G2 931 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 ACTL7AQ9Y615 435 aa3.88□□□□□ -1.79
TRAPPC11-205ENST00000506426 A0A087WV62 115 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 TBC1D4O60343 1298 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 AHSGP02765 367 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 PLA2G1BP04054 148 aaKnown RBP3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 CYP1A1P04798 512 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 CD1AP06126 327 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 THP07101 528 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 GNAI3P08754 354 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 HDCP19113 662 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 FPR1P21462 350 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 CFPP27918 469 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 BUD31P41223 144 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 CCT5P48643 541 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 SARSP49591 514 aaKnown RBP3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 ARFIP2P53365 341 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 RRADP55042 308 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 BPIFB4P59827 614 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 GNAI1P63096 354 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms