RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 SLC27A1Q6PCB7 646 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 TRIM65Q6PJ69 517 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 RPAINQ86UA6 219 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 FAM228AQ86W67 206 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 SLC43A3Q8NBI5 491 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 CCDC112Q8NEF3 446 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 ARNTL2Q8WYA1 636 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 CCDC51Q96ER9 411 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 FAM84AQ96KN4 292 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 TRIM6Q9C030 488 aaPredicted RBP10.11□□□□□ -0.79
TPM3-218ENST00000505010 TTYH3Q9C0H2 523 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 TMEM117Q9H0C3 514 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 GANQ9H2C0 597 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 RPF1Q9H9Y2 349 aaKnown RBP10.11□□□□□ -0.79
TPM3-218ENST00000505010 TMEM8AQ9HCN3 771 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 CEP72Q9P209 647 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 CPSF3Q9UKF6 684 aaKnown RBP10.11□□□□□ -0.79
TPM3-218ENST00000505010 CAPN11Q9UMQ6 739 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 LUC7L2Q9Y383 392 aaKnown RBP10.11□□□□□ -0.79
TPM3-218ENST00000505010 PTPRJQ12913 1337 aa10.1□□□□□ -0.79
TPM3-218ENST00000505010 RBAK-RBAKDNI3L0D1 243 aa10.1□□□□□ -0.79
TPM3-218ENST00000505010 RNF225M0QZC1 329 aaPredicted RBP10.1□□□□□ -0.79
TPM3-218ENST00000505010 P4HA2O15460 535 aa10.1□□□□□ -0.79
TPM3-218ENST00000505010 CAND2O75155 1236 aa10.1□□□□□ -0.79
TPM3-218ENST00000505010 IL18RAPO95256 599 aa10.1□□□□□ -0.79
TPM3-218ENST00000505010 CLTAP09496 248 aa10.1□□□□□ -0.79
TPM3-218ENST00000505010 HOXA11P31270 313 aaPredicted RBP10.1□□□□□ -0.79
TPM3-218ENST00000505010 PIK3CAP42336 1068 aa10.1□□□□□ -0.79
TPM3-218ENST00000505010 POLR2FP61218 127 aaKnown RBP10.1□□□□□ -0.79
TPM3-218ENST00000505010 ZBED6P86452 979 aa10.1□□□□□ -0.79
TPM3-218ENST00000505010 PAK2Q13177 524 aa10.1□□□□□ -0.79
TPM3-218ENST00000505010 EPC2Q52LR7 807 aa10.1□□□□□ -0.79
TPM3-218ENST00000505010 WDR49Q8IV35 697 aa10.1□□□□□ -0.79
TPM3-218ENST00000505010 TMEM192Q8IY95 271 aa10.1□□□□□ -0.79
TPM3-218ENST00000505010 ZNF397Q8NF99 534 aaPredicted RBP10.1□□□□□ -0.79
TPM3-218ENST00000505010 PANX2Q96RD6 677 aa10.1□□□□□ -0.79
TPM3-218ENST00000505010 BAG1Q99933 345 aaPredicted RBP10.1□□□□□ -0.79
TPM3-218ENST00000505010 CCDC94Q9BW85 323 aaPredicted RBP10.1□□□□□ -0.79
TPM3-218ENST00000505010 APOL6Q9BWW8 343 aa10.1□□□□□ -0.79
TPM3-218ENST00000505010 EIF2AQ9BY44 585 aaKnown RBP10.1□□□□□ -0.79
TPM3-218ENST00000505010 SEZ6LQ9BYH1 1024 aa10.1□□□□□ -0.79
TPM3-218ENST00000505010 SIX2Q9NPC8 291 aa10.1□□□□□ -0.79
TPM3-218ENST00000505010 CD320Q9NPF0 282 aa10.1□□□□□ -0.79
TPM3-218ENST00000505010 NLRC4Q9NPP4 1024 aa10.1□□□□□ -0.79
TPM3-218ENST00000505010 PLCB1Q9NQ66 1216 aa10.1□□□□□ -0.79
TPM3-218ENST00000505010 ABHD10Q9NUJ1 306 aa10.1□□□□□ -0.79
TPM3-218ENST00000505010 ZKSCAN5Q9Y2L8 839 aa10.1□□□□□ -0.79
TPM3-218ENST00000505010 FHOD1Q9Y613 1164 aa10.1□□□□□ -0.79
TPM3-218ENST00000505010 LRRC53A6NM62 1247 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 PHACTR2O75167 634 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 NOL4O94818 638 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 PFKMP08237 780 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 TMEM191BP0C7N4 346 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 GHRP10912 638 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 SKILP12757 684 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 ALADP13716 330 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 MSNP26038 577 aaKnown RBP10.09□□□□□ -0.79
TPM3-218ENST00000505010 GRM5P41594 1212 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 MCCD1P59942 119 aaPredicted RBP10.09□□□□□ -0.79
TPM3-218ENST00000505010 CLDN10P78369 228 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 TFAMQ00059 246 aaKnown RBP10.09□□□□□ -0.79
TPM3-218ENST00000505010 NHLH1Q02575 133 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 NFX1Q12986 1120 aaKnown RBP10.09□□□□□ -0.79
TPM3-218ENST00000505010 RAPGEF1Q13905 1077 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 TSR1Q2NL82 804 aaKnown RBP10.09□□□□□ -0.79
TPM3-218ENST00000505010 FBXO47Q5MNV8 452 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 ZNF618Q5T7W0 954 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 KLHDC7AQ5VTJ3 777 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 TDRD10Q5VZ19 366 aaKnown RBP10.09□□□□□ -0.79
TPM3-218ENST00000505010 TWF2Q6IBS0 349 aaKnown RBP10.09□□□□□ -0.79
TPM3-218ENST00000505010 IQCEQ6IPM2 695 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 PDXDC1Q6P996 788 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 GJB7Q6PEY0 223 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 SV2AQ7L0J3 742 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 RRAGAQ7L523 313 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 GPIHBP1Q8IV16 184 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 GJD3Q8N144 294 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 EHBP1Q8NDI1 1231 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 FBXL13Q8NEE6 735 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 TAS1R2Q8TE23 839 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 ZNF516Q92618 1163 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 SCLYQ96I15 445 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 ACAP3Q96P50 834 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 DNAJC7Q99615 494 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 EDEM3Q9BZQ6 932 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 WNT8AQ9H1J5 351 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 NXF3Q9H4D5 531 aaKnown RBP10.09□□□□□ -0.79
TPM3-218ENST00000505010 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.09□□□□□ -0.79
TPM3-218ENST00000505010 ZNHIT6Q9NWK9 470 aaKnown RBP10.09□□□□□ -0.79
TPM3-218ENST00000505010 APEX2Q9UBZ4 518 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 PYCARDQ9ULZ3 195 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 ST3GAL5Q9UNP4 418 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 SCN5AQ14524 2016 aa10.09□□□□□ -0.79
TPM3-218ENST00000505010 TDRD15B5MCY1 1934 aaKnown RBP10.08□□□□□ -0.8
TPM3-218ENST00000505010 EPOPA6NHQ4 379 aa10.08□□□□□ -0.8
TPM3-218ENST00000505010 LACTBL1A8MY62 500 aa10.08□□□□□ -0.8
TPM3-218ENST00000505010 GPR182O15218 404 aa10.08□□□□□ -0.8
TPM3-218ENST00000505010 PMM2O15305 246 aa10.08□□□□□ -0.8
TPM3-218ENST00000505010 HLA-DRAP01903 254 aa10.08□□□□□ -0.8
TPM3-218ENST00000505010 TNNC2P02585 160 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms