RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 TERF2Q15554 542 aa18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 ZNF568Q3ZCX4 644 aa18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 SEL1L2Q5TEA6 688 aa18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 IQSEC1Q6DN90 963 aa18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 GPR142Q7Z601 462 aa18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 PLEKHH3Q7Z736 793 aa18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 EFCAB13Q8IY85 973 aa18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 MREGQ8N565 214 aa18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 HDAC7Q8WUI4 952 aa18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 ANKRD36BP1Q96IX9 119 aa18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 KATNBL1Q9H079 304 aa18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 CNOT8Q9UFF9 292 aaKnown RBP18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 PCDHB4Q9Y5E5 795 aa18.49■□□□□ 0.55
TRAPPC11-204ENST00000505676 ZSWIM8A7E2V4 1837 aa18.48■□□□□ 0.55
TRAPPC11-204ENST00000505676 PTPRJQ12913 1337 aa18.48■□□□□ 0.55
TRAPPC11-204ENST00000505676 BHMG1C9JSJ3 638 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC11-204ENST00000505676 INO80B-WBP1J3KQ70 363 aa18.48■□□□□ 0.55
TRAPPC11-204ENST00000505676 ZEB2O60315 1214 aa18.48■□□□□ 0.55
TRAPPC11-204ENST00000505676 CTNNA1P35221 906 aaKnown RBP18.48■□□□□ 0.55
TRAPPC11-204ENST00000505676 MAP1SQ66K74 1059 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC11-204ENST00000505676 DPP9Q86TI2 863 aa18.48■□□□□ 0.55
TRAPPC11-204ENST00000505676 INO80BQ9C086 356 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC11-204ENST00000505676 NIF3L1Q9GZT8 377 aa18.48■□□□□ 0.55
TRAPPC11-204ENST00000505676 MRPL47Q9HD33 250 aaKnown RBP18.48■□□□□ 0.55
TRAPPC11-204ENST00000505676 LSM8O95777 96 aaKnown RBP18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 INSRRP14616 1297 aa18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 GUCY2DQ02846 1103 aa18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 TRPC3Q13507 836 aa18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 DUSP28Q4G0W2 176 aa18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 ZBTB41Q5SVQ8 909 aa18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 APBB1IPQ7Z5R6 666 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 MCOLN2Q8IZK6 566 aa18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 UBR7Q8N806 425 aa18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 NLRP4Q96MN2 994 aa18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 RAB17Q9H0T7 212 aa18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 APOBEC3GQ9HC16 384 aaKnown RBP18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 EPB41L5Q9HCM4 733 aa18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 SCINQ9Y6U3 715 aa18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 FAM187AA6NFU0 413 aa18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 SART1O43290 800 aaKnown RBP18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 RAD51CO43502 376 aa18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 ZMYND10O75800 440 aa18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 TMEM191BP0C7N4 346 aa18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 GNA15P30679 374 aa18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 GBP1P32455 592 aa18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 ZNF132P52740 706 aa18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 WNT7BP56706 349 aa18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 SLC7A5Q01650 507 aa18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 DHX34Q14147 1143 aaKnown RBP18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 LMBRD2Q68DH5 695 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 PHF13Q86YI8 300 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 RBBP8NLQ8NC74 664 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 OR5B17Q8NGF7 314 aa18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 CD101Q93033 1021 aa18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 ZNF518BQ9C0D4 1074 aa18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 RPF1Q9H9Y2 349 aaKnown RBP18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 PCDHA3Q9Y5H8 950 aa18.47■□□□□ 0.55
TRAPPC11-204ENST00000505676 FGGP02679 453 aa18.46■□□□□ 0.55
TRAPPC11-204ENST00000505676 GLI1P08151 1106 aa18.46■□□□□ 0.55
TRAPPC11-204ENST00000505676 HARSP12081 509 aaKnown RBP18.46■□□□□ 0.55
TRAPPC11-204ENST00000505676 COMTP21964 271 aa18.46■□□□□ 0.55
TRAPPC11-204ENST00000505676 C1QBPQ07021 282 aaKnown RBP18.46■□□□□ 0.55
TRAPPC11-204ENST00000505676 PCBP1Q15365 356 aaKnown RBP eCLIP18.46■□□□□ 0.55
TRAPPC11-204ENST00000505676 TMEM132AQ24JP5 1023 aa18.46■□□□□ 0.55
TRAPPC11-204ENST00000505676 SND1Q7KZF4 910 aaKnown RBP eCLIP18.46■□□□□ 0.55
TRAPPC11-204ENST00000505676 ZBTB33Q86T24 672 aa18.46■□□□□ 0.55
TRAPPC11-204ENST00000505676 ZNF410Q86VK4 478 aa18.46■□□□□ 0.55
TRAPPC11-204ENST00000505676 MAIP1Q8WWC4 291 aa18.46■□□□□ 0.55
TRAPPC11-204ENST00000505676 MAML3Q96JK9 1138 aa18.46■□□□□ 0.55
TRAPPC11-204ENST00000505676 RRN3P2A6NIE6 340 aa18.46■□□□□ 0.55
TRAPPC11-204ENST00000505676 SPOPO43791 374 aa18.46■□□□□ 0.55
TRAPPC11-204ENST00000505676 MYBL2P10244 700 aa18.46■□□□□ 0.55
TRAPPC11-204ENST00000505676 MESDQ14696 234 aa18.46■□□□□ 0.55
TRAPPC11-204ENST00000505676 NT5DC4Q86YG4 428 aa18.46■□□□□ 0.55
TRAPPC11-204ENST00000505676 KLHL7Q8IXQ5 586 aa18.46■□□□□ 0.55
TRAPPC11-204ENST00000505676 SEC14L1Q92503 715 aa18.46■□□□□ 0.55
TRAPPC11-204ENST00000505676 CCDC102AQ96A19 550 aa18.46■□□□□ 0.55
TRAPPC11-204ENST00000505676 RNPEPQ9H4A4 650 aa18.46■□□□□ 0.55
TRAPPC11-204ENST00000505676 ASB7Q9H672 318 aa18.46■□□□□ 0.55
TRAPPC11-204ENST00000505676 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.46■□□□□ 0.55
TRAPPC11-204ENST00000505676 FAM114A2Q9NRY5 505 aa18.46■□□□□ 0.55
TRAPPC11-204ENST00000505676 MTUS1Q9ULD2 1270 aa18.46■□□□□ 0.55
TRAPPC11-204ENST00000505676 NUB1Q9Y5A7 615 aa18.46■□□□□ 0.55
TRAPPC11-204ENST00000505676 MCM3APO60318 1980 aa18.45■□□□□ 0.54
TRAPPC11-204ENST00000505676 OPA1O60313 960 aa18.45■□□□□ 0.54
TRAPPC11-204ENST00000505676 CLCN3P51790 818 aa18.45■□□□□ 0.54
TRAPPC11-204ENST00000505676 TMEM270Q6UE05 265 aa18.45■□□□□ 0.54
TRAPPC11-204ENST00000505676 AFG1LQ8WV93 481 aa18.45■□□□□ 0.54
TRAPPC11-204ENST00000505676 TINF2Q9BSI4 451 aa18.45■□□□□ 0.54
TRAPPC11-204ENST00000505676 C16orf70Q9BSU1 422 aa18.45■□□□□ 0.54
TRAPPC11-204ENST00000505676 PSD3Q9NYI0 1048 aa18.45■□□□□ 0.54
TRAPPC11-204ENST00000505676 RASAL2Q9UJF2 1139 aa18.45■□□□□ 0.54
TRAPPC11-204ENST00000505676 UTP11Q9Y3A2 253 aaKnown RBP18.45■□□□□ 0.54
TRAPPC11-204ENST00000505676 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.45■□□□□ 0.54
TRAPPC11-204ENST00000505676 GOLGA6BA6NDN3 693 aa18.45■□□□□ 0.54
TRAPPC11-204ENST00000505676 SNAI1O95863 264 aaPredicted RBP18.45■□□□□ 0.54
TRAPPC11-204ENST00000505676 CHRNA3P32297 505 aa18.45■□□□□ 0.54
TRAPPC11-204ENST00000505676 PEX5P50542 639 aa18.45■□□□□ 0.54
TRAPPC11-204ENST00000505676 RWDD2BP57060 319 aa18.45■□□□□ 0.54
TRAPPC11-204ENST00000505676 PTP4A2Q12974 167 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms