RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 VARS2Q5ST30 1063 aaKnown RBP15.72■□□□□ 0.11
CDC42SE2-209ENST00000506419 POTEHQ6S545 545 aa15.72■□□□□ 0.11
CDC42SE2-209ENST00000506419 ANKS3Q6ZW76 656 aa15.72■□□□□ 0.11
CDC42SE2-209ENST00000506419 ITFG1Q8TB96 612 aa15.72■□□□□ 0.11
CDC42SE2-209ENST00000506419 SLC7A14Q8TBB6 771 aa15.72■□□□□ 0.11
CDC42SE2-209ENST00000506419 CLIC6Q96NY7 704 aa15.72■□□□□ 0.11
CDC42SE2-209ENST00000506419 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.72■□□□□ 0.11
CDC42SE2-209ENST00000506419 FBXO2Q9UK22 296 aaPredicted RBP15.72■□□□□ 0.11
CDC42SE2-209ENST00000506419 DUSP12Q9UNI6 340 aa15.72■□□□□ 0.11
CDC42SE2-209ENST00000506419 C2orf16Q68DN1 1984 aa15.71■□□□□ 0.11
CDC42SE2-209ENST00000506419 TTC26A0AVF1 554 aa15.71■□□□□ 0.11
CDC42SE2-209ENST00000506419 LACTBL1A8MY62 500 aa15.71■□□□□ 0.11
CDC42SE2-209ENST00000506419 TRAK2O60296 914 aa15.71■□□□□ 0.11
CDC42SE2-209ENST00000506419 ABLIM3O94929 683 aa15.71■□□□□ 0.11
CDC42SE2-209ENST00000506419 PIGRP01833 764 aa15.71■□□□□ 0.11
CDC42SE2-209ENST00000506419 CLTAP09496 248 aa15.71■□□□□ 0.11
CDC42SE2-209ENST00000506419 NMT1P30419 496 aaKnown RBP15.71■□□□□ 0.11
CDC42SE2-209ENST00000506419 MRE11P49959 708 aa15.71■□□□□ 0.11
CDC42SE2-209ENST00000506419 PTPN5P54829 565 aa15.71■□□□□ 0.11
CDC42SE2-209ENST00000506419 LIN9Q5TKA1 542 aa15.71■□□□□ 0.11
CDC42SE2-209ENST00000506419 ASTLQ6HA08 431 aaPredicted RBP15.71■□□□□ 0.11
CDC42SE2-209ENST00000506419 SLC8B1Q6J4K2 584 aa15.71■□□□□ 0.11
CDC42SE2-209ENST00000506419 SLC39A4Q6P5W5 647 aa15.71■□□□□ 0.11
CDC42SE2-209ENST00000506419 GET4Q7L5D6 327 aaPredicted RBP15.71■□□□□ 0.11
CDC42SE2-209ENST00000506419 PRRX2Q99811 253 aa15.71■□□□□ 0.11
CDC42SE2-209ENST00000506419 PLEKHA5Q9HAU0 1116 aa15.71■□□□□ 0.11
CDC42SE2-209ENST00000506419 PARVGQ9HBI0 331 aa15.71■□□□□ 0.11
CDC42SE2-209ENST00000506419 FOXD4L1Q9NU39 408 aa15.71■□□□□ 0.11
CDC42SE2-209ENST00000506419 HCFC1R1Q9NWW0 138 aa15.71■□□□□ 0.11
CDC42SE2-209ENST00000506419 DNMT3BQ9UBC3 853 aaKnown RBP15.71■□□□□ 0.11
CDC42SE2-209ENST00000506419 TUBGCP4Q9UGJ1 667 aa15.71■□□□□ 0.11
CDC42SE2-209ENST00000506419 MTMR6Q9Y217 621 aa15.71■□□□□ 0.11
CDC42SE2-209ENST00000506419 SRPRBQ9Y5M8 271 aaKnown RBP15.71■□□□□ 0.11
CDC42SE2-209ENST00000506419 USP34Q70CQ2 3546 aa15.71■□□□□ 0.1
CDC42SE2-209ENST00000506419 MYO15AQ9UKN7 3530 aa15.71■□□□□ 0.1
CDC42SE2-209ENST00000506419 ANKRD63C9JTQ0 380 aa15.7■□□□□ 0.1
CDC42SE2-209ENST00000506419 FAM13AO94988 1023 aa15.7■□□□□ 0.1
CDC42SE2-209ENST00000506419 ADRB2P07550 413 aa15.7■□□□□ 0.1
CDC42SE2-209ENST00000506419 PDCP20941 246 aa15.7■□□□□ 0.1
CDC42SE2-209ENST00000506419 HOXA9P31269 272 aa15.7■□□□□ 0.1
CDC42SE2-209ENST00000506419 MATR3P43243 847 aaKnown RBP eCLIP15.7■□□□□ 0.17e-6■■■□□ 17.4
CDC42SE2-209ENST00000506419 GUCY2FP51841 1108 aa15.7■□□□□ 0.1
CDC42SE2-209ENST00000506419 GTF2BQ00403 316 aa15.7■□□□□ 0.1
CDC42SE2-209ENST00000506419 ROR1Q01973 937 aa15.7■□□□□ 0.1
CDC42SE2-209ENST00000506419 CEBPZQ03701 1054 aaKnown RBP15.7■□□□□ 0.1
CDC42SE2-209ENST00000506419 ZC2HC1CQ53FD0 456 aaPredicted RBP15.7■□□□□ 0.1
CDC42SE2-209ENST00000506419 ZNF461Q8TAF7 563 aa15.7■□□□□ 0.1
CDC42SE2-209ENST00000506419 NXPE3Q969Y0 559 aa15.7■□□□□ 0.1
CDC42SE2-209ENST00000506419 SUSD3Q96L08 255 aa15.7■□□□□ 0.1
CDC42SE2-209ENST00000506419 IKZF4Q9H2S9 585 aa15.7■□□□□ 0.1
CDC42SE2-209ENST00000506419 POLIQ9UNA4 740 aa15.7■□□□□ 0.1
CDC42SE2-209ENST00000506419 CACNA1HO95180 2353 aa15.7■□□□□ 0.1
CDC42SE2-209ENST00000506419 DENND4AQ7Z401 1863 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 TRIP11Q15643 1979 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 VWA8A3KMH1 1905 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 DOCK6Q96HP0 2047 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 A0A0B4J269 797 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 WDR27A2RRH5 827 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 KRBA1A5PL33 1030 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 H0Y858 1186 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 H0YCG3 227 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 SYN3O14994 580 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 SEC24AO95486 1093 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 CFHP08603 1231 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 POU2F2P09086 479 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 LRPAP1P30533 357 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 LIG4P49917 911 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 CLCN5P51795 746 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 ARPP19P56211 112 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 HTR4Q13639 388 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 ENOX2Q16206 610 aaKnown RBP15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 CWF19L1Q69YN2 538 aaKnown RBP15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 PARM1Q6UWI2 310 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 SIX5Q8N196 739 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 FLCNQ8NFG4 579 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 LARP4BQ92615 738 aaKnown RBP15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 DDX12PQ92771 950 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 FGF13Q92913 245 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 FGF14Q92915 247 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 KIF12Q96FN5 646 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 BICD1Q96G01 975 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 INTS4Q96HW7 963 aaKnown RBP15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 PANK2Q9BZ23 570 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 ZHX3Q9H4I2 956 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 FBXL5Q9UKA1 691 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 CDH7Q9ULB5 785 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 NUB1Q9Y5A7 615 aa15.69■□□□□ 0.1
CDC42SE2-209ENST00000506419 MTCL1Q9Y4B5 1905 aaKnown RBP15.68■□□□□ 0.1
CDC42SE2-209ENST00000506419 ARHGEF37A1IGU5 675 aa15.68■□□□□ 0.1
CDC42SE2-209ENST00000506419 MYMKA6NI61 221 aa15.68■□□□□ 0.1
CDC42SE2-209ENST00000506419 TISP43B9A030 160 aa15.68■□□□□ 0.1
CDC42SE2-209ENST00000506419 K7ENM7 598 aa15.68■□□□□ 0.1
CDC42SE2-209ENST00000506419 OGTO15294 1046 aa15.68■□□□□ 0.1
CDC42SE2-209ENST00000506419 GALR2O43603 387 aaPredicted RBP15.68■□□□□ 0.1
CDC42SE2-209ENST00000506419 XYLBO75191 536 aa15.68■□□□□ 0.1
CDC42SE2-209ENST00000506419 KRT18P05783 430 aaKnown RBP15.68■□□□□ 0.1
CDC42SE2-209ENST00000506419 NUBP1P53384 320 aa15.68■□□□□ 0.1
CDC42SE2-209ENST00000506419 RTL10Q7L3V2 364 aa15.68■□□□□ 0.1
CDC42SE2-209ENST00000506419 DYMQ7RTS9 669 aa15.68■□□□□ 0.1
CDC42SE2-209ENST00000506419 ZNF720Q7Z2F6 126 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms