RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 TNNI1P19237 187 aa14.36□□□□□ -0.11
PDLIM7-212ENST00000504380 BMPR1AP36894 532 aa14.36□□□□□ -0.11
PDLIM7-212ENST00000504380 CLCNKBP51801 687 aa14.36□□□□□ -0.11
PDLIM7-212ENST00000504380 POU5F1Q01860 360 aaKnown RBP14.36□□□□□ -0.11
PDLIM7-212ENST00000504380 BEST2Q8NFU1 509 aa14.36□□□□□ -0.11
PDLIM7-212ENST00000504380 ENOX1Q8TC92 643 aaKnown RBP14.36□□□□□ -0.11
PDLIM7-212ENST00000504380 ARNTL2Q8WYA1 636 aa14.36□□□□□ -0.11
PDLIM7-212ENST00000504380 CLP1Q92989 425 aaKnown RBP14.36□□□□□ -0.11
PDLIM7-212ENST00000504380 ELMO3Q96BJ8 720 aa14.36□□□□□ -0.11
PDLIM7-212ENST00000504380 ZNF558Q96NG5 402 aa14.36□□□□□ -0.11
PDLIM7-212ENST00000504380 TGS1Q96RS0 853 aaKnown RBP14.36□□□□□ -0.11
PDLIM7-212ENST00000504380 CGRRF1Q99675 332 aa14.36□□□□□ -0.11
PDLIM7-212ENST00000504380 INTS13Q9NVM9 706 aa14.36□□□□□ -0.11
PDLIM7-212ENST00000504380 DPP3Q9NY33 737 aa14.36□□□□□ -0.11
PDLIM7-212ENST00000504380 UBQLN1Q9UMX0 589 aaKnown RBP14.36□□□□□ -0.11
PDLIM7-212ENST00000504380 FAN1Q9Y2M0 1017 aa14.36□□□□□ -0.11
PDLIM7-212ENST00000504380 SLC16A3O15427 465 aaKnown RBP14.35□□□□□ -0.11
PDLIM7-212ENST00000504380 ITGB1P05556 798 aa14.35□□□□□ -0.11
PDLIM7-212ENST00000504380 TMEM191BP0C7N4 346 aa14.35□□□□□ -0.11
PDLIM7-212ENST00000504380 ERVK-21P61565 698 aa14.35□□□□□ -0.11
PDLIM7-212ENST00000504380 PPP3CAQ08209 521 aa14.35□□□□□ -0.11
PDLIM7-212ENST00000504380 BFSP1Q12934 665 aa14.35□□□□□ -0.11
PDLIM7-212ENST00000504380 SURF1Q15526 300 aa14.35□□□□□ -0.11
PDLIM7-212ENST00000504380 EPC2Q52LR7 807 aa14.35□□□□□ -0.11
PDLIM7-212ENST00000504380 DCAF17Q5H9S7 520 aaPredicted RBP14.35□□□□□ -0.11
PDLIM7-212ENST00000504380 CT47A1Q5JQC4 288 aaPredicted RBP14.35□□□□□ -0.11
PDLIM7-212ENST00000504380 FOXR2Q6PJQ5 311 aa14.35□□□□□ -0.11
PDLIM7-212ENST00000504380 CD300LGQ6UXG3 332 aa14.35□□□□□ -0.11
PDLIM7-212ENST00000504380 C1orf127Q8N9H9 656 aa14.35□□□□□ -0.11
PDLIM7-212ENST00000504380 KLHL23Q8NBE8 558 aa14.35□□□□□ -0.11
PDLIM7-212ENST00000504380 C3orf58Q8NDZ4 430 aa14.35□□□□□ -0.11
PDLIM7-212ENST00000504380 TMC2Q8TDI7 906 aa14.35□□□□□ -0.11
PDLIM7-212ENST00000504380 CNOT6LQ96LI5 555 aaKnown RBP14.35□□□□□ -0.11
PDLIM7-212ENST00000504380 FAM161BQ96MY7 647 aa14.35□□□□□ -0.11
PDLIM7-212ENST00000504380 GUCD1Q96NT3 240 aa14.35□□□□□ -0.11
PDLIM7-212ENST00000504380 TMEM175Q9BSA9 504 aa14.35□□□□□ -0.11
PDLIM7-212ENST00000504380 MKNK1Q9BUB5 465 aa14.35□□□□□ -0.11
PDLIM7-212ENST00000504380 SLC38A7Q9NVC3 462 aa14.35□□□□□ -0.11
PDLIM7-212ENST00000504380 FANCLQ9NW38 375 aa14.35□□□□□ -0.11
PDLIM7-212ENST00000504380 MARCH5Q9NX47 278 aa14.35□□□□□ -0.11
PDLIM7-212ENST00000504380 DERAQ9Y315 318 aa14.35□□□□□ -0.11
PDLIM7-212ENST00000504380 C2CD2Q9Y426 696 aa14.35□□□□□ -0.11
PDLIM7-212ENST00000504380 NFE2L3Q9Y4A8 694 aa14.35□□□□□ -0.11
PDLIM7-212ENST00000504380 SPTBN5Q9NRC6 3674 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 I3L4J1 428 aa14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 PODXLO00592 558 aa14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 MAPK13O15264 365 aa14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 KIF4AO95239 1232 aa14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 FGFR1OPO95684 399 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 GCLMP48507 274 aa14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 ALDH7A1P49419 539 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 ZNF165P49910 485 aa14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 HSP90AA2PQ14568 343 aaPredicted RBP14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 NCAPHQ15003 741 aa14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 DUOXA2Q1HG44 320 aa14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 TCERG1LQ5VWI1 586 aa14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 C9orf57Q5W0N0 161 aa14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 INTS8Q75QN2 995 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 WDR49Q8IV35 697 aa14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 DHX40Q8IX18 779 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 SLC39A11Q8N1S5 342 aa14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 CACTINQ8WUQ7 758 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 ANKRD36BP1Q96IX9 119 aa14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 TTYH1Q9H313 450 aaPredicted RBP14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 THAP9Q9H5L6 903 aa14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 ZNF576Q9H609 170 aa14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 CBX8Q9HC52 389 aa14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 ALG13Q9NP73 1137 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.34□□□□□ -0.111e-6■■■■■ 38.5
PDLIM7-212ENST00000504380 AAASQ9NRG9 546 aa14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 SPG21Q9NZD8 308 aa14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 ARMCX3Q9UH62 379 aaPredicted RBP14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 SIX4Q9UIU6 781 aa14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 AGAP1Q9UPQ3 857 aa14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 PCDHB12Q9Y5F1 795 aa14.34□□□□□ -0.11
PDLIM7-212ENST00000504380 XPOTO43592 962 aaKnown RBP14.33□□□□□ -0.12
PDLIM7-212ENST00000504380 FGF18O76093 207 aa14.33□□□□□ -0.12
PDLIM7-212ENST00000504380 CST3P01034 146 aaPredicted RBP14.33□□□□□ -0.12
PDLIM7-212ENST00000504380 TNNC2P02585 160 aa14.33□□□□□ -0.12
PDLIM7-212ENST00000504380 C4BPAP04003 597 aaKnown RBP14.33□□□□□ -0.12
PDLIM7-212ENST00000504380 ITGB3P05106 788 aa14.33□□□□□ -0.12
PDLIM7-212ENST00000504380 KRT19P08727 400 aa14.33□□□□□ -0.12
PDLIM7-212ENST00000504380 CYP3A5P20815 502 aa14.33□□□□□ -0.12
PDLIM7-212ENST00000504380 POLR2BP30876 1174 aaKnown RBP14.33□□□□□ -0.12
PDLIM7-212ENST00000504380 BRCC3P46736 316 aa14.33□□□□□ -0.12
PDLIM7-212ENST00000504380 MYL5Q02045 173 aa14.33□□□□□ -0.12
PDLIM7-212ENST00000504380 IQCB1Q15051 598 aa14.33□□□□□ -0.12
PDLIM7-212ENST00000504380 UPP1Q16831 310 aa14.33□□□□□ -0.12
PDLIM7-212ENST00000504380 TDRD10Q5VZ19 366 aaKnown RBP14.33□□□□□ -0.12
PDLIM7-212ENST00000504380 LRSAM1Q6UWE0 723 aa14.33□□□□□ -0.12
PDLIM7-212ENST00000504380 TAS1R1Q7RTX1 841 aa14.33□□□□□ -0.12
PDLIM7-212ENST00000504380 TRAPPC11Q7Z392 1133 aa14.33□□□□□ -0.12
PDLIM7-212ENST00000504380 FRMD5Q7Z6J6 570 aa14.33□□□□□ -0.12
PDLIM7-212ENST00000504380 LUZP1Q86V48 1076 aa14.33□□□□□ -0.12
PDLIM7-212ENST00000504380 FBXO22Q8NEZ5 403 aa14.33□□□□□ -0.12
PDLIM7-212ENST00000504380 GDPD5Q8WTR4 605 aa14.33□□□□□ -0.12
PDLIM7-212ENST00000504380 RSPH1Q8WYR4 309 aa14.33□□□□□ -0.12
PDLIM7-212ENST00000504380 IGSF21Q96ID5 467 aa14.33□□□□□ -0.12
PDLIM7-212ENST00000504380 COLEC11Q9BWP8 271 aa14.33□□□□□ -0.12
PDLIM7-212ENST00000504380 VN1R3Q9BXE9 311 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms