RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 KCNH3Q9ULD8 1083 aa12.46□□□□□ -0.41
SIL1-208ENST00000505945 MRPS23Q9Y3D9 190 aaKnown RBP12.46□□□□□ -0.41
SIL1-208ENST00000505945 MTF2Q9Y483 593 aaPredicted RBP12.46□□□□□ -0.41
SIL1-208ENST00000505945 RBM19Q9Y4C8 960 aaKnown RBP12.46□□□□□ -0.41
SIL1-208ENST00000505945 COL4A3Q01955 1670 aa12.45□□□□□ -0.42
SIL1-208ENST00000505945 KANSL1LA0AUZ9 987 aa12.45□□□□□ -0.42
SIL1-208ENST00000505945 WDR27A2RRH5 827 aa12.45□□□□□ -0.42
SIL1-208ENST00000505945 LAD1O00515 517 aa12.45□□□□□ -0.42
SIL1-208ENST00000505945 ABLIM1O14639 778 aa12.45□□□□□ -0.42
SIL1-208ENST00000505945 MEFVO15553 781 aaPredicted RBP12.45□□□□□ -0.42
SIL1-208ENST00000505945 ABLIM3O94929 683 aa12.45□□□□□ -0.42
SIL1-208ENST00000505945 LMNAP02545 664 aaKnown RBP12.45□□□□□ -0.42
SIL1-208ENST00000505945 RHOP08100 348 aa12.45□□□□□ -0.42
SIL1-208ENST00000505945 SP9P0CG40 484 aa12.45□□□□□ -0.42
SIL1-208ENST00000505945 MCF2P10911 925 aa12.45□□□□□ -0.42
SIL1-208ENST00000505945 HARSP12081 509 aaKnown RBP12.45□□□□□ -0.42
SIL1-208ENST00000505945 KCNE1P15382 129 aa12.45□□□□□ -0.42
SIL1-208ENST00000505945 PTPN2P17706 415 aa12.45□□□□□ -0.42
SIL1-208ENST00000505945 CD72P21854 359 aa12.45□□□□□ -0.42
SIL1-208ENST00000505945 PROZP22891 400 aa12.45□□□□□ -0.42
SIL1-208ENST00000505945 ELF1P32519 619 aa12.45□□□□□ -0.42
SIL1-208ENST00000505945 RAD51AP2Q09MP3 1159 aa12.45□□□□□ -0.42
SIL1-208ENST00000505945 SEZ6Q53EL9 994 aa12.45□□□□□ -0.42
SIL1-208ENST00000505945 SLC8B1Q6J4K2 584 aa12.45□□□□□ -0.42
SIL1-208ENST00000505945 MPZL3Q6UWV2 235 aa12.45□□□□□ -0.42
SIL1-208ENST00000505945 PLIN2Q99541 437 aa12.45□□□□□ -0.42
SIL1-208ENST00000505945 NTPCRQ9BSD7 190 aaKnown RBP12.45□□□□□ -0.42
SIL1-208ENST00000505945 PLA2G2FQ9BZM2 168 aa12.45□□□□□ -0.42
SIL1-208ENST00000505945 SEMA4AQ9H3S1 761 aa12.45□□□□□ -0.42
SIL1-208ENST00000505945 C17orf75Q9HAS0 396 aa12.45□□□□□ -0.42
SIL1-208ENST00000505945 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.45□□□□□ -0.42
SIL1-208ENST00000505945 NUB1Q9Y5A7 615 aa12.45□□□□□ -0.42
SIL1-208ENST00000505945 ARHGEF37A1IGU5 675 aa12.44□□□□□ -0.42
SIL1-208ENST00000505945 FAM170BA6NMN3 283 aa12.44□□□□□ -0.42
SIL1-208ENST00000505945 PRRG1O14668 218 aa12.44□□□□□ -0.42
SIL1-208ENST00000505945 TBC1D4O60343 1298 aa12.44□□□□□ -0.42
SIL1-208ENST00000505945 SEC24AO95486 1093 aa12.44□□□□□ -0.42
SIL1-208ENST00000505945 LRG1P02750 347 aa12.44□□□□□ -0.42
SIL1-208ENST00000505945 RPL9P32969 192 aaKnown RBP12.44□□□□□ -0.42
SIL1-208ENST00000505945 PRPHP41219 470 aa12.44□□□□□ -0.42
SIL1-208ENST00000505945 MRPL58Q14197 206 aaKnown RBP12.44□□□□□ -0.42
SIL1-208ENST00000505945 UBXN2BQ14CS0 331 aa12.44□□□□□ -0.42
SIL1-208ENST00000505945 MLF2Q15773 248 aaPredicted RBP12.44□□□□□ -0.42
SIL1-208ENST00000505945 SLC10A6Q3KNW5 377 aa12.44□□□□□ -0.42
SIL1-208ENST00000505945 MCTP1Q6DN14 999 aa12.44□□□□□ -0.42
SIL1-208ENST00000505945 MAML2Q8IZL2 1156 aaPredicted RBP12.44□□□□□ -0.42
SIL1-208ENST00000505945 DDX23Q9BUQ8 820 aaKnown RBP12.44□□□□□ -0.42
SIL1-208ENST00000505945 CYP4F11Q9HBI6 524 aa12.44□□□□□ -0.42
SIL1-208ENST00000505945 CNTN3Q9P232 1028 aa12.44□□□□□ -0.42
SIL1-208ENST00000505945 ANKFY1Q9P2R3 1169 aa12.44□□□□□ -0.42
SIL1-208ENST00000505945 OTOGLQ3ZCN5 2332 aa12.44□□□□□ -0.42
SIL1-208ENST00000505945 GPR179Q6PRD1 2367 aa12.43□□□□□ -0.42
SIL1-208ENST00000505945 SYN3O14994 580 aa12.43□□□□□ -0.42
SIL1-208ENST00000505945 ATF2P15336 505 aa12.43□□□□□ -0.42
SIL1-208ENST00000505945 CEBPBP17676 345 aa12.43□□□□□ -0.42
SIL1-208ENST00000505945 GUCY2CP25092 1073 aa12.43□□□□□ -0.42
SIL1-208ENST00000505945 ID4P47928 161 aa12.43□□□□□ -0.42
SIL1-208ENST00000505945 PFKPQ01813 784 aa12.43□□□□□ -0.42
SIL1-208ENST00000505945 PRKCQQ04759 706 aa12.43□□□□□ -0.42
SIL1-208ENST00000505945 STRN3Q13033 797 aa12.43□□□□□ -0.42
SIL1-208ENST00000505945 CTXN3Q4LDR2 81 aa12.43□□□□□ -0.42
SIL1-208ENST00000505945 TANGO2Q6ICL3 276 aa12.43□□□□□ -0.42
SIL1-208ENST00000505945 TCEAL8Q8IYN2 117 aa12.43□□□□□ -0.42
SIL1-208ENST00000505945 TMEM130Q8N3G9 435 aa12.43□□□□□ -0.42
SIL1-208ENST00000505945 TMEM161BQ8NDZ6 487 aa12.43□□□□□ -0.42
SIL1-208ENST00000505945 SPIRE2Q8WWL2 714 aa12.43□□□□□ -0.42
SIL1-208ENST00000505945 SUSD3Q96L08 255 aa12.43□□□□□ -0.42
SIL1-208ENST00000505945 TBC1D32Q96NH3 1257 aa12.43□□□□□ -0.42
SIL1-208ENST00000505945 PNMA5Q96PV4 448 aa12.43□□□□□ -0.42
SIL1-208ENST00000505945 CORO1BQ9BR76 489 aa12.43□□□□□ -0.42
SIL1-208ENST00000505945 BCO2Q9BYV7 579 aa12.43□□□□□ -0.42
SIL1-208ENST00000505945 SPATA6Q9NWH7 488 aaPredicted RBP12.43□□□□□ -0.42
SIL1-208ENST00000505945 GDE1Q9NZC3 331 aa12.43□□□□□ -0.42
SIL1-208ENST00000505945 FBXL5Q9UKA1 691 aa12.43□□□□□ -0.42
SIL1-208ENST00000505945 CITO14578 2027 aa12.43□□□□□ -0.42
SIL1-208ENST00000505945 NPHP3-ACAD11A0A0J9YXS1 232 aa12.42□□□□□ -0.42
SIL1-208ENST00000505945 H7C4K7 107 aa12.42□□□□□ -0.42
SIL1-208ENST00000505945 ECI2O75521 394 aa12.42□□□□□ -0.42
SIL1-208ENST00000505945 TOM1L1O75674 476 aa12.42□□□□□ -0.42
SIL1-208ENST00000505945 PLS3P13797 630 aa12.42□□□□□ -0.42
SIL1-208ENST00000505945 MCM4P33991 863 aa12.42□□□□□ -0.42
SIL1-208ENST00000505945 SMTNP53814 917 aa12.42□□□□□ -0.42
SIL1-208ENST00000505945 FOXK2Q01167 660 aa12.42□□□□□ -0.42
SIL1-208ENST00000505945 CACNB1Q02641 598 aaPredicted RBP12.42□□□□□ -0.42
SIL1-208ENST00000505945 SPAG1Q07617 926 aa12.42□□□□□ -0.42
SIL1-208ENST00000505945 PRSS36Q5K4E3 855 aa12.42□□□□□ -0.42
SIL1-208ENST00000505945 HYIQ5T013 277 aa12.42□□□□□ -0.42
SIL1-208ENST00000505945 ZC3H14Q6PJT7 736 aaKnown RBP12.42□□□□□ -0.42
SIL1-208ENST00000505945 TPRG1Q6ZUI0 275 aa12.42□□□□□ -0.42
SIL1-208ENST00000505945 SYT2Q8N9I0 419 aaPredicted RBP12.42□□□□□ -0.42
SIL1-208ENST00000505945 TCEAL4Q96EI5 215 aa12.42□□□□□ -0.42
SIL1-208ENST00000505945 TIPINQ9BVW5 301 aa12.42□□□□□ -0.42
SIL1-208ENST00000505945 AVENQ9NQS1 362 aaPredicted RBP12.42□□□□□ -0.42
SIL1-208ENST00000505945 HEBP1Q9NRV9 189 aa12.42□□□□□ -0.42
SIL1-208ENST00000505945 TUBGCP4Q9UGJ1 667 aa12.42□□□□□ -0.42
SIL1-208ENST00000505945 KCNG1Q9UIX4 513 aa12.42□□□□□ -0.42
SIL1-208ENST00000505945 MIA3Q5JRA6 1907 aa12.42□□□□□ -0.42
SIL1-208ENST00000505945 DCHS1Q96JQ0 3298 aa12.42□□□□□ -0.42
SIL1-208ENST00000505945 F5P12259 2224 aa12.41□□□□□ -0.42
SIL1-208ENST00000505945 VWA3AA6NCI4 1184 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms