RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 CDH16O75309 829 aa12.65□□□□□ -0.38
UBE3D-206ENST00000505226 UPP2O95045 317 aa12.65□□□□□ -0.38
UBE3D-206ENST00000505226 ASMTLO95671 621 aa12.65□□□□□ -0.38
UBE3D-206ENST00000505226 FGFR1P11362 822 aa12.65□□□□□ -0.38
UBE3D-206ENST00000505226 SSTR3P32745 418 aaPredicted RBP12.65□□□□□ -0.38
UBE3D-206ENST00000505226 MCCD1P59942 119 aaPredicted RBP12.65□□□□□ -0.38
UBE3D-206ENST00000505226 FASTKD3Q14CZ7 662 aaKnown RBP12.65□□□□□ -0.38
UBE3D-206ENST00000505226 TMED2Q15363 201 aa12.65□□□□□ -0.38
UBE3D-206ENST00000505226 ZYXQ15942 572 aaKnown RBP12.65□□□□□ -0.38
UBE3D-206ENST00000505226 SLC39A4Q6P5W5 647 aa12.65□□□□□ -0.38
UBE3D-206ENST00000505226 POMGNT1Q8WZA1 660 aa12.65□□□□□ -0.38
UBE3D-206ENST00000505226 NUMBLQ9Y6R0 609 aa12.65□□□□□ -0.38
UBE3D-206ENST00000505226 UMODL1Q5DID0 1318 aa12.65□□□□□ -0.38
UBE3D-206ENST00000505226 MYPNQ86TC9 1320 aa12.65□□□□□ -0.38
UBE3D-206ENST00000505226 T-ENOLP0DO92 83 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 MAPTP10636 758 aaKnown RBP12.64□□□□□ -0.39
UBE3D-206ENST00000505226 KRT5P13647 590 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 TARSP26639 723 aaKnown RBP12.64□□□□□ -0.39
UBE3D-206ENST00000505226 SOX10P56693 466 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 ACVR2BQ13705 512 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 IZUMO3Q5VZ72 239 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 ARHGEF18Q6ZSZ5 1173 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 SV2AQ7L0J3 742 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 DENND1AQ8TEH3 1009 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 CNKSR1Q969H4 720 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 PRMT6Q96LA8 375 aaPredicted RBP12.64□□□□□ -0.39
UBE3D-206ENST00000505226 CSRNP1Q96S65 589 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 RIT2Q99578 217 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 TRIM6Q9C030 488 aaPredicted RBP12.64□□□□□ -0.39
UBE3D-206ENST00000505226 RAB20Q9NX57 234 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 MAPK13O15264 365 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 P4HBP07237 508 aaKnown RBP12.64□□□□□ -0.39
UBE3D-206ENST00000505226 ZSCAN5DPP0CG00 497 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 KLRC2P26717 231 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 PLA2G4FQ68DD2 849 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 ERP27Q96DN0 273 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 IFT74Q96LB3 600 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 HAO1Q9UJM8 370 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 GAS8O95995 478 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 ATP2A2P16615 1042 aaKnown RBP12.64□□□□□ -0.39
UBE3D-206ENST00000505226 CNGA1P29973 690 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 CCNHP51946 323 aaPredicted RBP12.64□□□□□ -0.39
UBE3D-206ENST00000505226 MKRN3Q13064 507 aaKnown RBP12.64□□□□□ -0.39
UBE3D-206ENST00000505226 MOGSQ13724 837 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 MIS18BP1Q6P0N0 1132 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 SYDE1Q6ZW31 735 aaPredicted RBP12.64□□□□□ -0.39
UBE3D-206ENST00000505226 LDHDQ86WU2 507 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 AGBL1Q96MI9 1066 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 RBM15Q96T37 977 aaKnown RBP eCLIP12.64□□□□□ -0.39
UBE3D-206ENST00000505226 MRIQ9BWK5 157 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 FHDC1Q9C0D6 1143 aaPredicted RBP12.64□□□□□ -0.39
UBE3D-206ENST00000505226 TMEM8AQ9HCN3 771 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 NKIRAS1Q9NYS0 192 aa12.64□□□□□ -0.39
UBE3D-206ENST00000505226 FAM47DPA6NHR8 397 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 ETS1P14921 441 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 GNAZP19086 355 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 YWHABP31946 246 aaKnown RBP12.63□□□□□ -0.39
UBE3D-206ENST00000505226 MAGEA4P43358 317 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 CCNG1P51959 295 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 NCKAP1LP55160 1127 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 STRN3Q13033 797 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 ATP13A4Q4VNC1 1196 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 TRABD2AQ86V40 505 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 TMEM161BQ8NDZ6 487 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 FBXL13Q8NEE6 735 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 NT5C1BQ96P26 610 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 GLIS2Q9BZE0 524 aaPredicted RBP12.63□□□□□ -0.39
UBE3D-206ENST00000505226 KLHL11Q9NVR0 708 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.63□□□□□ -0.39
UBE3D-206ENST00000505226 SMNDC1O75940 238 aaKnown RBP eCLIP12.63□□□□□ -0.39
UBE3D-206ENST00000505226 TCF4P15884 667 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 CD58P19256 250 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 SKIV2L2P42285 1042 aaKnown RBP12.63□□□□□ -0.39
UBE3D-206ENST00000505226 CCDC15Q0P6D6 951 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 PKN2Q16513 984 aaKnown RBP12.63□□□□□ -0.39
UBE3D-206ENST00000505226 P3H1Q32P28 736 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 PODNQ7Z5L7 613 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 SLC7A6OSQ96CW6 309 aaPredicted RBP12.63□□□□□ -0.39
UBE3D-206ENST00000505226 SPDL1Q96EA4 605 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 FAM167BQ9BTA0 163 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 KIAA1683Q9H0B3 1180 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 ST6GALNAC4Q9H4F1 302 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 KIAA1586Q9HCI6 787 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 TBX20Q9UMR3 447 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 PHTF1Q9UMS5 762 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 TMX2Q9Y320 296 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 ASTN2O75129 1339 aaPredicted RBP12.63□□□□□ -0.39
UBE3D-206ENST00000505226 MAGEB2O15479 319 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 DSG3P32926 999 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 RPA3P35244 121 aaPredicted RBP12.63□□□□□ -0.39
UBE3D-206ENST00000505226 MRPS9P82933 396 aaKnown RBP12.63□□□□□ -0.39
UBE3D-206ENST00000505226 CAV1Q03135 178 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 ALCAMQ13740 583 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 RELL1Q8IUW5 271 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 BSNDQ8WZ55 320 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 ZNF516Q92618 1163 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 PLCD4Q9BRC7 762 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 PLVAPQ9BX97 442 aa12.63□□□□□ -0.39
UBE3D-206ENST00000505226 NFIBO00712 420 aa12.62□□□□□ -0.39
UBE3D-206ENST00000505226 PEX11AO75192 247 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms